Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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Identifier: 114561854

GI number:

Start: 780641

End: 783238

Strand: Direct

Name: Not Available

Synonym: Sfri_0669

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561853

Following gene: 114561856

Centisome position: NA

GC content: NA

Gene sequence:

>2598_bases
ATGTATCAGATCCTAGGAGGTTGTATGAGACTCGATCGTATGACTAATAAGTTTCAAATTGCCATTTCTGATGCCCAATC
ATTAGCATTGGGACGCGATCATCAATTTATTGAACCTATTCATTTAATGATGGCGCTGTTAAATCAAGATTCTGGTTCTA
TCCATTCTTTACTTACGCAAGCGGGCATTCGTGTTAGCGCGCTTCGCTCTGCGGTTAGCCAAGAGTTGGAGCGTTTTCCA
CAAGTTGAAGGTACTGGTGGTGATGTTCAGTTATCACAAGGGTTAATTCGTTTACTAAACCTATGCGATAAGTTAGCGCA
AAAGCGCAAAGACAAATACATTTCATCTGAATTGTTTGTCTTGGCTGCATTGGAAAATAATGACCCCCTTGCCAAAGCAT
TAAAAGATTCTGGTGCAAGCAAAGAGTTAATGGAAAAAACCATTGAAGACATGCGTGGCGGGCAGAAAGTTGATGATCCC
AATGCTGAAGATCAACGCCAAGCATTGAAAAAATTTACCGTAGATTTAACCGAGCGCGCAGAGCAAGGTAAGTTAGACCC
TGTTATTGGTCGTGATGAGGAAATTCGTCGCACGATTCAAGTGCTACAACGCCGTACTAAAAATAATCCGGTATTAATTG
GTGAACCTGGTGTCGGTAAAACCGCCATTGTTGAAGGTTTAGCTCAGCGTATTGTTAATGGTGAAGTCCCTGAAGGGATT
AAAAATAAACGGGTATTGTCATTAGACATGGGGTCGTTAATTGCGGGAGCCAAATATCGCGGTGAGTTCGAAGAACGCTT
AAAAGCAGTATTAAATGAGCTATCACAAGAAGAAGGTCAGGTCATTCTGTTTATTGATGAGCTGCATACCATGGTCGGCG
CAGGTAAGGGCGAGGGCGCAATGGATGCTGGTAATATGCTTAAGCCTGCTTTAGCACGTGGTGATTTGCATTGTGTCGGC
GCAACAACACTTGATGAATATCGTCAATATATTGAGAAAGATGCTGCACTTGAACGCCGTTTTCAAAAAGTAATTGTTGA
TGAACCGAGCGTTGAAGACACCATTGCCATTTTACGTGGTTTAAAAGAGCGTTACGAATTACATCATCATGTTGAAATAA
CTGATCCTGCTATTGTTGCAGCTGCAACCATGTCGCATCGTTATATTTCAGACCGTAAACTGCCTGACAAAGCTATCGAC
TTAATTGATGAAGCCGCATCGAGTATCAGGATGCAGATTGATTCTAAGCCCGAAGTACTTGATCGATTAGAGCGCCGTGC
TATTCAGCTTAAGCTGGAAGAACAAGCGTTAAGTAAAGAGTCAGACGAAGCCAGTCGTAAACGTCTTGAGTTTTTACAAC
ATGAACTGAGAGATGTTGAAAGTAAAGCGGCTGAAATGAATGAGATTTGGCATACCGAGAAAGCAGCATTAGCAGGTACT
CAACATATTAAAGCTGATCTCGAACAGGCGAGAATGGATTTAGAAGTTGCTCGACGTGCTGGTGACTTAACGCGGATGTC
TGAATTACAGTATGGGCGTATTCCTGAACTTGAAAAACAGTTGGATTTAGCATCACAAGCCGAAATGCAAGATATGACAC
TGTTACGTAATAAAGTGACTGATGTCGAGATTGCAGAAGTACTATCGAAAGCGACGGGGATACCTGTTTCAAAAATGCTC
GAAGGCGAACGTGAAAAACTATTGCATATGGAAACCGCATTACATGAACGTGTAATTGGCCAAAACGAGGCTGTGGATGC
AGTATCTAATGCCATTCGCCGTAGCCGCGCCGGTCTTGCCGATCCGCAACGTCCAATCGGTTCGTTCTTGTTCCTCGGGC
CTACTGGTGTGGGTAAAACTGAATTATGTAAATCGCTAGCTAAGTTTTTATTTGATTCAGAATCGGCTCTTGTGCGCATT
GATATGTCTGAATTTATGGAAAAACATACCGTTTCGCGTTTAGTTGGTGCCCCTCCAGGATATGTGGGTTATGAAGAAGG
TGGTTATTTAACTGAAGCGGTTCGCCGTAAGCCTTACTCAGTGATTTTGTTAGACGAAGTTGAGAAGGCACATCCAGATG
TATTTAACGTGTTGTTGCAAGTATTAGATGATGGCCGTTTAACAGATGGCCAAGGCAGAACGGTTGATTTTAAAAACACT
GTGATCATCATGACCTCTAACCTTGGTTCAGATATTATCCAAGAGGGCTTTGGTCATACGAGTTATGAAGAGATGAAAGC
TGGAGTCATGAATGTTGTGACGCAAAGCTTCCGTCCAGAGTTTTTGAATCGAATTGATGAGTCTGTGGTATTCCATCCCT
TAGATGCAGAAAATATCAAACACATTGCCAGCATTCAATTTGAATTGTTGCGCAAGCGTCTTATTGAGAAAGAGTTTGAT
ATTGAGTTGTCTGATGCCGCTTTATCATTAATTGCCGAAGCTGGATTCGATCCTGTTTATGGTGCAAGGCCTTTAAAACG
AGCATTGCAACAAGAAGTGGAGAATCCTTTAGCCCAAAAATTACTTCGAGGCCAATTATTGCCAGGTAAAATGATTAAAG
TTGTAGTAGAAGATGGCAAGCTAGCTTTCAATCAATAA

Upstream 100 bases:

>100_bases
ATTTTTTGATCCAGATTAAGTTTTAACCTTGAGTTTACATTAAATGCCCCCATCTTTAAGTTAACAAATTATTCATTTCT
GAATTAATTTCCCATTCCAC

Downstream 100 bases:

>100_bases
TGTTATACCGCATTATTAGCTGAAGTTATTTGAACAAAGGGAGCATTAGCTCCCTTTTTTATTACTTGCTTTGACAAAAT
AACCTGACTCGCTCGGTGTT

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>865_residues
MYQILGGCMRLDRMTNKFQIAISDAQSLALGRDHQFIEPIHLMMALLNQDSGSIHSLLTQAGIRVSALRSAVSQELERFP
QVEGTGGDVQLSQGLIRLLNLCDKLAQKRKDKYISSELFVLAALENNDPLAKALKDSGASKELMEKTIEDMRGGQKVDDP
NAEDQRQALKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGI
KNKRVLSLDMGSLIAGAKYRGEFEERLKAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVG
ATTLDEYRQYIEKDAALERRFQKVIVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHRYISDRKLPDKAID
LIDEAASSIRMQIDSKPEVLDRLERRAIQLKLEEQALSKESDEASRKRLEFLQHELRDVESKAAEMNEIWHTEKAALAGT
QHIKADLEQARMDLEVARRAGDLTRMSELQYGRIPELEKQLDLASQAEMQDMTLLRNKVTDVEIAEVLSKATGIPVSKML
EGEREKLLHMETALHERVIGQNEAVDAVSNAIRRSRAGLADPQRPIGSFLFLGPTGVGKTELCKSLAKFLFDSESALVRI
DMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNT
VIIMTSNLGSDIIQEGFGHTSYEEMKAGVMNVVTQSFRPEFLNRIDESVVFHPLDAENIKHIASIQFELLRKRLIEKEFD
IELSDAALSLIAEAGFDPVYGARPLKRALQQEVENPLAQKLLRGQLLPGKMIKVVVEDGKLAFNQ

Sequences:
NA

Specific function: NA

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA