Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562227

GI number:

Start: 1234926

End: 1237196

Strand: Direct

Name: Not Available

Synonym: Sfri_1049

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562226

Following gene: 114562228

Centisome position: NA

GC content: NA

Gene sequence:

>2271_bases
ATGCACACTATGCCATGTGCATATGGTTGGATGTCAGTCGGTCATGCGGCTAAGGAAGGGTTCATGGTATCTGTTCGCGA
AGCACATTTTAATACGCAAGCATTCCAATTAGATGAGTGGGTCGCTCGTTATCTCGACGACAAAGATGATGCTCAGAAGT
TATTGGTATTGATCCAGCAAGTTGAGGCCCTACCGGTTAAAAACAAACTGGCTCATACTGAACTGCTTGCGCGCGCTCGC
GAAATGATCGAAATCTTAGCGCCGCTGAATATGGACATCGAAACGCTACAAGCCGCAGTATTATTTTTGCTATTCGATGC
GGGTGTTCTCAACGAAGAGCAAATTCTAGAGCAATACGGTGAAAACCTTGCAAGGTTAGTTGCCAGCGTTGTGACCATGA
ATGCCATTGGCGCATTAAAAGTCAGTCAAAATTCGCGCGATGCCGAACCTCAAATAGATAACATCCGAAAAATGTTATTG
GCCATGGTTGAAGATGTTCGTGCCGTAGTGATCAAATTAGCCGAACGTGTATGCTTACTGCGTGCGGTAAAAAACGCCGA
TGAAGAAACTCGGGTATTATTAGCACGAGAAATTGCTGATATTTATGCGCCATTAGCAAATCGCTTAGGCATTGGTCAAT
TAAAGTGGGAGCTTGAAGATATTTCTTTTCGCTATTTGCATCCAACCGTTTATAAAGACATTGCTAAACAGCTTGATGGT
AAGCGTGTCGACCGAGAAGTGTTTATCGACAAGTTTGTCACCCAGTTACAGCAACGTTTAGATAGCGATGATATTCGCGC
CAAAGTGTACGGTCGCCCAAAACACATTTACAGTATTTGGCGAAAAATGAAGGGCAAAGATCTCAAGTTTGATGAGCTTT
TTGACGTTCGTGCAGTGCGTATTGTCACCGAAAGATTACAAGATTGCTATGGCGCGTTAGGGGTTGTACATGACCTTTGG
CACCATATTCCGCGTGAGTTTGACGATTACGTAGCAAATCCAAAACCGAACGGCTATCAATCTATTCATACAGTAGTCGT
AGGTCCTGAAGGCAAAACAGTAGAAATTCAAATTCGTACTGAGGCGATGCATCAAGATTCTGAGCTTGGCGTTGCCGCGC
ACTGGAAATACAAAGAAGGTGCCAGTAATACCAAACAAACGGGTTACGAAGAAAAAATTAACTGGTTGCGTAAAATTTTA
CAGTGGCAAGAAGATGTCGCTGAAAGTGGTAATTTGGTTGACGAAGTCCGTAGCCAAGTATTTGAAGACCGAGTCTATGT
ATTTACCCCAAGTGGTGAAGTTGTTGACTTACCTTTAGGCTCAACTGTACTCGACTTTGCTTATTATATTCACTCTCAAG
TGGGTCATAAATGTATTGGTGCAAAAGTCGACGGCCGCATTGTGCCATTCACGTACCAAGTTGAAACGGGTGAGCGCATT
GAGATTATCACTTCAAAAACGCCTAACCCAAAACGTGACTGGCTCAATCTTAATTTAGGCTATATCAAGTCGTCTCGTTC
GCGTTCAAAAATTCAACACTGGTTTAAGCAACAAGACCGCGATAAAAATATTGCCGCGGGTAAAGAGATGCTTGAGTCTG
AATTAGCCCGAGTAGGTCTTAAAATTAAAGATGCAGCAGTGGCGGTAGAGCGCTTTAATTTAAACACTATGGATGACATG
CTAGCAGCCATCGGTGGGGGTGATTTACGCTTAAATCAAGTGGTTAACTTTACCGATACCAAAATTCGCAAAGTAGAAGA
CACTGACGAAAACTTACTTGAAGATATTATAAAGAAAGCGTCGCATAAGCCTAAAAAGTCGAGTAAAGGCCAAGTCGAAG
TTAATGGTGTGGGTAATTTAATGAGCCACATTGCGCGTTGTTGCCAACCCGTTCCCGGCGATGAAATATTTGGTTATATT
ACTATGGGGCGGGGGATTTCTGTGCACCGTAGTGATTGCGAACAAGTGAAAGAATTAATGCGTGCTCACCCAGAACGCAG
TGTCGATGTGATTTGGGGTGAGAACTATTCTGGTGGTTATCGTATTCGCGTTAGAGTACTTGCCCATGATCGCAGTGGTT
TATTACGAGATTTAACCACAGTGCTAGCGGCGGAGAAATCCAATGTGATGGCGATGAGTTCATCTTCTGATGTTAAGAGC
CAAACCGCCACCGTAGAGCTTGAACTTGAATTGTATAATTTAGATGGTTTATCACGGATTCTCGGTAAACTGTCGCTCGT
TGATGGTGTGATTGAGTCGCGTCGATTATAA

Upstream 100 bases:

>100_bases
ACGATAGATATGCTAAAAAATTGGCCAACTGAACGCTATTGAATTGACAAAAGAATATAGCGCTTCAAGATAGGTTGTTC
AGTTGGTGTTAACACCATTT

Downstream 100 bases:

>100_bases
CGTAATTAACATCATGGACTTACCTTGAAGGCATCTACTTGTTAGGTGCCTTTTTCATTAGATTTTATCTTTACAAGAGA
GGACCGTTTCTGTGGCAGAT

Product: (p)ppGpp synthetase I, SpoT/RelA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>756_residues
MHTMPCAYGWMSVGHAAKEGFMVSVREAHFNTQAFQLDEWVARYLDDKDDAQKLLVLIQQVEALPVKNKLAHTELLARAR
EMIEILAPLNMDIETLQAAVLFLLFDAGVLNEEQILEQYGENLARLVASVVTMNAIGALKVSQNSRDAEPQIDNIRKMLL
AMVEDVRAVVIKLAERVCLLRAVKNADEETRVLLAREIADIYAPLANRLGIGQLKWELEDISFRYLHPTVYKDIAKQLDG
KRVDREVFIDKFVTQLQQRLDSDDIRAKVYGRPKHIYSIWRKMKGKDLKFDELFDVRAVRIVTERLQDCYGALGVVHDLW
HHIPREFDDYVANPKPNGYQSIHTVVVGPEGKTVEIQIRTEAMHQDSELGVAAHWKYKEGASNTKQTGYEEKINWLRKIL
QWQEDVAESGNLVDEVRSQVFEDRVYVFTPSGEVVDLPLGSTVLDFAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERI
EIITSKTPNPKRDWLNLNLGYIKSSRSRSKIQHWFKQQDRDKNIAAGKEMLESELARVGLKIKDAAVAVERFNLNTMDDM
LAAIGGGDLRLNQVVNFTDTKIRKVEDTDENLLEDIIKKASHKPKKSSKGQVEVNGVGNLMSHIARCCQPVPGDEIFGYI
TMGRGISVHRSDCEQVKELMRAHPERSVDVIWGENYSGGYRIRVRVLAHDRSGLLRDLTTVLAAEKSNVMAMSSSSDVKS
QTATVELELELYNLDGLSRILGKLSLVDGVIESRRL

Sequences:
NA

Specific function: NA

COG id: COG0317

COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA