| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
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Identifier: 114562399
GI number:
Start: 1439246
End: 1447108
Strand: Reverse
Name: Not Available
Synonym: Sfri_1221
Alternate gene names: NA
Gene position: NA
Preceding gene: 114562400
Following gene: 114562398
Centisome position: NA
GC content: NA
Gene sequence:
>7863_bases ATGAGCCAATCCAGTAATAAAGATAAGCGTTTAAACAAACGCTTAAAAGACATGCCTATCGCGATTGTCGGCATGGCAAG TATTTTTGCTAACTCACGTTACCTAAACAAGTTTTGGGATTTAATCAGCGAAAAAATTGATGCGATTATCGACGTTCCAG AAAGCCATTGGAATGCTGAAGATTACTACAATGCCGATAAATCAATGGCCGATAAAAGCTACTGTAAGCGCGGTGGTTTT TTACCGGAAGTCGATTTCAATCCAATGGAATTTGGCCTGCCACCTAATATCCTCGAACTAACAGACACCTCACAACTATT ATCGTTAGTGGTCGCCAAAGAAGTGCTGGCAGATGCAGGTATTGATGCACAGTACGATACCGATCGCATCGGTATTACAT TAGGTGTCGGCGGTGGTCAAAAAATCAATCATAGCCTCAGCGGTCGCTTACAGTACCCAATACTCAAAAAAGTATTTAAA AATAGTGGTCTAAGTGATGAAGACACTGAGATGTTGATCAAAAAGTTTCAGGATCAATATATTCACTGGGAAGAAAACTC ATTTCCAGGTTCACTCGGCAATGTAATTGCAGGGCGTATCGCTAACCGCTTTGATCTAGGCGGCATGAATTGCGTGGTTG ACGCAGCTTGTGCCGGTTCTTTAGCGGCAATGCGCATGGCGATTACAGAATTAGTTGAAGGCCGCAGTGACATGATGATC ACCGGTGGTGTGTGTACCGATAACTCGCCATCTATGTACATGAGCTTTTCAAAAACACCGGCATTTACCACCAACGACAC CATTCAACCTTTTGACATTGATTCAAAAGGCATGATGATAGGTGAAGGTATTGGCATGATGGCGCTTAAACGTCTTGATG ATGCCGAACGTGATGGTGACCGAATTTATGCTGTTATTAAAGGTATTGGCTCATCATCAGATGGTAAGTTTAAAAGTATT TATGCACCGCGCCCTGAAGGCCAAGCTAAAGCATTAAGACGCGCTTATGATGATGCAGGTTTTGCGCCGCAAACTGTTGG CTTAATTGAAGCCCATGGTACTGGTACTGCAGCAGGTGATGTTGCGGAGTTCAATGGCCTAAAGTCGGTGTTTGCAGACG GTAATGACACTCAACAGCATATTGCTCTTGGGTCTGTTAAATCGCAAGTTGGCCACACTAAATCAACCGCAGGAACCGCT GGTGTGATTAAAGCGGCTCTGGCTTTGCATCATAAAGTGTTGCCACCGACCATTAACGTCAGTAAACCGAATCCCAATTT AAACATTCAAGATTCGCCATTTTATTTAAACACCGAAACCCGCCCTTGGTTACCTCGTGCAGACAATACGCCGCGCCGCG CGGGTATTAGTGCATTTGGTTTTGGTGGCACCAACTTCCACATTGTGTTGGAAGAATATCGCCAAGAACATGTTCGAGGC GATAAGTATCGTCAACGCTCAGTACCACAAAGTCTATTGATCCATGCTGAAAATAAAGCTGCATTACAGGCTCAATTAAC CGCCCTGCAAACTGAAATTAAGGCTGTTGATACCACACAGCAAAATCGCCAAGAAATTGTATTAGCCGATTTTGGTAAAC GTTTTGCCTTAAATACCATCGCCCCTAATGCGGCACGTATAGGCTTAGTGGTTGCTTCATTAGCAGACTTAACCATTCAG CTGACTCAGGCGCTTGCGCAGTTAAGCTCAAATACTGCCGACAGCTGGCAATTGCCTTCTGGTACCAGTTATCGCGCAGC AGCATTGATTCATCCTGAAGCGGCAAGCCATAAAGTGGCAGCACTATTTGCTGGGCAAGGGGCACAATATCTGAACATGG GCGCCGATTTAGCCTGTTTGTATCCAGAAATGCGTCAACAACTGATGCAAGCAGACAAGGTGTTTGCGCAACATAAACAA ACGCCACTATCGCAAATTATGTACCCAAACCCTGCTTTTGAAGCCGAAGATATTGCCGCACAACAGGCAGCATTAACCAA TACAGCCAATGCCCAGAGTGCTATTGGCGCGGTCAGCATGGGCCAATATGCATTATTGACTCAAGCAGGTTTTAAAGCCG ATATGGTTGCTGGCCATAGTTTTGGTGAACTGTCAGCATTATGTGCTGCAGGCGTCATTAGCCAAGCTGATTATTACCAA TTGGCCTTCGCTCGTGGCCAAGCAATGGCGGCAACACCTAAAGATCAAGACGCTGGCGTAATGTACGCCATTATTGTCCC AGCTCAATCTGTTGACAACGGAGTTGAAAAGCTTGAACAGTGCATTAGTGCATTTGAAGGCGTCAAGGTGGCTAATTACA ATGCACCAACCCAACTGGTTATTGCAGGCCCAACAGCGTCATGTACCTTAGCGGCACAAGCTATCACCACCGAACTTGGT TTTAAAGCAATAGCCCTGCCGGTTTCTGGTGCGTTCCACACTCCATTAGTGGCACATGCGCAGCAGCCGTTTGCTGCGGC AATCAATAAGATTAAATTTGCTAAGCCAAAACTAAGCCTTTATGCCAATGGCACAGGTAAAGCACATCCTAACGATGCTA AAGCAATCCAAGCAGTATTTAGTGAACATATGTTGCAATCGGTTCGTTTTAGCGAGCAACTAAATGCCATGTATGATGCT GGTGCTCGTGTATTTGTTGAGTTTGGTCCTAAGAATATCCTCCACAAGTTGGTTGAAGCGACCCTAGGCAACAAAGCAGA GTCAGTAAGTGTAGTGAGCTTGAACCCAAATCCTAAAGGCAATAGTGACACTCAACTACGCCAAGCGGCTTGTCAGCTTG CAGTATTAGGTGTTGCATTAACCGAGGTTGATCCATATCAAGCGCCTATCGCTGAGCTTGCAAAAGTGTCACCGATGAAC GTTAAGTTAACCGCGAGTAATTATATTAGTCCCGCCACTCAAGCCAAAATGCAAAAATCATTGCAAACTGGCACCGTTAC CAGCCAGACAGTGGAAGTGCCTGTCGAAAAAGTTGTGGAAAAGATTGTGGAAAAAGAAGTCATTAAAACTGAATATATTG AAGTGCCTGCAGCACAAGCTCAAGCCTCTGCAGTCGCCGCACCTTTAGCGGCAACGACTCCTGTAGCTAAAGCTCAACCG GTTAGCTTAAGTGTACCAGCGTCGGCCGATAGTATCGGTGCATTTTTTGCTGCGCAGCAACAAACAGCTGAATTACATCA GCAGTTTTTAGCCATACCACAGCAATATGGCGACACCTTTGCTCACCTGATGACAGCCCAAGCACAAATGGCGTCATCGG GATTAGCCATTCCAGAAAGCTTGCAACGTTCGATGGAGATGTTCCACCAGCATCAAGCACAAACATTGCAAAGTCATACC CAATTTTTAACGCAGCAAGCACAAGCAAACCAAGCCGCATTAGCCATGTTGCAAGGGCAAACGGTAACACCTTCAATACA AGCAACAGTATCTGTACCTGCTCCATCAGTACAGCCTGCATTTGTGCAGCCAAGCCAAGTTGCTCAAGCCACAACGACAC CTTCACCTGTCGTAGCTCCTGTTGCTCAGGTTCAAACAACTCAAGCGGTTCAATCACAACCAACAGCCAGTAAACCTGTC CAGGCTCCTGTCGCTCAGCAAGTTAGCTCAGCAGCGGTTTCTGCACCAACAGCCGGACTAACACAGCAACAAGTGTTAGA CACTATGCTCAATGTAGTTGCTGACAAAACTGGTTACCCAACAGAAATGCTTGAACTTGGCATGGACATGGAAGCAGACC TTGGTATCGACTCAATCAAGCGGGTCGAAATCTTAGGCACAGTACAAGATGAGCTTCCAGGCTTACCAGAACTGAGCCCA GAAGATCTAGCCGAGTGTCGCACCTTGGGCGAAATCGTTAGCTACATGCAAACCAAATTACCAGCGGCCAACTCGGTTGC TGCAGCGTCAACGGGATCAACATCGGTAGTTACTGCAGCACCAGCATCAACAGGCTTAACGGCTGAAAACGTCCAACGTA CCATGTTAGCTGTGGTTGCCGATAAAACCGGTTACCCAACTGAAATGCTTGAACTGGGCATGGACATGGAAGCAGACCTT GGTATCGACTCCATCAAGCGTGTGGAAATTTTAGGCACAGTACAAGATGAGCTTCCAGGTTTACCTGAACTGAGCCCAGA AGATTTAGCTGAGTGTCGCACCTTGGGTGAAATCGTTAGCTACATGCAAACTAAACTGCCTGCTGCCAGCACAGTGGCTG CAGCACCAATTGCATCTGCAGCGCCAGCAACAGGCTTAAGTGCAGAAAGCGTTCAGCGTACTATGTTAGCTGTGGTTGCC GATAAAACCGGTTACCCAACTGAAATGCTTGAACTGGGCATGGACATGGAAGCCGACCTTGGTATCGACTCAATTAAACG CGTTGAAATTCTCGGCACAGTGCAAGACGAGCTCCCTGGTTTGCCTGAACTGAATCCAGAAGATTTAGCCGAGTGTCGCA CCTTAGGCGAAATCGTCAGCTACATGCAAACTAAATTACCTGCTGTCAGCACATTGGCTCCAGTAGCAATTGTATCTGCA CCTGCAACTTCGGGCTTGAGTGCTGATACAGTATTAAGCACCATGATGTCAGTAGTAGCCGACAAAACCGGTTACCCTGC TGAAATGCTTGAACTGAGCATGGACATGGAAGCCGACCTTGGTATCGATTCAATCAAACGTGTTGAAATTCTAGGCACAG TGCAAGACGAACTACCAGGTTTACCTGAGCTGAACCCAGAAGATTTAGCCGAGTGTCGTACCTTGGGCGAAATAGTTAGC TACATGCAAACCAAATTGCCTGCAACCAACACTGAGGCCCCAGTATCTGCTCCAGCAACACCAGGATTAAGTGCTGATAC CGTTTTAAGCACCATGATGTCAGTGGTAGCCGACAAAACAGGTTACCCTGCAGAAATGCTTGAACTGAGCATGGACATGG AAGCCGATTTAGGTATCGACTCAATCAAACGCGTCGAGATTTTAGGTACTGTGCAAGATGAGCTTCCAGGCTTACCTGAG TTGAACCCAGAAGATTTAGCCGAATGTCGCACCCTAGGTGAAATCGTTTGTTACATGCAAACCAAATTGCCTGCAGCAAA CGCGATTGCGCCGGTCGCACCAACATCAACTGCAAACAAGGTTGACGTTAACACCGCAGCATTACCTCCACACAGCGAGG TAGCGCTAAAAAAGTTACCAGCGGCGGATAAACTCGTAGATTGCTTTTCAACAGACTCTTGTATTGTCATCACAGACGAT GGCCACAGTGCAGGTTTACTAGCAGAAAAGCTAAATGCAAAGGGATTAACCGTCGCCGTTATTCGTAACCCACAAACCAT TACCGTGGCACATTCACCCTTAAGCAGTGATATTAAAAGCTACACGTTGAGCAGCATTGATGATGCCCAAATTGCACAAG TGATTGCCGATATTAAGGCCGACTTGGGCGCTGAACATGCCATTGCGGGCTTTATTCATTTACAGCCGCAAGCTACCGCT AACAGCAGCGAATTAATGTCGTGCACTGTTGCAGCAAAAGCCGCTGTCGACAACGCGTTTTTGTGGGCTAAGCATCTTCA CGCTGAGTTTGCAAAACCAGCTCAAGCTTCGCGTTTATGCTACTTTACCGTGAGCCGTTTAGACGGTGGATTTGGTTATC TTGATAATACTCAGCTCGCAACAGCTGAGCTTAACCAAGCAGCCTTATCTGGTCTGAGTAAAACCCTAAGCCATGAATGG CCACAGGTGTTTTGCCGCGCATTAGACATTGCCAACAATATTGATACTACAAGCTTTGCCGATGCCATCGTTGCTGAGTT ATTTGATATCGATGGTGCCAATGCTAGCGCGGATCGCATTAATGAAGTGGGGATCAGTAATCAAGGTCGAGTCACTTTAG TTGCCGAAAATGCCAGCGAGCAGTTTGCACCAGCAAGCCTAAACAAAAGTGACACTATTTTGGTCACCGGCGGCGCAAAA GGCGTAACGTTTGAATGCGCCCTCACCTTAGCCAAACAATGCCAATCACATTTTGTGTTAGCGGGTCGTAGCCAACATTT TGGCAAAGACTTACCAGCTTGGGCACAAGGCAAAAAAGCCTCTGAGTTAAAAGCCGCAGCCATCGCTTATATTCAATCTC AAGGCAATAAACCAACGCCAAAACAGATTGATGCACTCGTATGGCCAATAAGCAGCAGCCTAGAAATAGATGCTGCGTTA AACGCATTCAGCAAGGTTGGTGCCAGTGCTCAATATGTCTCGATGGATGTCAGCAATGCCACCGCGGTAGCTGCCAGCCT TAATAGCCTGACTAATACCAAGGGCGACTCATTAACCATTAATGGGATTATTCACGGTGCTGGCGTGTTAGCCGATAAGC ACATTCAAGATAAAACCTTGGATGAACTTAACCGCGTATACCACACCAAAGTGACTGGGCTTGCTAGCATTATTAATGCA CTCGACCCACAGCAGATTAAGCTTATTGCACTGTTTTCATCGGCGGCCGGTTTTTACGGTAATACCGGACAGAGTGATTA CGCTATGTCGAATGAAATCCTCAATAAAACCGCACTGAAACTAGCGCACACTTTACCGCAAGCTAAAGTGATGAGTTTTA ATTGGGGCCCTTGGGATGGCGGTATGGTCAGTTCAGCATTAAAGAAAATGTTTGTTGAACGTGGCGTTTACGTTATTCCA CTACAAGCAGGTGCCGAGTTATTTGCCCACAGTTTATTAAGCCAACAAGGGGCACAACTGCTTATTGGCTCTGATATGCA AGGTTCATCAGAGCAGGACAACGCTGTAAAAAAGCTTAATGCGGACGCTTTGCTTATTGCTAAGGGTTCGCTGACATTTG CTACTAATACACTTGTGACTAAAGCATTTACGGCTAACGCAGTTACGACTGAGGCAGTTACGACTAAGTCATCGGCTACT GATATTATCAGTCAGACGGTGACACGAGTATTAACCCCAGCTGAAATGCCTTTTGTTAGCGATCATTGTATTGCTGGCAA TCCGGTATTACCCACGGTATGCGCCATGCAATGGATGCGTGATGCGGCAGAAACGTTATGTCATGTGCCTGTCAGTATTG CTGAATACAAATTGCTTAAAGGGGTTATTTTTGACACCAATGAGCCACATTTGTTGCAACTGGCACTAACGCAAACTGAC GCGGGGATCAGCGCGCTGATCTCCTCTCGTTTGTTAAGCGATCCAAGCGCCGCCATGAAACCGCAATACCAAGCTCAATT GGTGATCAATAAGGCGATATTGGCAGCTGATGTTGCTAAACCGATTATTGGCGACAACAGTTTGGCTCAATGGGCCAACA TGACGCCATTGTATTCAGGCGCTGAACTGTACCAAAACGGAACCTTATTTCATGGCCCACGTTTGCAAGGCATTGCTCAA GTGTTGGCATTTGATGATGCTCAGCTACTGTGCCGAGTGCAATTGCCGCAGATTAATGCCACAGACTGCCAAGGTTTTAT CCCGTCATCGGTATTAGGTGGTAGCCAAATTTTCGCTGAAGATTTGCTACTACAAGCCATGCTGGTATGGGCAAGACTGA AATACGATGCTGCAAGTTTACCGTCAACAACCGGTGAGTGTGTTACTGCTTGGCCATTGGCAAATGGTGATAAAGGTTAT ATTCAACTTGATGTAGTTAAGCACAGCGGCAGAATGCTCGTGGCTAACGTGAGTTTATATCATCAAGACGGCCGCCTGAG TTGCCAAATGCTCAATGCTAAAGTAACCATTAGTAAGAGTTTGAATGGGGCATTTATTCCACATCAAGCTTCTGCAGAAC TATCACACAAGGACACCGTGTGA
Upstream 100 bases:
>100_bases CCCGGAGCAAGTCAACCAGCAGCAGTATCCACTAGCACCATTGATGCAGCTGGATCCCAACACCAGATAACTGAACCTCA GTTATCAAACGGAGACTCAT
Downstream 100 bases:
>100_bases CAGCCACAGATAACATGGCGCTAAAATCCATTAGTGAGCGTATTTTGCAGCAACAAACCAAGCCAATGCGCTTGGCTTTG TTGCTGAGCGACCCCAATAT
Product: beta-ketoacyl synthase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>2620_residues MSQSSNKDKRLNKRLKDMPIAIVGMASIFANSRYLNKFWDLISEKIDAIIDVPESHWNAEDYYNADKSMADKSYCKRGGF LPEVDFNPMEFGLPPNILELTDTSQLLSLVVAKEVLADAGIDAQYDTDRIGITLGVGGGQKINHSLSGRLQYPILKKVFK NSGLSDEDTEMLIKKFQDQYIHWEENSFPGSLGNVIAGRIANRFDLGGMNCVVDAACAGSLAAMRMAITELVEGRSDMMI TGGVCTDNSPSMYMSFSKTPAFTTNDTIQPFDIDSKGMMIGEGIGMMALKRLDDAERDGDRIYAVIKGIGSSSDGKFKSI YAPRPEGQAKALRRAYDDAGFAPQTVGLIEAHGTGTAAGDVAEFNGLKSVFADGNDTQQHIALGSVKSQVGHTKSTAGTA GVIKAALALHHKVLPPTINVSKPNPNLNIQDSPFYLNTETRPWLPRADNTPRRAGISAFGFGGTNFHIVLEEYRQEHVRG DKYRQRSVPQSLLIHAENKAALQAQLTALQTEIKAVDTTQQNRQEIVLADFGKRFALNTIAPNAARIGLVVASLADLTIQ LTQALAQLSSNTADSWQLPSGTSYRAAALIHPEAASHKVAALFAGQGAQYLNMGADLACLYPEMRQQLMQADKVFAQHKQ TPLSQIMYPNPAFEAEDIAAQQAALTNTANAQSAIGAVSMGQYALLTQAGFKADMVAGHSFGELSALCAAGVISQADYYQ LAFARGQAMAATPKDQDAGVMYAIIVPAQSVDNGVEKLEQCISAFEGVKVANYNAPTQLVIAGPTASCTLAAQAITTELG FKAIALPVSGAFHTPLVAHAQQPFAAAINKIKFAKPKLSLYANGTGKAHPNDAKAIQAVFSEHMLQSVRFSEQLNAMYDA GARVFVEFGPKNILHKLVEATLGNKAESVSVVSLNPNPKGNSDTQLRQAACQLAVLGVALTEVDPYQAPIAELAKVSPMN VKLTASNYISPATQAKMQKSLQTGTVTSQTVEVPVEKVVEKIVEKEVIKTEYIEVPAAQAQASAVAAPLAATTPVAKAQP VSLSVPASADSIGAFFAAQQQTAELHQQFLAIPQQYGDTFAHLMTAQAQMASSGLAIPESLQRSMEMFHQHQAQTLQSHT QFLTQQAQANQAALAMLQGQTVTPSIQATVSVPAPSVQPAFVQPSQVAQATTTPSPVVAPVAQVQTTQAVQSQPTASKPV QAPVAQQVSSAAVSAPTAGLTQQQVLDTMLNVVADKTGYPTEMLELGMDMEADLGIDSIKRVEILGTVQDELPGLPELSP EDLAECRTLGEIVSYMQTKLPAANSVAAASTGSTSVVTAAPASTGLTAENVQRTMLAVVADKTGYPTEMLELGMDMEADL GIDSIKRVEILGTVQDELPGLPELSPEDLAECRTLGEIVSYMQTKLPAASTVAAAPIASAAPATGLSAESVQRTMLAVVA DKTGYPTEMLELGMDMEADLGIDSIKRVEILGTVQDELPGLPELNPEDLAECRTLGEIVSYMQTKLPAVSTLAPVAIVSA PATSGLSADTVLSTMMSVVADKTGYPAEMLELSMDMEADLGIDSIKRVEILGTVQDELPGLPELNPEDLAECRTLGEIVS YMQTKLPATNTEAPVSAPATPGLSADTVLSTMMSVVADKTGYPAEMLELSMDMEADLGIDSIKRVEILGTVQDELPGLPE LNPEDLAECRTLGEIVCYMQTKLPAANAIAPVAPTSTANKVDVNTAALPPHSEVALKKLPAADKLVDCFSTDSCIVITDD GHSAGLLAEKLNAKGLTVAVIRNPQTITVAHSPLSSDIKSYTLSSIDDAQIAQVIADIKADLGAEHAIAGFIHLQPQATA NSSELMSCTVAAKAAVDNAFLWAKHLHAEFAKPAQASRLCYFTVSRLDGGFGYLDNTQLATAELNQAALSGLSKTLSHEW PQVFCRALDIANNIDTTSFADAIVAELFDIDGANASADRINEVGISNQGRVTLVAENASEQFAPASLNKSDTILVTGGAK GVTFECALTLAKQCQSHFVLAGRSQHFGKDLPAWAQGKKASELKAAAIAYIQSQGNKPTPKQIDALVWPISSSLEIDAAL NAFSKVGASAQYVSMDVSNATAVAASLNSLTNTKGDSLTINGIIHGAGVLADKHIQDKTLDELNRVYHTKVTGLASIINA LDPQQIKLIALFSSAAGFYGNTGQSDYAMSNEILNKTALKLAHTLPQAKVMSFNWGPWDGGMVSSALKKMFVERGVYVIP LQAGAELFAHSLLSQQGAQLLIGSDMQGSSEQDNAVKKLNADALLIAKGSLTFATNTLVTKAFTANAVTTEAVTTKSSAT DIISQTVTRVLTPAEMPFVSDHCIAGNPVLPTVCAMQWMRDAAETLCHVPVSIAEYKLLKGVIFDTNEPHLLQLALTQTD AGISALISSRLLSDPSAAMKPQYQAQLVINKAILAADVAKPIIGDNSLAQWANMTPLYSGAELYQNGTLFHGPRLQGIAQ VLAFDDAQLLCRVQLPQINATDCQGFIPSSVLGGSQIFAEDLLLQAMLVWARLKYDAASLPSTTGECVTAWPLANGDKGY IQLDVVKHSGRMLVANVSLYHQDGRLSCQMLNAKVTISKSLNGAFIPHQASAELSHKDTV
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA