Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562187

GI number:

Start: 1180179

End: 1182563

Strand: Reverse

Name: Not Available

Synonym: Sfri_1009

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562189

Following gene: 114562184

Centisome position: NA

GC content: NA

Gene sequence:

>2385_bases
ATGAGTTTAGATAACCACAGGGCATTAATAGAACAACTGAAACCGTTGATCATGGAACCTGATTTTCAGGACGTATTTGA
ACAGTTAACAGTTGATGAATCGAATTCAACCCGTTTTCTATTGAAAATGGAGCTAAATCGCATCTCATCTTTGTGCACGC
GAATTATCGATTTACGAGATAAAACAGAACTGCCATGTGAAGAAGTTGTCGTCGCCAATCAAAGATATTTCCTAGACGAG
CCCGCTAAAGAAGCCTTGCTACAAGCGCTACCATTATACCGTAACAAATATACCTTAGGTGTGTACGAGCACGTTATAAA
AGCGCATAAACTTCGACGTCTTAAACTCAGAGAGAATGTTTCAGTTGAGGTCATTGACGAAGAAAATCCCTTTTTGGTGC
CTGGTGTTGTGCTTGGCAGTTATTTTAATCGCTGTGAAGAACGAATGAATTATAGCATTCGAATTATGGTTTCTCAGCAA
GGAATAACCGAAGTCAGTGGTGCAACGCTAGATTTATCTGTCGGCGGAGCTCGCATTAAGCTGCCGTTAAAGCATCATTT
AGACCAAGACAAACCTTTACTGGTAAAACTACTCGAACTCAGTGATGAATTTTATCTCGATGATCTAAAACATGGTGTTG
AATATCAAATAGTGGATATTCAAAACAAAGATGATAGTGCTGTTTTTAGATTGAAAAGACTGGGTGGCGGAGAAGCATTA
GACAGCTTGTTATCACAGCTTATCCGCGGCTATAAGTTTCGTTATAAAGTAGATGTCAACGACGTCATTGTTACCGCTAC
CGGGTTAGGTTATGAGCGACATTACTTACCTCTGTTAACACATTTACCTCTGTTCGTTTCCATCATTGAAGGTAAACCAC
TCATAAACTACGAATTATTGGGTAGAGGTAACAAACCAATCCAACATTATTTTCAAGATGAAAATGAAATTAGTCAGTTA
CCGAGTTTTATTAATACCAGACGTTTAACCCAAATGCTCAAAAACATTGATAATAGTGAGCATTGTTATTTATTCAGTTT
TATTCATAACTCTAACGGTAAATTACATTTTTATTCTGCAACTTTAGCGGAGCTAAAAGCGACCAAAAATATTCATCTTT
TTTTGGGTTTTGCGTCTACCAAAACAAGTTGGCGCGTATTTAAAATTGTAATGCAACCTATTGATCATAGCAAAAACTAC
AAAACGTCCACTTTACCGGGGGATGATGCACGTTATGCTGCCCTCACTGAGCAACAATTAGCTCAATTTAGTCATACTTT
ACAACTTATTGATTTAACCAACGAGGAAGCTCGTAAAGACTATCAATGCTGGTTTGATCAATCTGATGTGAATGGCTTAA
AGATATTCTCCCAAGCAAAAATAAAACAACACAGCATCAAAAAAGTATCAATGCCATTTAGTGAGCGGCGCCATGAGGCT
CGATTCATTTTTAAAACCTTAATCACAATTCAACAAGGTGACAAACAGGCCACTGGTATTACCCATGATATTTCGAGTCG
AGGTTTACAACTGACGTTAGAGAAATCGGCTAACTTCAACGAACCTGGAGCAGTCACATTATCATTTCCACGCCTGCAAG
CCGCTGCGGGTAAAACTAATTTATCAAATTTACCTTATCAGTTAATTCGCAGCAGGATGAATGGTGTGACTTTACATTTG
AGCGCCATCATAGGTCACTCCCCGCATGAAGGTGTAGAGTTTTTAAGTAAATTGATTGCTCACAATAAACAAAAACTCGA
GCAGTTATCAGATAATGAAGGCCAGAAAAAAGAACTGGCTGATGGCATGAAAAACCTTGTAATGCGCCAATTACCAGGAG
TGCCATATTTTATTGAAAAAACAGTAAAAGCGGCTCAAATGGCTTACATAGGTATTGGCACAACCACAGATGAAATAAGC
CATTTATTTGCTCAAGACAGCGATAAAGTACTGCAATACAATTTAAAACCACTATTGGACAACAATGTATTAAAACAACA
CATCATAGATCCTATCAAGTTAATGAAACCGACTCATGGTATGGCCTTTTTTGAAGTGTTTATGCAACTCACCCGTCACC
CTAGAGGTGCAGTACAGATCCAATGTAAACTTAAATCTGAACTGGGTAATAGAGAACAACAAATTCAATTTATTACTCAA
AGTAAAAAAGTGGGTCGCTTCATGGCGTTAAGGGTGTATATAGGAGCAACTGACAAGCCCGATATGAGCTATATTCGACG
CGAGCTAGAATATATCCACATACATGCTAATCACCGTGCAAAGCAATTAGAAGAGCAATTGTGGAGAGTTATCGGTTCAG
GTGAGCTATTAGATATTACTACTGAAGTTGAAATCCGTTTTCCAAGCTTAATGACACTAGCCTAA

Upstream 100 bases:

>100_bases
ATCGAACAACATTGAAATGTATATTACTATAAAGATCAGCGCTTTCTTGCCGATAAAATTATCAGCCAGACTCACAATAA
GCATTTAAAACGATAAAATA

Downstream 100 bases:

>100_bases
GTAATCTTTCAGTAACCGCTAATCATAATTAAAAATAGCATAAATCGATGATCTGAATTTATTTCAAAACTGCATTTTTA
CTAACCAAAGATTGACTAGC

Product: type IV pilus assembly PilZ

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>794_residues
MSLDNHRALIEQLKPLIMEPDFQDVFEQLTVDESNSTRFLLKMELNRISSLCTRIIDLRDKTELPCEEVVVANQRYFLDE
PAKEALLQALPLYRNKYTLGVYEHVIKAHKLRRLKLRENVSVEVIDEENPFLVPGVVLGSYFNRCEERMNYSIRIMVSQQ
GITEVSGATLDLSVGGARIKLPLKHHLDQDKPLLVKLLELSDEFYLDDLKHGVEYQIVDIQNKDDSAVFRLKRLGGGEAL
DSLLSQLIRGYKFRYKVDVNDVIVTATGLGYERHYLPLLTHLPLFVSIIEGKPLINYELLGRGNKPIQHYFQDENEISQL
PSFINTRRLTQMLKNIDNSEHCYLFSFIHNSNGKLHFYSATLAELKATKNIHLFLGFASTKTSWRVFKIVMQPIDHSKNY
KTSTLPGDDARYAALTEQQLAQFSHTLQLIDLTNEEARKDYQCWFDQSDVNGLKIFSQAKIKQHSIKKVSMPFSERRHEA
RFIFKTLITIQQGDKQATGITHDISSRGLQLTLEKSANFNEPGAVTLSFPRLQAAAGKTNLSNLPYQLIRSRMNGVTLHL
SAIIGHSPHEGVEFLSKLIAHNKQKLEQLSDNEGQKKELADGMKNLVMRQLPGVPYFIEKTVKAAQMAYIGIGTTTDEIS
HLFAQDSDKVLQYNLKPLLDNNVLKQHIIDPIKLMKPTHGMAFFEVFMQLTRHPRGAVQIQCKLKSELGNREQQIQFITQ
SKKVGRFMALRVYIGATDKPDMSYIRRELEYIHIHANHRAKQLEEQLWRVIGSGELLDITTEVEIRFPSLMTLA

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA