Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562197

GI number:

Start: 1194719

End: 1197328

Strand: Direct

Name: Not Available

Synonym: Sfri_1019

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562193

Following gene: 114562198

Centisome position: NA

GC content: NA

Gene sequence:

>2610_bases
ATGAAAGGTGAGAACAAAAGAAGTCCATCAAGTTTAGTCAAGTCTGATGTCATTGAAACTTTGCTTGGCCTCAACAGTGA
GGATGATGTCGATCTGTTCGAAGCAGCAATCGAAGAAGTCACTGAACGCAGACATGCAGAAGAGGCATTGTTAAATGCAG
GTGCGTTGCAGCGAGCAATTTTTAATAGCGCTAACTTCTCTTGTATTGCCACTGATGCTAAAGGGGTCATCCAAATTTTT
AACGTTGGTGCCGAGCGGATGCTAGGTTATTCGGCCATCGAAGTGGTGGACAACATCACCCCTGCAGAGATATCAGACCC
TCAGGAGATCATCGCCCGTGCCGAGGCGCTTTCTGTAGAACTCAGTACGCCAATAGAACCTGGTTTCGACGCGCTGGTGT
TTAAAGCCACACGCGGTATTGAAGACATTTATGAATTAACTTATATCCGTAAAGACGGTAGTCGCTTTCCTGCTGTTGTG
TCGGTTACCGCACTACGCGACGATCAAGGTATTATCATAGGTTATCTTTTGATCGGCACAGATAACAGTGTTGGCAAGCA
GGCGGAAGAAGCTTTGCTCAAAGCAGGTGCACTGCAGAAAGCCATTTTCAACAGTGCTAACTTTTCCAGTATTGCTACCG
ACGCTCATGGCGTTATCCAGATATTTAATGTGGGTGCCGAGCGAATGCTGGGTTATACAGCTGACGAGGTGATGAACAAG
ATCACACCCGCAGATATCTCCGACCCCAAAGAAGTCATCGAGCGAGCTAAAGAGCTCAGTATTGAACTGGATACTGCAAT
CACACCTGGTTTTGATGCGTTAGTATTTAAGGCCCGGCGCGGCATTGAGGATATCTACGAGCTAACTTACATACGCAAAG
ATGGCAGCCGCTTCCCGGCAGTAGTGTCAGTCACTGCTTTGCGTGATGAGCACAAGGCTATCATTGGTTATTTGTTAATC
GGTACCGATAACACCGCGCGTAAACGTATCGAGGAGGAGCAAAAAGAACTCGGTCGACGTTTGCAAGATCAACATTTCTA
TACCCGTAATCTGATTGAATCCAACATTGATGCTCTGACGACCACAGATCCTTCCGGTATCATTACCGATGTGAATAAAC
AAATGGAAGAACTTACAGGTAACAACCGTGACTCCCTTATAGGCACTCCATTCAAAGACTACTTCACCGATCCTGAGTTT
GCTGCGGCTGGCATAAAAAGGGTGTTAAGTGAGAAGATAATCTCTGATTATGAATTGACCGCCCGCACCAAGAACGGTAA
AGAAACCGTGGTTTCCATTAATGCGACCACCTTTTATCACCGAGACAATAAACTGCAAGGTATTTTTTATGGCGCTCGCG
ATGTAACTGAACGTAATCGCCTAAATCAAAAACTGCTGGAAAAGAACATCGAACTGGAAAATGCTAAAGCGGTGGCTGAG
AAAGCCAATCTCGCCAAATCGGATTTTCTTTCCAGTATGAGCCATGAGCTACGCACACCACTGGGTGCGATTCTAGGTTT
TGCACAGCTCATGGAATCGAGTACACCTGCGCCGCCTCCTGCTCAAAAACGCAGCATTGCTCAGATCCTCAAAGCAGGAT
GGTACTTGTTGGAGCTTATCAATGAAATACTTGACCTAGCACTAATCGAATCCGGCAAGCTACCCATGTCACTGGAAGCT
GTTTCGCTGTCCGAAGTCATGCAAGAATGTGTGTTGATGAGTGAGCCGCAAGCTCAACTCCATGACATCAAAGTCGTCTT
TACCCGATCTACGACTAAAGATTTTCTTAATGTCGATAGAACCCGACTAAAACAGGTAATTATTAATCTGCTTTCCAATG
CAATTAAATATAACCGGAAGGGCGGAAGCGTGATACTGGAACACAGCCAAAGCAGTGACGATATGATGCGGTTCAGTGTT
CGAGATACAGGTGAAGGATTATCAGCTGAGCAACTTGGGCAACTTTTCCAGCCCTTTAATCGCCTCGGTCAAGAAGCCAA
TAATCAAGAAGGTACAGGAATCGGTCTAGTGGTTAGTAAGCGTTTGGTTGAATCTATGGGGGGAGTCATTGGCGTGCAAA
GTACCGTTGGCGTGGGTAGTGTCTTCTGGTTTGAACTAAAGCGAACTGACGAACCCGTATCTAACCTTGCTGACAGCGCA
ATAATGGTCACGGAAACGCTACAATATGAAGATTCTGAGCGTTTGCAAACCTTACTATATGTCGAAGATAATCCGGCTAA
TTTGATGCTTGTTGAGAATATTATTTCTCGTCGGCCTAATTTGCGTTTTCTCAGTGCTGCGGATGCTATTCAAGGTATTG
AAATGGCACATACGCATCAGCCGGATGTTATTTTGATGGACATTAATCTACCGGGAATTAGCGGCTTGATCGCATTGAAA
ATTCTCAGGGAAAGTCCGATAACAGCATCGATACCTGTGGTAGCTCTCAGTGCAAATGCCATTCCCCGGGACATTGAAAA
AGGTTTGGATGCTGGCTTCTTTCATTATCTTACTAAACCACTGCGGATCAATGAGTTTCTGAAGACTCTGGATATAGCGC
TTGAGTATGCCAATAAGTCTGCTGTAATCGCTGATGATGAGGAAAAATAA

Upstream 100 bases:

>100_bases
ATCTTTATCGTCAGATAAATACACCGATATGGCAGGTTTTTTCTCTGGGTCGCCATTTCGGTTCCAGTCAAAAACCAACG
TATGGTCATAGAGGTTAATC

Downstream 100 bases:

>100_bases
TGGAAATCACTGCAAACGATATTCTTAACGCTAAGATTTTGATTGTCGATGATCAAGAGCCTAATGTGCTTCTGTTGGAG
CAATTGCTACTTGAAAGCGG

Product: PAS/PAC sensor hybrid histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>869_residues
MKGENKRSPSSLVKSDVIETLLGLNSEDDVDLFEAAIEEVTERRHAEEALLNAGALQRAIFNSANFSCIATDAKGVIQIF
NVGAERMLGYSAIEVVDNITPAEISDPQEIIARAEALSVELSTPIEPGFDALVFKATRGIEDIYELTYIRKDGSRFPAVV
SVTALRDDQGIIIGYLLIGTDNSVGKQAEEALLKAGALQKAIFNSANFSSIATDAHGVIQIFNVGAERMLGYTADEVMNK
ITPADISDPKEVIERAKELSIELDTAITPGFDALVFKARRGIEDIYELTYIRKDGSRFPAVVSVTALRDEHKAIIGYLLI
GTDNTARKRIEEEQKELGRRLQDQHFYTRNLIESNIDALTTTDPSGIITDVNKQMEELTGNNRDSLIGTPFKDYFTDPEF
AAAGIKRVLSEKIISDYELTARTKNGKETVVSINATTFYHRDNKLQGIFYGARDVTERNRLNQKLLEKNIELENAKAVAE
KANLAKSDFLSSMSHELRTPLGAILGFAQLMESSTPAPPPAQKRSIAQILKAGWYLLELINEILDLALIESGKLPMSLEA
VSLSEVMQECVLMSEPQAQLHDIKVVFTRSTTKDFLNVDRTRLKQVIINLLSNAIKYNRKGGSVILEHSQSSDDMMRFSV
RDTGEGLSAEQLGQLFQPFNRLGQEANNQEGTGIGLVVSKRLVESMGGVIGVQSTVGVGSVFWFELKRTDEPVSNLADSA
IMVTETLQYEDSERLQTLLYVEDNPANLMLVENIISRRPNLRFLSAADAIQGIEMAHTHQPDVILMDINLPGISGLIALK
ILRESPITASIPVVALSANAIPRDIEKGLDAGFFHYLTKPLRINEFLKTLDIALEYANKSAVIADDEEK

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA