Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is Not Available

Identifier: 114562196

GI number:

Start: 1191486

End: 1194164

Strand: Reverse

Name: Not Available

Synonym: Sfri_1018

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562199

Following gene: 114562195

Centisome position: NA

GC content: NA

Gene sequence:

>2679_bases
ATGAATCATTCCATAAAAAAGACTTATCTCGTATTCACTATGCTATTAGGGTTTATCCTTTTAGCTGGGTGTAATGGAGA
CAATAATAACGACAATAGTAATAACGACAATAACGGTGTGCTACTCACATCAATTGCGGTTACTCCTGCCACCCCTAGTA
TGCCACTAGGCTTAAAGCAACAGTTCACAGCTATGGGCACCTATTCGGATGGCACATCATCTGATATCACCAACTCAGCA
ACTTGGTCATCTGATGACTCTACAGTTGCCACTATCAATGGCAGCGGTCTAGCCATGGGAGTTATCCCTGGTTCAGTTGC
TATCACAGCATCCCTTATAGACTCATCATCAAACGAGCAATCCGCAACGACCACGCTAACTATCACTGATGCGACCTTAA
CGGCTTTGGCTATCACACCAGTCAACCCTAGCCTAGCTAAGGGTCTGACCAAACAATTTATGGCCACAGGCACTTATTCG
GATGGCACTTCCCCAGATGTTACCACTTCAGTAACGTGGTCATCGGCTAATACGCTAGTTGCCACAGTGAATGCAAGTGG
TCTTGCTAGTGGAGTTGCCATTGGATCTTCGATTATTACCGCATCGTTAGGTTCTGATGAAACAACGACTGAACTCAATA
TCACAGATGCTATTTTGAGTTCAATAGCGTTAACGCCGGTTGAACCAAGCATTGCCAAAGGCATAACCCAGCAGTTTACT
GCTATCGGTACTTATTCCGATGGTATCTCTGTTGATATTACCGCTTCGTCAAACTGGTCATCTGCGGATACACTGGTTGC
CACAATGAATACCAGTGGGGCAGCTAAAGGAGTTAGCATAGGTTCATCTATTATTACGGCGGATTTTCAAGCTCAATCAG
CAACTTCATTGCTGACAGTGACTGATGCCAGCTTAACGTCAATCATGTTAACACCTGCCAACCCACATATTCCTAAAGGT
AATACCCTTCAGTTGACTGCTACTGGTATTTACTCGGATGGGATCTCTGTTGACATAACTAGCTCTGCAATCTGGTCATC
AGCTGATACCCTTATTGCGACAGTAAATGCCGATGGTGTAGTCAGTGGTATTACTTCAGGTTCAGCTATTATTACCGCAA
CATCAGCTGCGCTGTCGGCCACAACTACTGTAACAGTTACTGATACAACGTTGACTTCAATTGCGGTAACACCAGGAAAT
CAAACCATAGTTAAAGGTTCGAATAAACAGTTAACCGCTACAGGAACTTATTCAGATGGTTCGCTAGCTAATATTACTGC
CTCTGTAACTTGGTCATCAGCAGATACCTTAGTTGCCACAGTAAATAATTCTGGACTAGCTAGTGGTATCGAAACTGGCT
CATCGCTAATTAGTGCAAGCTCAGGTGCTTTATCCGGTAGTACCAATTTAACAATTACCGGCGCAGCTTTGAACTCAATT
GTGGTATCGCCAACCAATTTAAGCCTTGTTAAAGGTATGAACAAGCAGTTTGCTGCAACCGCTACTTATTCTGATGGATC
TGTAGCAGATATTTCGACCTCGGTTACCTGGTCATCTGCTGATACCTTGGTTGCTACAATTGATGTCAATGGTCTTGCGA
ATGGCAAGGCGGCTGGCTCATCACTTATTACCGCAACTTCAGGTGCACAATCAAACAGTACTAACTTAACCGTTACCGAT
GCCACCTTGAATTCGATTGATGTAACACCAATTAATCCAAGCATTATTAAAAACTCAAGCCAAAACTTTGTGGCTACTGG
GCATTATTCAGACGGTAGTACAACAAATATTACCTCGACAGTGATGTGGTCTTCAGCTGATACACTAGTTGCTACATTGA
ATCCCAATGAACAGCTAAATAGCGGGCGTGCCACAGCTATTGAAGTAGGCTCATCGGTGATTCAAGCATCACTAAGTGGA
GTATTTGCGGATACAACACTTAATGTTACTGCTGCCCTACCAAACAACCCACTAGCACCAGAATTGGGTGAAGTGGCGCG
TTTTGCCATGCTTGCCTCACAAGCCATTACTACCACGAGTGGTTCTGCCATTGTTGATGGTGATTTAGGTATTCTTGACC
AGGCACGTTCTTATTACGCAGGATTTACTCCTGGCGTTAATGCTGGCGAATTTGACGAATTAACCAATGGTTTGTCTTAT
GCTGGCGACGATAGTACTCCCCCCTATGTTGTTCCTGTGCCTTATGCATCTATGGTCGCATTTATTAACCAGTCCAGAAC
GGATCTTGGTATTGCATATAACTTCCTAGCTGCAGATCCTAACCCAAACGCAGCGACTCAGGTTTGTCCTATTGAATTGG
GGAATCTGACTCTGACTCGTGGTGTCTATAAAACTGCAGCTGATGTGACCCTCCAAACAGGCACTCTCACCCTTGATGGC
GAAGGAGATCCTGATTCGGTGTTTATTTTCACCATAGGCGGAAACCTGACATCTGGTGCTCCAGGTGGCGACATTGTGCT
CATTAATGGCGCACAAGCAAAGAATATCTATTGGAGAACAGCCGGAAAAACAGTTATCGGAACGAACACAAACTTCTCAG
GCAATGTTTTTGCTTGGTCAGAAGTGAATGTGCGGACTGGTGCTAACGTCACAGGCCGATTATTTGCCGTTACCGATCAG
GTCACTCTGGATGCTAACGCAGTAACCAAAGCTAACTAG

Upstream 100 bases:

>100_bases
ACAGAATTATCAACACTCATCGCTATAAAACATGAGCCGTTTGTACAGGAGTAGGAAAGAGAAATAAATGTAATTTCACA
GAGTTATGAGGAAGAATAGA

Downstream 100 bases:

>100_bases
TTTTAAGCTCGGCTTACCCAAGTTGACAAAAATAGATAGAAAGAATGAGGGAACAGATAGTCTGTCTCCTCATTAACCAC
TACTGTGCAATGAGGCCCAT

Product: Ig domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>892_residues
MNHSIKKTYLVFTMLLGFILLAGCNGDNNNDNSNNDNNGVLLTSIAVTPATPSMPLGLKQQFTAMGTYSDGTSSDITNSA
TWSSDDSTVATINGSGLAMGVIPGSVAITASLIDSSSNEQSATTTLTITDATLTALAITPVNPSLAKGLTKQFMATGTYS
DGTSPDVTTSVTWSSANTLVATVNASGLASGVAIGSSIITASLGSDETTTELNITDAILSSIALTPVEPSIAKGITQQFT
AIGTYSDGISVDITASSNWSSADTLVATMNTSGAAKGVSIGSSIITADFQAQSATSLLTVTDASLTSIMLTPANPHIPKG
NTLQLTATGIYSDGISVDITSSAIWSSADTLIATVNADGVVSGITSGSAIITATSAALSATTTVTVTDTTLTSIAVTPGN
QTIVKGSNKQLTATGTYSDGSLANITASVTWSSADTLVATVNNSGLASGIETGSSLISASSGALSGSTNLTITGAALNSI
VVSPTNLSLVKGMNKQFAATATYSDGSVADISTSVTWSSADTLVATIDVNGLANGKAAGSSLITATSGAQSNSTNLTVTD
ATLNSIDVTPINPSIIKNSSQNFVATGHYSDGSTTNITSTVMWSSADTLVATLNPNEQLNSGRATAIEVGSSVIQASLSG
VFADTTLNVTAALPNNPLAPELGEVARFAMLASQAITTTSGSAIVDGDLGILDQARSYYAGFTPGVNAGEFDELTNGLSY
AGDDSTPPYVVPVPYASMVAFINQSRTDLGIAYNFLAADPNPNAATQVCPIELGNLTLTRGVYKTAADVTLQTGTLTLDG
EGDPDSVFIFTIGGNLTSGAPGGDIVLINGAQAKNIYWRTAGKTVIGTNTNFSGNVFAWSEVNVRTGANVTGRLFAVTDQ
VTLDANAVTKAN

Sequences:
NA

Specific function: NA

COG id: COG5492

COG function: function code N; Bacterial surface proteins containing Ig-like domains

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA