Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114562027

GI number:

Start: 997363

End: 998175

Strand: Reverse

Name: Not Available

Synonym: Sfri_0849

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562028

Following gene: 114562026

Centisome position: NA

GC content: NA

Gene sequence:

>813_bases
ATGGAAGATTCACGTAAAGCATTACAAGCATTTTTAGATATTATTTCGTTTGATCGAATAATCAGTATTTTACTGCTGTG
TCTAATGGCGTGGCTGTTATTGGTATTGATCCAATTTTGCTTAAATCAACTGAATAAAGCGTTGCCTAAATACCGCTTAA
TTTGGAATCGGTCATACCCTTTTGTGCGTTTATTTGTATGGCTTAGTGTGATTGTTTATTCGATCGTTGGCATTATCGAC
CCGCATGAAAATCTCATTCTAGCCGTGGTCGGGTCTATCAGTATTGTGGTGGGGTTAGCGACACAGGAACCGGCTAAAAA
TATGATTGCAGGGTTTATTATCATGATTAACCCGCCATATCGCGTTGGCGACATGGTCACATTGTCAGGCCATTACGGCG
AAGTCATTAAGCTAGAATGGAGCGTTACCTGGTTGCGTACTTTTGATGACAATACTGTCATGATCCCCAATGCTGAAGCC
TTAAAAACGGCAGTGTCTAATGCCAACAGTGGCGCTTTAGATGAAATGGTTGTGGTAAAATTTACTTTGCCTATGCTTGT
TGACCACAAAAAAGCCATTGCCCTTGCCCGCGAAGCCACACAGTGCTCACCTTATACTTTTCTAAATAAGCCCATTATTG
TCAATTTAGGTAACGAATATGACTTAGGCGAGTTTTTACAAACCATTACCGTTAAGGCCTACGTAATGGATGTACGTCTA
GAGAAAAAGTTCATGAGCGACATTAATATCAGAGTATTGAGTGCGTTTAAAAAAGCACGTTTTTATGATGGACAGCAAAC
GCCGACACACTAA

Upstream 100 bases:

>100_bases
ATTTTGCCGAGCATTTCTACTTTATTACTCCAACATTAAGCAAAATTATCGCCAACCATTTGGTGAATAACAATAAGTTG
TTTAATTAAACGAGGCGACT

Downstream 100 bases:

>100_bases
TTTGCGCTATAATCGAGCCAATTAGAGAAGAAATAACAGATTTTTTAGCATTGGGAACACTATTATGACACAAGATGAAA
TGAAAAAAGCAGCAGGTTGG

Product: MscS mechanosensitive ion channel

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>270_residues
MEDSRKALQAFLDIISFDRIISILLLCLMAWLLLVLIQFCLNQLNKALPKYRLIWNRSYPFVRLFVWLSVIVYSIVGIID
PHENLILAVVGSISIVVGLATQEPAKNMIAGFIIMINPPYRVGDMVTLSGHYGEVIKLEWSVTWLRTFDDNTVMIPNAEA
LKTAVSNANSGALDEMVVVKFTLPMLVDHKKAIALAREATQCSPYTFLNKPIIVNLGNEYDLGEFLQTITVKAYVMDVRL
EKKFMSDINIRVLSAFKKARFYDGQQTPTH

Sequences:
NA

Specific function: NA

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA