Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114561848

GI number:

Start: 773452

End: 774369

Strand: Direct

Name: Not Available

Synonym: Sfri_0663

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561847

Following gene: 114561849

Centisome position: NA

GC content: NA

Gene sequence:

>918_bases
TTGGATACCGCTTTGGCCAAACCTGTTTATCAACCCGATCCTTTAATTAACCAGTTTCTTGATGATTTATGGTCAACTAA
CGGGCTAAGTGATAATACCTTGGTATCTTATCGTACAGATTTACAAAATGCAGAACGTTACATTTTGACTAAAGGTAAGG
ATTTGCTGCAAGTTGACCAGGCCTTACTGCGTGACTATCTTGCTGAACGTTTTGATAAGCAATTTGCTAAAAGTAGTACA
GCGAGACTTCTCAGTAGTTTACGGCGTTTTTATGCTTACTTATTAGTTAAGCAGAAAATTAGCCAAGACCCGACTGCATT
AATCAAGTCACCTAAGCTCGTTCGCCAATTACCGGATACATTGTCTGAAGCGCAAATAGACAATTTGTTATCAGAGCCAA
ATATTGATGATCCGATCGAGCACCGAGATAAAGCCATGTTAGAGCTTTTGTATGCCACAGGGCTGCGGGTGACTGAATTG
GTAAGTTTAACGATGGAGCAGATTAGTTTGCGCCAAGGTTTAGTGAGGGTGATGGGTAAAGGAGGCAAAGAGCGTTTGGT
CCCTTTAGGTGAACTGGCCATTACAGCTGTTGAGCAGTACATCAAGTTTGCTCGTGCTGAACTATTAAGTATGAAACAGT
CTGATGTTTTGTTTCCCTCTCGCCGTGGGCAAATGATGACCAGACAAACCTTTTGGCATCGAATTAAATTGTATGCGGCC
AGAGCCGGTATTCAATGTCATCTATCTCCACATACGTTACGCCATGCTTTTGCTACCCATTTACTTAACCATGGCGCAGA
TTTACGTGTGGTACAATTGTTACTCGGTCACAGTGATTTATCGACCACTCAAATTTATACACATGTTGCTAAAGTACGCT
TACAGCAACTACATAGCCAACATCATCCACGCGGTTAG

Upstream 100 bases:

>100_bases
TGGATCAAAAAGCGGATGCTTAATTGTTAAATAGATCATAATTAACAGAGCAATATAACGACGTTATGATAGATTATCTA
ACGTCGTTTTTTATTATTTA

Downstream 100 bases:

>100_bases
CTTAGCGGGTTGTGTATCCGTGTGGGTTTCAAATTCTTACATTTAAGATAATGAGTATTTGTTGCGCTAGCGAAATTAAA
TCTGTAAGTTTTGCTTACGA

Product: tyrosine recombinase XerD

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>305_residues
MDTALAKPVYQPDPLINQFLDDLWSTNGLSDNTLVSYRTDLQNAERYILTKGKDLLQVDQALLRDYLAERFDKQFAKSST
ARLLSSLRRFYAYLLVKQKISQDPTALIKSPKLVRQLPDTLSEAQIDNLLSEPNIDDPIEHRDKAMLELLYATGLRVTEL
VSLTMEQISLRQGLVRVMGKGGKERLVPLGELAITAVEQYIKFARAELLSMKQSDVLFPSRRGQMMTRQTFWHRIKLYAA
RAGIQCHLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAKVRLQQLHSQHHPRG

Sequences:
NA

Specific function: NA

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA