Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114561929

GI number:

Start: 876116

End: 878461

Strand: Reverse

Name: Not Available

Synonym: Sfri_0747

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561930

Following gene: 114561925

Centisome position: NA

GC content: NA

Gene sequence:

>2346_bases
ATGTCTAGTCATCACCAAAAACCAACCAAAGCCGGCGGATTCCCTTCACTGCAAGCCACATTTACTCATGTACTTCGCAG
CCAACACACTAAGCAAAACCTTAAAAACTTACTCCGTGTTAATCAAACTGATGGCTTCGATTGTCCGGGTTGTGCATGGG
GCGATAACAAACAAGGTGCATTTCAGTTTTGCGAAAATGGTGCTAAAGCCGTGGCATGGGAATCAACAGGCAAAGGCGTT
GGTCGCGATTTTTTTGCTCAGCATTCGGTACGCCAACTAACAAAACAGACTGACTACTGGTTAGAGTATCAGGGGCGTTT
AACCGAACCAATGCGCTTTAATGCGATAACAGATCACTATGAACCAGTAAGCTGGTCTGAGGCGTTTTCGATTATCGCCA
CCAAGCTCAACAGTTTAAGTAGCCCTGACCAAGTTGAATTTTACACTTCTGGACGCGCCAGTAACGAAGCATCCTACCTC
TACCAACTGTTTGGCCGGCTTTATGGCACCAATAACTTTCCCGATTGCTCTAACATGTGCCACGAAGCTAGTGGTGTCGC
ATTAATTAGCGCCATTGGAATAGGTAAAGGCACGGTAGTATTAGAAGATTTTGATGCCGCCGAAGCCATTTTTGTGTTTG
GCCAAAACCCTGGCACCAACCACCCAAGAATGATGAATACTCTGCGCAAGGCCGCCAAACAAGGGGGTAAAATTGTCACT
TTCAATAATCTTAAAGAAGTTGCCTTAGAAAAGTTCGCCAGTCCACAAAGTCCTATAGAATTGCTCACACCAGCAGCCAC
TACCATCAGCCATTTGTATTTAACCCCTAAATTAGGCGGCGATATGGCCGCTGCGCGAGGCATGGCTAAATTTATTATTG
AACAACGTCCAGATAAAATAGACCATGAGTTTATACAACAGCACAGTGCATTTTTTGAAGATTATCAACACAGTGTTACA
CACACTAGCTGGGATAAAATAGAACAACAATCTGGACTGACAAAAGCAGAGATTATTCAAGCTGCGACCGTGTTCAGTGA
CAGTAAAACCGTGATCAGTTGCTGGGCAATGGGCTTAACTCAACATAAGCATTCGGTCGACATTATTCGTGAAGTCGTTA
ACCTGCATCTGCTATGTGGTCAAATAGGCAAAAAAGGCGCCGGATTATGCCCTGTTCGCGGCCACAGTAATGTGCAAGGC
AACCGCACTATGGGCATTAATGAAAAGCCGTCTGCCGCTTTTATTACCCGCTTAGAACAGCATTTGTCTACCAGCTTACC
GCGGCAAGCGGGCCACAATGTGGTCGAAGCCCTTAAAGCCCTACACAGTAAACAGAGTAAGGTGCTAATTTGTTTAGGTG
GAAATCTTGCGGCTGCGGCGCCCGATACTGATTTTACATACCAAGCGATGCGCAATGCTGAACTGAATGTTCAAATCAGC
ACTAAGCTTAATCGCAGCCACTTACAAGTAACACACGACGCCTTAATTTTACCTTGTTTAGGCCGTACCGAATTAGACAA
GCAGCAAAGCGGCATTCAAAAAATCACCGTTGAAGATACCTTTAGCATGGTTCATGCTTCAACAGGTATGACCGAACCCG
CCTCAGAACAATGTTTATCTGAAATTGATATTGTCGCTCAAATGGCTCATGCAACATTTAACCATTCCGGCTCGACTCAG
CTCAACTCAACAAACCATGCCGCAAATAAACTAGATTGGCTGGCATTACGTGATGACTATGCACTAATTCGTCAGCTTAT
CGAAAATACCATCGACGGCTTTAATGACTTTAATCAACGTATCGAGCAACCTGCCGGGTTTTATCTGGGGAATAGTGCTG
CTGAGCTTATTTGGAATACCACTAACCAGTTAGCTCAATTTAATCCTAGTCAGTTGCCAAATTCAGTTATTGCAGATTGC
TCAAGCAACGCACAAACAACTGCGTCATCCGCCGAACAACAAGCTATTTTTTTACTGCAAAGTTTGCGATCTCACGACCA
ATACAACACCACTATTTATGGCATGGACGACCGGTATCGCGGTATTAAAGGCAAGCGGAATGTATTGTTTATGAACCAAC
AAGATGCTGTTCAACTTAATCTTCTTGAAGACCAGCTTGTTGATATACAGTCTATTGCCAACGATAATATCGTCCGCAAA
GTCTGTGGCTTTAGCGTGGTTTATTACGATATTCCACGCGGTAACATTGCCGCATATTACCCCGAGACGAATCCACTGGT
GTCAATCAACAGCGTCGGAATTGGCTCTTACACCCCAACCTCAAAATCAATCCCAGTGGTTATTACTGCATCAACCAAAC
AGGTGATTAGCGTGGCTCAGGTATAA

Upstream 100 bases:

>100_bases
ATTATTCACATACCCAAGTTTTCAGCGCCTATTTATTATTCCAGTTACGACTCTCACTTCAATGTTAATCGTCTATCGCT
GAGCCCTATCGGAGAAATTC

Downstream 100 bases:

>100_bases
GTAACCTAAACTCGGAATAACAATACTCAAACGATGTTGCCCTAGCGCATTAGCGCTGGGCGACTAAATCAGCCAAAACT
TGTTTATACGCTTCAACTGG

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>781_residues
MSSHHQKPTKAGGFPSLQATFTHVLRSQHTKQNLKNLLRVNQTDGFDCPGCAWGDNKQGAFQFCENGAKAVAWESTGKGV
GRDFFAQHSVRQLTKQTDYWLEYQGRLTEPMRFNAITDHYEPVSWSEAFSIIATKLNSLSSPDQVEFYTSGRASNEASYL
YQLFGRLYGTNNFPDCSNMCHEASGVALISAIGIGKGTVVLEDFDAAEAIFVFGQNPGTNHPRMMNTLRKAAKQGGKIVT
FNNLKEVALEKFASPQSPIELLTPAATTISHLYLTPKLGGDMAAARGMAKFIIEQRPDKIDHEFIQQHSAFFEDYQHSVT
HTSWDKIEQQSGLTKAEIIQAATVFSDSKTVISCWAMGLTQHKHSVDIIREVVNLHLLCGQIGKKGAGLCPVRGHSNVQG
NRTMGINEKPSAAFITRLEQHLSTSLPRQAGHNVVEALKALHSKQSKVLICLGGNLAAAAPDTDFTYQAMRNAELNVQIS
TKLNRSHLQVTHDALILPCLGRTELDKQQSGIQKITVEDTFSMVHASTGMTEPASEQCLSEIDIVAQMAHATFNHSGSTQ
LNSTNHAANKLDWLALRDDYALIRQLIENTIDGFNDFNQRIEQPAGFYLGNSAAELIWNTTNQLAQFNPSQLPNSVIADC
SSNAQTTASSAEQQAIFLLQSLRSHDQYNTTIYGMDDRYRGIKGKRNVLFMNQQDAVQLNLLEDQLVDIQSIANDNIVRK
VCGFSVVYYDIPRGNIAAYYPETNPLVSINSVGIGSYTPTSKSIPVVITASTKQVISVAQV

Sequences:
NA

Specific function: NA

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA