Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is alaS

Identifier: 114562241

GI number:

Start: 1252831

End: 1255455

Strand: Direct

Name: alaS

Synonym: Sfri_1063

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562240

Following gene: 114562242

Centisome position: NA

GC content: NA

Gene sequence:

>2625_bases
ATGTTTCAGACTACAGCAGAGTTAAGAAGCGCTTTTTTAAAGTACTTTGAAGATAACGGACATCAGGTTGTTGATAGCAG
CTCGCTTGTTCCCACAAATGACCCAACACTGTTATTCACCAATGCGGGTATGAACCAGTTTAAAGATGTGTTCCTCGGCA
TGGATAAACGCAATTACACTCGAGCGACAACATCTCAACGTTGTGTGCGCGCGGGTGGCAAACATAACGATTTAGATAAC
GTGGGTTATACCGCTCGTCACCATACTTTCTTTGAAATGTTAGGTAACTTTAGTTTCGGTGATTATTTCAAAGAAGATGC
AATTCGTTTTGCATGGACCTTTTTAACTGAAACGCTCAAGCTGCCAAAAGAACGCCTCTGCGTGACTATTTATGAAACCG
ATGATGAAGCATATGATCTTTGGACTCAAAAAATAGGTGTGCCAGCAGAAAACATGATCCGCATTGGTGATAATAAAGGC
GGAGCTTTTGCGTCAGATAACTTCTGGCAGATGGGTGATACCGGTCCTTGTGGTCCTTGTAGTGAGATTTTCTACGACCA
TGGCGATCATATATGGGGTGGCCGCCCAGGTACGCCTGAAGAAGACGGTGATCGCTTTATTGAAATTTGGAACATTGTCT
TTATGCAGTACAACCGTCAAGCCGACGGTGAAATGTTGCCATTGCCAAAACCTTCTGTTGATACAGGTATGGGTATTGAG
CGAATTGCTGCGATTATGCAAGGCGTGCATTCAAACTACGAAATCGATATTTTTAAACAACTTATTGCCAAAACTGCTGA
AATTATCGGTGTAACTGATTTAGAAAATAAATCTCTGCGTGTTATTGCTGACCACATTCGTTCATGTGCATTTTTAATTG
CTGATGGTGTAATGCCATCAAATGAAGGTCGTGGTTATGTGTTGCGTCGTATTATTCGTCGCGCAGTTCGCCATGGTAAC
AAGCTTGGCGCTAATGACGCATTTTTCTACAAACTTGTGCCAACACTTATTAGCGTAATGGGCGATGCCGCCATTGGCTT
AAAACAAACTCAAGCTATTGTTGAAAAAGCCTTAAAAGCGGAAGAGGAGCAGTTTGCTCGCACTCTTGAGCGCGGTTTAG
TTATTTTAGATGGCGCATTGAATAGCTTGCAAGGTGATACTTTAGACGGCGACACCTTATTTAAACTTTATGACACCTAT
GGCTTCCCTGTTGATTTAACTGCAGATGTTTGTCGTGAACGTGATATTAACGTTGATGAAGCTGGCTTTGAGTCTGCAAT
GGCTGAACAAAGAAGCCGTGCACAAGCTGCAGGTAACTTTGGTGCTGATTATAATAGCCAATTAATTATCGACGCAGAAA
CCGCATTCAGTGGTTATACAGAGTTAACTGGTCAGCCTAATGTGATTGCTTTATATGTTGACGGTAAAGCGGTTGATACC
GTGAAAGCGGGTCAGGATGCCGTAGTAGTATTAGACAATACTCCATTTTATGCAGAATCTGGTGGGCAGGTTGGTGATAA
AGGCCTGCTGACAGCAGATGGTGTAGTATTTACCGTTGCAGACACTCAAAAATTTGGTCCAGCTACAGGTCACCAAGGTC
AACTAGCTCAAGGTCAGTTAGTGATCGGGCAACAGTTAACCGCGCAGGTGGATAAAAAGTTACGCCATCGTACGCAATTG
AATCATTCTGTTACTCACTTATTGCATGCTGCATTACGTCAAGTGTTAGGCTCACATGTGTCTCAAAAGGGTTCACTTGT
TAATCCTGAACGCTTACGCTTTGACTTTGCTCATTTTGAAGCGGTTAAGCCATCAGAATTGAAAGCTGTTGAAGACTTGG
TTAACACCCAAATTCGTCGCAACCATGAACTTTGTACCGCCGAAATGGCCATTGATGAAGCCAAAGAAAAAGGTGCAATG
GCATTATTTGGTGAGAAATACGATGACCAAGTACGTGTTGTCACTATGGGGGATTTCTCTATCGAACTGTGTGGTGGTAC
TCACGTTGGCCGCACTGGTGATATTGGTTTATTTAAAATTACTTCTGAGAATGGCATTGCCGCAGGAGTACGTCGTATTG
AAGCTGTTACGGGGATTGCTGCAATGGCTTATATTGCCGAGCAGCAAGCCATGTTAGATGAAGCTGCACAACTACTGAAG
TCCGATAGTGCTTCAGTTGTGGTCAAGTTAAAAGCTCAGCTAGATAAAGTGAAGCAATTAGAAAAAGATTTATCCCAATT
AAAAGATAAGTTAGCTGCTGCGGCCAGTGCCGATATGGCAGGTGATGCGGTAGAAATTAATGGTGTTAAACTTTTAGTTA
AACAGCTTGATGGTATTGATCCTGGTTCACTTCGTGGATTACAAGATGAGCTGAAGCAAAAGTTAAAATCTGCGATTATT
GTGCTAGGTACTGCTAAAGACGGTAAAGTTAATTTAATTGCTGGTGTCAGCAACGATTTAACCAAAAAGGTCAAAGCGGG
TGAGTTAGTTGCAATGGTTGCACAACATGTTGGCGGTAAGGGCGGTGGACGTCCTGATATGGCACAAGCTGGTGGAACTC
AGCCTGAGAATTTAGCCGCAGCATTAGCCCTTGTAGAGCCCTGGGTAAACGAACGTTTAAGTTAA

Upstream 100 bases:

>100_bases
CATCTCGCACATTGACGTAAATTCAGTATATAATGCTTACATTTACAGGCTTGCATGCCAAGCTCGTTACTTTCGTATTT
TCTATATTCAGGGCCATTTC

Downstream 100 bases:

>100_bases
TGAAATCTGTAGATTAGCGTTTTTTTTGGCAATTGAGTCATAAAGTCTAAGATATGCGACTTTATGACTTGAGTGCTATG
AGTAGATTTGGCATAGTGAA

Product: alanyl-tRNA synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>874_residues
MFQTTAELRSAFLKYFEDNGHQVVDSSSLVPTNDPTLLFTNAGMNQFKDVFLGMDKRNYTRATTSQRCVRAGGKHNDLDN
VGYTARHHTFFEMLGNFSFGDYFKEDAIRFAWTFLTETLKLPKERLCVTIYETDDEAYDLWTQKIGVPAENMIRIGDNKG
GAFASDNFWQMGDTGPCGPCSEIFYDHGDHIWGGRPGTPEEDGDRFIEIWNIVFMQYNRQADGEMLPLPKPSVDTGMGIE
RIAAIMQGVHSNYEIDIFKQLIAKTAEIIGVTDLENKSLRVIADHIRSCAFLIADGVMPSNEGRGYVLRRIIRRAVRHGN
KLGANDAFFYKLVPTLISVMGDAAIGLKQTQAIVEKALKAEEEQFARTLERGLVILDGALNSLQGDTLDGDTLFKLYDTY
GFPVDLTADVCRERDINVDEAGFESAMAEQRSRAQAAGNFGADYNSQLIIDAETAFSGYTELTGQPNVIALYVDGKAVDT
VKAGQDAVVVLDNTPFYAESGGQVGDKGLLTADGVVFTVADTQKFGPATGHQGQLAQGQLVIGQQLTAQVDKKLRHRTQL
NHSVTHLLHAALRQVLGSHVSQKGSLVNPERLRFDFAHFEAVKPSELKAVEDLVNTQIRRNHELCTAEMAIDEAKEKGAM
ALFGEKYDDQVRVVTMGDFSIELCGGTHVGRTGDIGLFKITSENGIAAGVRRIEAVTGIAAMAYIAEQQAMLDEAAQLLK
SDSASVVVKLKAQLDKVKQLEKDLSQLKDKLAAAASADMAGDAVEINGVKLLVKQLDGIDPGSLRGLQDELKQKLKSAII
VLGTAKDGKVNLIAGVSNDLTKKVKAGELVAMVAQHVGGKGGGRPDMAQAGGTQPENLAAALALVEPWVNERLS

Sequences:
NA

Specific function: NA

COG id: COG0013

COG function: function code J; Alanyl-tRNA synthetase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA