| Definition | Shewanella frigidimarina NCIMB 400, complete genome. |
|---|---|
| Accession | NC_008345 |
| Length | 4,845,257 |
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Identifier: 114562319
GI number:
Start: 1343377
End: 1347258
Strand: Direct
Name: Not Available
Synonym: Sfri_1141
Alternate gene names: NA
Gene position: NA
Preceding gene: 114562317
Following gene: 114562320
Centisome position: NA
GC content: NA
Gene sequence:
>3882_bases ATGGAAATCATTCGCGGAGCCCCAGCACTATCTGCATTTAGAGTTCAAAAACTCATGGAGGCTTGCGAAAACGCAGCGCT TCCTGTTTCTCAAATTTATGCTGAATATGTACATTTAGCCAGTTTGAGTGAACCACTAGATGATAATGAACGTCTACAGT TAGAAACTATTCTTACTTATGGCCCAGCTATTGAGTCTCATGCCCCACAAGGCACTTTACTGTTTGTTACTCCTCGTCCT GGCACTATTTCTCCTTGGTCTTCTAAAGCAACCGACATTGCTCATAACTGTGGTTTAGGCAAAGTTAGCCGTCTTGAACG TGGTATTGCTTATTATGTTGAAGCGTCAGTATTAACCGCAGAACAACAAAAACTACTGCAAGGGTTATTACATGACCGTA TGGTCGAAGTGATGCTGCCAGCGTTTGAAGCTGCTGAAGTATTATTTGCTCGTACAGAACCGGCAAAATTTAGCAGTGTG AATATTCTTGCTGAAGGCCGCCGCGCATTAGAAGTGGCCAACATTAAGCTAGGCTTGGCCCTTGCCGATGATGAGATTGA CTATTTAATTGAAAATTTTGTTCGTTTAAAGCGTAACCCTAACGACATCGAATTAATGATGTTTGCTCAAGCAAACTCGG AACATTGTCGCCACAAAATTTTCAATGCAGATTGGACAATCGATGGTGAAGTACAGCTAAAGTCATTGTTCAAAATGATT AAAAACACCTTTGAAGTGACACCTGATTACGTGTTATCAGCTTACAAAGATAATGCTGCGGTGATGACAGGTTCTGTTGC GGGACGTTTTTTCCCTGATCCCGATGGTATTTACAACTATCACACCGAGCCAATGCATATATTGATGAAAGTCGAAACGC ACAATCATCCTACTGCAATTAGTCCATATCCTGGTGCGGCTACTGGCTCAGGTGGTGAAATTCGCGATGAGGGTGCTACT GGCCGAGGTTCTAAACCTAAAGCAGGTTTGTCTGGCTTTACTGTTTCTAACTTAAAAATTCCTGGTTTTGTACAACCATG GGAAGGGGATTACGGTAAGCCAGATCGTATTGTCACACCGTTAGAAATTATGCTCGAAGGCCCACTTGGCGGCGCAGCAT TTAACAACGAATTTGGTCGTCCTGCCATTACCGGTTATTTCCGCACCTACGAGCAATTAGTCTCTAGCCATAATGGTGTT GAAGTACGCGGATATCATAAGCCGATTATGATTGCTGGTGGCTTAGGCAATATCCGTGAAGATCATGTTCAAAAAGGCGA AATTACCATTGGTGCTAAGCTCATTGTGCTTGGCGGACCGGCAATGAACATTGGCTTAGGCGGTGGTGCTGCATCTTCAA TGGCATCTGGTCAATCTAGCGAAGATTTAGATTTTGCTTCTGTACAACGTGAAAACCCAGAAATGGAACGTCGTTGTCAG GAAGTTATCGATCGCTGTTGGCAATTAGGTGACACAAACCCAATTCAATTTATTCACGATGTGGGCGCAGGCGGATTATC TAATGCATTCCCTGAGTTAGTGAATGATGCTGATCGCGGCGGGGTATTCAATTTACGTAATGTTCCCTCAGACGAGCCAG GCATGAGCCCGCTTGAAATTTGGTGTAATGAATCACAAGAACGTTATGTATTATCGGTTGCACCAGAGAACTTGCAACAG TTTGCTGATATTTGTGCCCGTGAACGCGCGCCATTTGCCGTGGTTGGTGAAGCGACAGCAGAGATGCATTTAACGCTTGC CGACAGCCATTTTAACAACAAGCCGATTGATTTACCGCTTGAAGTTTTATTGGGTAAAGCGCCTAAGATGAGCCGTGATG TGGTAACTGCCAAAGCAGTATCGCCAGCGTTAGATCAAACTAAAATTGAGCTAAAAGATGCTGTTAAGCGCATTTTAACC TTGCCAACAGTGGCAGACAAAACCTTCCTTATCACCATTGGTGATCGCTCCGTTACTGGTTTAGTGAATCGCGATCAAAT GGTGGGTCCATGGCAGGTTCCAGTTGCCGACTGCGCAGTAACCGCATCAAGTTATGACAGTTACTGCGGTGAAGCGATGT CGATGGGTGAGCGTACTCCGTTAGCCTTACTCGACTTTGACGCCTCAGCCCGCATGGCGGTTGCCGAATCGATTATGAAC ATTGCTGGTACTGACATTGGCTCGTTCAAGCGTATTAAGCTTTCTGCTAACTGGATGTCTCCAGCGGGTCACCCTGGTGA AGATGCGGGTTTATACCAAGCCGTTAAAGCGATTGGTGAAGACCTTTGTCCTGAACTTGGTATAACAATTCCTGTTGGCA AAGACTCCATGTCGATGAAAACCGCATGGGAAGATAACGGCACTCAGAAAACCGTCACATCGCCTATGTCGTTAGTCATC ACTGCCTTTGGTGTAGTACAAGACATTCGTAAAACGGTAACGCCACAGCTTCGCAGTGATAAAGGTGATAGTGCTTTATT AATGCTGGACCTAAGCAATGGCCAAAACCGTTTAGGCGGTTCTTGTTTAGCGCAGGTTTACAGTGAGTTAGGTGACATTG CACCAACATTGGATAAAACCGCTAACTTAGCTGGCTTTTTTGAAGTGATGCAGCAACTCGTAGCCGATCAAGCGGTTATG GCTTATCACGATCGTAGTGATGGCGGTTTATTTACCACTCTCGTGGAAATGGCTTTTGCTGGTAATACCGGGTTAACAAT TGATTTAGCCAGCTTGAGTGGTACTGATTTAGAACGTTTATTTAACGAAGAAATTGGTGCTGTAATTCAAGTCAGTGCTA TTGATGCTAAAGCCATTGCCGCGCAATTTGAAGCTAAAGGCGTAACGTGTCATCACATCGGTGGTTTGCAAACGGCTGAC AAAATTAGCATTAATGACGGCGAGCGAGTCATATTTGCTGACAGCCGTACTGCACTGCGTACCTTATGGTCAGAAACAAC CTATCGCATGCAAGCGCTACGTGACAATCCGGAATGTGCGCGTGAAGAATATGAGCTTAAACAACAAGCTGATGCGCCAG GTTTAACGGTTAAATTAGGCTTTAATCCAAGTGAAGATGTCGCCGCACCTTATATCCTTAAAGGTGTCGCACCTAAAATG GCTATTTTACGTGAGCAAGGCGTTAACTCTCATGTTGAAATGGCAGCCGCTTTTGACCGTGCCGGTTTTGAAAGTCGCGA CGTGCACATGTCGGACATTTTATCTGGTCGAATTAGTTTAGAAGAATTCCAAGGCCTAGTGGCATGTGGCGGCTTCTCTT ACGGTGACGTGTTAGGCGCTGGTGAAGGTTGGGCTAAATCGATTTTGTTTAATGATCGTGCTCGCGACGAGTTTAGCCGT TTCTTCGAACGTGATTCAAGCATCGCCCTTGGCGTGTGTAATGGTTGTCAGATGTTATCTAACCTGAAAGAAATTATTCC AGGAAGTGAGCATTGGCCACGTTTTGTGCGTAACCGTTCTGAGCGTTTTGAAGCTCGATTCAGTTTGGTTGAAGTGCAAC AAAATCCATCGGTATTTTTTGAAGGCATGGTCGGTTCTCGTATGCCTATCGCAGTATCGCATGGTGAAGGCTTAGTTGAA TTTGCCAATGCTCAAGCGTTAGCAAATGCAGAAGCATCGGGCACTATTGCACTGCGCTATGTTGATGGTCATGGTCAAAT TGCGACCCAGTACCCAGAAAACCCAAATGGTTCTGCTAATGGCTTAACTGGTATCTGTACCACTGATGGTCGCGTAACAA TTATGATGCCGCATCCTGAGCGTGTATTCAGAACCGTTGCCAATTCATGGCATCCAGATAATTGGGGTGAAGATAGCCCA TGGATGCGTATGTTCCGTAATGCACGAGTGAAGATTGGTTAA
Upstream 100 bases:
>100_bases AACACTGTTTTCACCGGTGCTTGAAGGTGATTTGTAGTGTGCAATTCCCTATAATAGCGCCAATTCTGATCCTCCTATAT TATAAAGGTGAATAGACGTG
Downstream 100 bases:
>100_bases TAGCAAATCATGCACTTAGTTTAGCAAAATCACTTGATTTAGTTAAATTACTTAATGTAACTAAAGCGAAAGGCGACTCC GTTGAGTCGCCTTTTTTATT
Product: phosphoribosylformylglycinamidine synthase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1293_residues MEIIRGAPALSAFRVQKLMEACENAALPVSQIYAEYVHLASLSEPLDDNERLQLETILTYGPAIESHAPQGTLLFVTPRP GTISPWSSKATDIAHNCGLGKVSRLERGIAYYVEASVLTAEQQKLLQGLLHDRMVEVMLPAFEAAEVLFARTEPAKFSSV NILAEGRRALEVANIKLGLALADDEIDYLIENFVRLKRNPNDIELMMFAQANSEHCRHKIFNADWTIDGEVQLKSLFKMI KNTFEVTPDYVLSAYKDNAAVMTGSVAGRFFPDPDGIYNYHTEPMHILMKVETHNHPTAISPYPGAATGSGGEIRDEGAT GRGSKPKAGLSGFTVSNLKIPGFVQPWEGDYGKPDRIVTPLEIMLEGPLGGAAFNNEFGRPAITGYFRTYEQLVSSHNGV EVRGYHKPIMIAGGLGNIREDHVQKGEITIGAKLIVLGGPAMNIGLGGGAASSMASGQSSEDLDFASVQRENPEMERRCQ EVIDRCWQLGDTNPIQFIHDVGAGGLSNAFPELVNDADRGGVFNLRNVPSDEPGMSPLEIWCNESQERYVLSVAPENLQQ FADICARERAPFAVVGEATAEMHLTLADSHFNNKPIDLPLEVLLGKAPKMSRDVVTAKAVSPALDQTKIELKDAVKRILT LPTVADKTFLITIGDRSVTGLVNRDQMVGPWQVPVADCAVTASSYDSYCGEAMSMGERTPLALLDFDASARMAVAESIMN IAGTDIGSFKRIKLSANWMSPAGHPGEDAGLYQAVKAIGEDLCPELGITIPVGKDSMSMKTAWEDNGTQKTVTSPMSLVI TAFGVVQDIRKTVTPQLRSDKGDSALLMLDLSNGQNRLGGSCLAQVYSELGDIAPTLDKTANLAGFFEVMQQLVADQAVM AYHDRSDGGLFTTLVEMAFAGNTGLTIDLASLSGTDLERLFNEEIGAVIQVSAIDAKAIAAQFEAKGVTCHHIGGLQTAD KISINDGERVIFADSRTALRTLWSETTYRMQALRDNPECAREEYELKQQADAPGLTVKLGFNPSEDVAAPYILKGVAPKM AILREQGVNSHVEMAAAFDRAGFESRDVHMSDILSGRISLEEFQGLVACGGFSYGDVLGAGEGWAKSILFNDRARDEFSR FFERDSSIALGVCNGCQMLSNLKEIIPGSEHWPRFVRNRSERFEARFSLVEVQQNPSVFFEGMVGSRMPIAVSHGEGLVE FANAQALANAEASGTIALRYVDGHGQIATQYPENPNGSANGLTGICTTDGRVTIMMPHPERVFRTVANSWHPDNWGEDSP WMRMFRNARVKIG
Sequences:
NA
Specific function: NA
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA