Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is dnaE

Identifier: 114562463

GI number:

Start: 1519083

End: 1522559

Strand: Direct

Name: dnaE

Synonym: Sfri_1285

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562462

Following gene: 114562464

Centisome position: NA

GC content: NA

Gene sequence:

>3477_bases
ATGTCCGATCCTCGTTTTGTTCATTTGCGCGTCCACAGTGATTATTCAATGTCAGATGGCGTTGCTAAAGTTAAACCTAT
TATTGCTGCTGCTGAAAATCAGGGGATGGCAGCAATAGCGTTAACTGATCAAAACAACTTTTGTGGTTTGGTTAAGTTTT
ATGGTGCTTGTAATGGTGCGGGAATTAAGCCGATCATTGGCGCCGATTTTTGGGTGCAAACCCCTGGATTTGAAAAAGAA
TTCTGTGCCTTAACCATTATCGCGATGAACAATGAAGGTTACCAAAACCTGACCCAACTGATCAGTGAAGCCTATCTTCG
CGGTCATGTTGATAACCGTGTGGTGATCGACCAAGATTGGTTAGTCAAATACAACAGCGGTTTGATCATTATCTCGGGGG
CCAAAGATGGCGATGTCGGCAAAGCATTATTAAAAGGTAATCAAAACCAAGTCGAGTCGTTGATTGCCTTTTATCAACAA
CACTTTGAAGACCGCTATTACCTAGAGCTTATTCGTACTGGCCGAGCACATGAAGAGCGCTATTTACACATGGCGGTTGA
GTTAGCATCAATAAAAGGTTTACCTGTTGTTGCCACCAACCAAGTGGTGTTTTTAAAACAAGATGATTTTGAAGCCCATG
AAATCCGGGTCGCTATTCATGATGGTTTTACTTTAGTCGATCCACGTCGCCCTAAAACCTATAGCGATCAACAATATCTG
CGCACCGAAGATGAAATGATTGCATTATTTGCTGATATTCCGTCAGCAATTCAAAACAGCGTTGAAATAGCGAAACGCTG
TAATGTCACCATTCGCCTAAATGAATACTTTTTGCCTAATTTCCCTACCGGTGACTTATCCATTGAAGATTTCTTGGTTA
ACGTGTCCGTTAAAGGCTTAGAAGAACGTCTTGAGTTTTTATTTCCAAACCCACAAGTTCGAGCCGAAAAGCGGGGCGAA
TATGACGAACGTCTCGAGATTGAATTAAAGGTAATTAACCAGATGGGTTTCCCTGGTTACTTCCTTATCGTGATGGAGTT
TATTCAGTGGGGCAAAGACAACGGCATTCCAGTTGGTCCCGGCCGTGGTTCTGGTGCGGGATCGTTAGTCGCATACGCGC
TTAAAATTACCGACTTAGATCCACTAGAATACGATTTACTGTTCGAACGTTTCTTGAACCCTGAACGTGTATCCATGCCC
GATTTCGACGTCGACTTTTGTATGGACCGACGCGATGAAGTCATTGACCACGTAGCAGAACTATACGGTCGAGAAGCGGT
ATCACAGATTATTACCTTTGGTACCATGGCGGCCAAAGCCGTTGTGCGCGATGTTGGCCGCGTATTAGGTCATCCTTACG
GGTTTGTTGAACGTCTAACTAAATTAATCCCCGCAGAACCAGGGATGACATTGGCGAAAGCCTTTGAAGTTGAACCCGCG
CTGCCTGAAGCCTATGACGGTGATGAAGACGTTAAAGAGCTTATCGATATGTGTCGCCGCTTAGAAGGGGTAACACGTAA
CGCGGGTAAGCATGCCGGTGGTGTGGTTATCGCCCCGACTCGAATTACCGACTTTGCACCGTTATATTGCGATGCCGAAG
GCTTAAACCCCGTTACACAATTTGACAAAAATGACGTTGAAACTGCTGGTCTGGTTAAGTTCGATTTCTTGGGCTTACGT
ACCTTAACCATTATTGATTGGGCATTGCAGATGATTAATCCGCGCCTGATTAAAGAAGGTAAAGACCCCGTTAGTATCGA
AGCCATTCCGCTTGCCGATCCTGCTTGTTTTAGATTACTGCAACGCTACGAAACAACCGCGGTATTCCAGCTGGAATCTC
GCGGTATGAAAGACCTGATTAAACGTCTGCAACCCGACTGTTTTGAAGACATGATTGCGCTCGTGGCACTTTTCCGCCCA
GGTCCTTTGCAGTCAGGCATGGTTGACAACTTTATTGAACGTAAGCACGGCCGTGAAGAAGTGTCATATCCAGATGCTGA
ATATCAGCATGAGTCACTAAGAGAGTTATTGTCACCGACCTACGGCATTATTTTGTACCAAGAGCAGGTGATGCAGATTG
CTCAGGTATTGTCGGGTTACACCCTAGGCGGCGCGGATATGCTCCGTCGTGCAATGGGTAAGAAAAAACCTGAAGAAATG
GCCAAGCAGCGCGGCACGTTTAAAGAAGGTGCAATTAACAACGGCGTCGACGGCGACTTGTCGATGAAAATCTTCGACTT
GGTGGAAAAGTTCGCCGGTTACGGTTTTAACAAATCGCATTCTGCCGCTTATGCACTGGTGTCGTATCAAACGTTATGGT
TAAAAACCCATTTCCCATCGCAGTTTATGGCCGCGGTAATGTCTGCCGACATGGACAACACCGACAAAATCGTCACCTTG
GTTGATGAATGTGAACGCATGGGCTTGCCGCTAATTCCGCCTGACGTAAACAAAGGCTTATTCAAGTTTACGGTCGATGA
CGACCTCAATATTGTTTATGGTATCGGTGCGATTAAAGGCGTGGGTGAAGGTCCGGTAGATTCTATTTTAGAAGCCCGTA
AAAATGGACCGTTTACCGACCTGTTCGATTTTTGTGCTCGAATTGATTTGAAAAAGCTCAACAAGCGAGTGATTGAAAAG
CTTATCCTTGCAGGCGCCTTAGACACATTAGGCCCGCATCGAGCATCAATGATGGCGACCTTGCCTCAAGCGATTAGTGC
AGCGGCGCAACATGCTAAAGCAGAAGCGACTGGTCAAAATGACATGTTTGGTTTACTCAATAGTGAACCTGAAGACAGTA
AGCAAAACTTTGTCCATTGTACTCCGTGGCCAGACAAAATTTGGTTGGAAGGTGAGCGCGAAACATTAGGGCTTTACCTT
ACTGGTCACCCCATTAATCAGTATTTAAAAGAACTTAAGCAATACACTAATGGCCGCTTAAAAGACATTCACCCAACCGA
GCGCGGTAAAACCGTTAAAGCGGCTGGTCTAGTGGTGGCTACGCGTGTGATGATCACTAAGCGTGGCTCAAAAATGGGCT
TAGTCACATTAGATGACAAAAGTGCTCGCCTAGAGGTGATGCTATTTACCGAGCCGTTTGAGAAGTTTGGTCATATGCTT
GAAAAAGACCGCATTCTTATTTGTGAAGGTGATGTCAGTTTTGATGATTTCTCTGGCGGCAATCGCATGAACGCCCGTAA
TATCATTGAAATTGGCGAAGCACGCAGTCACTTTGCCAAAGCGGTTGAAATCAATGTTCATGGCGATGATGTCACGCCTG
ACTGGTTACAAACCTTTGAGCAAACATTAACACCGTGGCGTAAGGGCGCCGTGCCTGTGGTGATTAACTACACCAAACAA
CAAGCCAGCGGCAAAATCGTGTTAGGTGAAGAGTGGCGAGTTAACCCTAGTGATGAGTTAATGTTAGCCCTCGAAAGCAT
GCTTGGTTCAACTAACGTCAAAATCGTGTTTAATTAG

Upstream 100 bases:

>100_bases
ATTAAACGAGTTTATCGTTGGATAACGTCGCTTAGTTTGGTAGTCTAAATCCCGCATTTTCGTGTTGTTTCATTCATCTT
TTTCGAAGAAAAAATATTCT

Downstream 100 bases:

>100_bases
GCGCGCATCATGATTGAAAAGTCTTCGTTAACAGAGCAAATAAGTGCACCACAACTGCTAAGTTTGCTCGAACAAGCGAT
ATTACCCCTTTATCAAATGA

Product: DNA polymerase III subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1158_residues
MSDPRFVHLRVHSDYSMSDGVAKVKPIIAAAENQGMAAIALTDQNNFCGLVKFYGACNGAGIKPIIGADFWVQTPGFEKE
FCALTIIAMNNEGYQNLTQLISEAYLRGHVDNRVVIDQDWLVKYNSGLIIISGAKDGDVGKALLKGNQNQVESLIAFYQQ
HFEDRYYLELIRTGRAHEERYLHMAVELASIKGLPVVATNQVVFLKQDDFEAHEIRVAIHDGFTLVDPRRPKTYSDQQYL
RTEDEMIALFADIPSAIQNSVEIAKRCNVTIRLNEYFLPNFPTGDLSIEDFLVNVSVKGLEERLEFLFPNPQVRAEKRGE
YDERLEIELKVINQMGFPGYFLIVMEFIQWGKDNGIPVGPGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMP
DFDVDFCMDRRDEVIDHVAELYGREAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVERLTKLIPAEPGMTLAKAFEVEPA
LPEAYDGDEDVKELIDMCRRLEGVTRNAGKHAGGVVIAPTRITDFAPLYCDAEGLNPVTQFDKNDVETAGLVKFDFLGLR
TLTIIDWALQMINPRLIKEGKDPVSIEAIPLADPACFRLLQRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRP
GPLQSGMVDNFIERKHGREEVSYPDAEYQHESLRELLSPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFKEGAINNGVDGDLSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPSQFMAAVMSADMDNTDKIVTL
VDECERMGLPLIPPDVNKGLFKFTVDDDLNIVYGIGAIKGVGEGPVDSILEARKNGPFTDLFDFCARIDLKKLNKRVIEK
LILAGALDTLGPHRASMMATLPQAISAAAQHAKAEATGQNDMFGLLNSEPEDSKQNFVHCTPWPDKIWLEGERETLGLYL
TGHPINQYLKELKQYTNGRLKDIHPTERGKTVKAAGLVVATRVMITKRGSKMGLVTLDDKSARLEVMLFTEPFEKFGHML
EKDRILICEGDVSFDDFSGGNRMNARNIIEIGEARSHFAKAVEINVHGDDVTPDWLQTFEQTLTPWRKGAVPVVINYTKQ
QASGKIVLGEEWRVNPSDELMLALESMLGSTNVKIVFN

Sequences:
NA

Specific function: NA

COG id: COG0587

COG function: function code L; DNA polymerase III, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA