Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114562182

GI number:

Start: 1175056

End: 1176273

Strand: Direct

Name: Not Available

Synonym: Sfri_1004

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562181

Following gene: 114562183

Centisome position: NA

GC content: NA

Gene sequence:

>1218_bases
ATGAAACGTACTTTTATCTTAATGCTCGACTCTTTTGGTGTTGGTGCTGCTACCGACGCCGATAAGTTTGGTGACGTTGG
CTCAGATACTTTTGGTCACATCGCGCAAGCCTGTGCTGACGGCAAAGCGGATATCGGCCGTCAAGGTCCATTGAAATTAC
CTAATCTTGCTCGCTTTGGTTTAGGCCATGCTGGTTTTGAAAGTACGGGTAAATTTGCTGCTGGATTTGCAGATAATGTC
GAAGTCATCGGTGCTTATGGTCATGCTGACGAATTAAGCTCAGGCAAAGACACTCCTAGTGGTCACTGGGAAATGGCGGG
TGTTCCTGTCCTTTATGAGTGGGGTTATTTTAGTGACTTAACCAATTCATTTCCTAAAGAACTCACAGATAAAATCCTTG
AACGCGCTGGTTTAGATGGGTTTTTAGGTAACTGCCATGCTTCAGGTACTCAAATTCTTGAAGAGTTAGGCGAAGAGCAC
ATGAAAACAGGCAAGCCTATTTTCTATACCTCTGCTGACTCTGTATTCCAAATAGCATGTCATGAAGAAAGTTTTGGTGT
AGAAAATTTATATAACTTGTGCAAAATTGCGCGTGAAGAGTTAGAGCCTTATAACATTGGTCGTGTAATTGCTCGACCAT
TTGTTGGTACTGGCCCTGCTGATTTCGCTCGTACTGGTAATCGTCATGACTATGCGGTATTACCACCAGCACCTACAGTA
TTAGATAAGCTTAAAGATGCTGGCGGTGAAGTGGTTAGTATCGGTAAAATTTCTGATATATATGCTCACAGTGGTATTAC
TCAACAATTTAAAGCGACAGGTCTCGAAGAGTTATTTGACGAAACCTTAGCGCAAATTAAACGTGCTGGTGATAACACGA
TTGTGTTTACTAATTTCGTTGATTTTGACTCTCATTATGGACATCGTCGTGACACCGCCGGCTATGCTAAAGCACTTGAG
TACTTTGATTCTCGTTTACCGGAATTATTAGCGATTTTACAACCTGAAGATTTAGTCATTTTCACTGCTGATCATGGTTG
TGATCCTACTTGGGTTGGCACTGAACATACTCGTGAACGTGTGCCGGTACTCGCCTATGGTGCAGGTTTATCTGCAGGCT
CACTAGGCCGTCGTAAGTCTTTTGCTGATATTGGTCAGTCTATTGCGAGTTATTTTAAGTTAGAACCGATGAATTATGGT
GAATCTTTTATTAATTAG

Upstream 100 bases:

>100_bases
TGCTATTCAGCAAGCCATTATTATTGGTGATAGCGCGCCTGAGAAAACGCCTGAAATATATCGTTATATTCGCGCTTCAG
ATTTATAAAGGAAACAAATA

Downstream 100 bases:

>100_bases
TCACATTTTCAAACGACGGTTCTATATAAAGTTTAATGGCTTTGCTAAACTGTAAACATGACTAAGCAATACAAATAAAA
TAGAAACATAGGGGTTATAA

Product: phosphopentomutase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>405_residues
MKRTFILMLDSFGVGAATDADKFGDVGSDTFGHIAQACADGKADIGRQGPLKLPNLARFGLGHAGFESTGKFAAGFADNV
EVIGAYGHADELSSGKDTPSGHWEMAGVPVLYEWGYFSDLTNSFPKELTDKILERAGLDGFLGNCHASGTQILEELGEEH
MKTGKPIFYTSADSVFQIACHEESFGVENLYNLCKIAREELEPYNIGRVIARPFVGTGPADFARTGNRHDYAVLPPAPTV
LDKLKDAGGEVVSIGKISDIYAHSGITQQFKATGLEELFDETLAQIKRAGDNTIVFTNFVDFDSHYGHRRDTAGYAKALE
YFDSRLPELLAILQPEDLVIFTADHGCDPTWVGTEHTRERVPVLAYGAGLSAGSLGRRKSFADIGQSIASYFKLEPMNYG
ESFIN

Sequences:
NA

Specific function: NA

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA