Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 114561754

GI number:

Start: 658135

End: 661329

Strand: Direct

Name: Not Available

Synonym: Sfri_0568

Alternate gene names: NA

Gene position: NA

Preceding gene: 114561753

Following gene: 114561756

Centisome position: NA

GC content: NA

Gene sequence:

>3195_bases
ATGGAAGCGAATACTATGTTCAAAGCGAGTGAAGTACTGGACGGCCGCTACGACAATGCCACTCTTGAGGAACTGTTTAC
TGCAGTGACCAACAATTACATTGTCGATGAAGAGCAATACCTGTCTGAATTAATTAAGCTTGTGCCTTCGTCTGAACAAG
ACATTGAGCAAGTGACTCGTCGCGCCCATGAGCTCGTGAGCAAAGTTCGTCAGTTTGAGAAAAAAGGCCTGATGGTTGGT
ATTGATGCATTTTTGCAGCAATACAGCTTAGAAACAAAAGAAGGCATTATCTTAATGTGCTTGGCTGAAGCCTTGTTACG
TATTCCTGACGCGGCAACCGCGGATGCGCTTATCCAAGATAAACTGTCTGGTGCCAAGTGGGATGAACACCTTAATAAGA
GTGAGTCATTACTGGTTAACGCCTCAACATGGGGCTTAATGCTGACCGGTAAACTGGTTAAGTTAGATCGTAATACTGAC
GGTTCGCCAAGTCATATACTTAAACGTCTGGTTAATCGTGTTGGTGAGCCAATGATCCGCCAAGCCATGCTTGCAGCAAT
GAAGATCATGGGTAAGCAATTTGTGTTAGGTGAGGACGTTAAAGAAGCACTTAAAAATAGTGAAGCTAAACGTAAGTTAG
GTTATACCCATAGCTATGACATGTTAGGTGAAGCAGCATTAACCGCCAATGATGCGCAAAAGTATTTTAACGATTACAGC
AATGCTATTCGCGATTTAGGCGAACAGCAATACGATGAAGCGAACTCACCAAGACCCACCATATCAATCAAACTATCTGC
TTTGCACCCTCGTTATGAAGTCGCTAACGAGGATCGTGTATTAAGTGAATTATACGACACAGTTATTAAGCTGATAGTAC
AAGCGCGTGAACTTAACATTGGTATTTCTATTGATGCTGAAGAAGTTGACCGTCTTGAATTGTCATTGAAGTTATTTAAG
CAGCTTTATCAGTCAGAAGCCGCTAAAGGCTGGGGCTTATTAGGCATTGTGGTGCAAGCTTATTCTAAGCGTTGTTTACC
GGTGTTGTGTTGGTTGACGCGTCTTGCTAAAGATCAAGGCGATGAAATTCCGCTGCGTTTAGTTAAAGGTGCTTATTGGG
ACAGTGAGCTTAAATGGGCACAACAAGCGGGTGAGCGTGGTTACCCACTCTATACCCGTAAAGCAGGTACTGACGTGTCA
TATCTTGCTTGCGCACGTTATTTGCTGTCTGAAGCCACCCGTGGTGCGATTTACCCACAATTTGCCACCCATAACGCTCA
AACCGTTGCCAGCATTGATGCGATGGCAGGTAATCGTATATATGAGTTCCAACGTTTACACGGCATGGGGCAAGAGCTTT
ACGACACTATGCTTGCAGAAAGCGGTGCTAAAGCGGTACGTATCTATGCCCCCATTGGCGCCCATAAAGACTTACTGCCG
TATTTAGTACGCCGTTTACTTGAAAACGGTGCCAATACCTCATTTGTGCATAAACTGGTCGACCCTAATACGCCGATTGA
AAGCTTAGTCGTTCATCCATTGGTGACGCTATTAGGTTACAAGTCGTTAGCGAATCAAAAAATTGTTAAACCTGCTGATA
TTTTCGGTGCAGAACGTAAGAACTCTAAAGGATTAAACATGAACATTATTTCTGAGTCAGAGCCATTTTTTGCTGCACTG
GATAAATATAGCGATACTCAATGGACCGCGGGTCCATTGGTAAACGGTAAAACATTAACGGGTGAAGTACAAACTGTTGT
TAGCCCATATGATACTTCGCTAACCGTCGGTACCGTGGCTTTTGCAGATGCAAACGCAATTGAGCAAGCCATTGCTGGTG
CAGATGCTGCTTTTGGTAGTTGGGTTCGTACGCCTGTTGAAACTCGAGCGAATGCACTACAGAAATTAGCTGATTTATTG
GAAGAAAATCGTGAAGAGCTGATTGTATTATGTACCCGTGAAGCGGGTAAGAGCATTCAAGACGGCATTGATGAAGTTCG
TGAAGCAGTCGATTTTTGTCGTTACTACGCGGTACAAGCTAAGAAGATGATGGCTCAGCCTGAATTACTTCCTGGCCCGA
CAGGCGAGTTGAACGAACTGTTTTTACAAGGCCGCGGAATTTTTGTGTGTATTAGTCCATGGAACTTCCCGTTGGCGATT
TTCTTAGGCCAAGTATCTGCAGCACTTGCCGCGGGGAATACTGTTATTGCCAAGCCTGCGGAGCAAACCTGTTTAATCGG
TTATCGTGCAGTACAACTTGCGCATGAAGCCGGTATTCCTACCGATGTATTACAGTTTTTACCAGGTACTGGCGCTGTTG
TTGGTTCTGCAATCACTGCAGATGAACGTATTGGCGGTGTGTGTTTTACCGGCTCTACTGGCACCGCTAAATTGATTAAC
CGCACTTTGGCAAACCGTGATGGCGCAATTATTCCATTAATTGCTGAAACCGGTGGTCAAAATGCCATGGTTGTGGACTC
AACATCACAACCAGAGCAAGTTGTTAATGACGTAGTTTCTTCATCGTTCACCAGTGCTGGTCAGCGTTGTTCGGCATTGC
GAGTCTTATTTTTACAAGAAGATATTGCAGATCGCGTGATTGAAGTGATGAAAGGCGCCATGGAGCAATTAGTGATTGGC
AACCCAAGTTCAGTTAAAACTGACGTGGGACCAGTGATTGATGCCACTGCCAAAGCAAACTTGAATGCCCACATTGATCA
TATCAGCCAGGTCGGCAAGTTAATTAATAAACTTGAATTACCAGCGGGTACTGAAAACGGCCATTTTGTAGCGCCTACAG
CCGTTGAAATTAGTTCTATTAAGTTACTCGAAAAAGAACATTTTGGTCCTATTTTGCATGTTATTCGTTATAAAGCGGCT
GATTTGGCAAAAGTGGTTGATGAAATCAACAGCACAGGTTTTGGGTTAACCTTAGGTATTCACAGCCGTAATGAAGGCCA
TGCGCTGTCGCTTGCTGACAAAGTAAACGTAGGTAACGTGTACATTAACCGTAACCAAATTGGCGCCGTTGTTGGCGTGC
AACCATTTGGTGGTCAAGGTTTATCGGGCACCGGTCCTAAAGCGGGTGGCCCGCATTATTTAACTCGTTTTGTGACCGAA
AAAACGCGTACTAATAACATTACCGCGATTGGTGGTAATGCGACATTATTGTCACTGGGTGATGCTGAAGAATAA

Upstream 100 bases:

>100_bases
AATCGCCGAAAAACCAGATCGTACATTGTATACAAAATAAAATATTCGTGAATACAATGTCCATTCAACAACGATAATAA
CCATCCTTAACCTGACCCAG

Downstream 100 bases:

>100_bases
GCCTGAAGCACCTGCATTAAGCCCACTTGCTCGTGGGCTTTTTGTTATCTCTAGTTTAGGTTAGTTAATGATGGCCCTGG
ATATCATTGCGTTGTAAACC

Product: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1064_residues
MEANTMFKASEVLDGRYDNATLEELFTAVTNNYIVDEEQYLSELIKLVPSSEQDIEQVTRRAHELVSKVRQFEKKGLMVG
IDAFLQQYSLETKEGIILMCLAEALLRIPDAATADALIQDKLSGAKWDEHLNKSESLLVNASTWGLMLTGKLVKLDRNTD
GSPSHILKRLVNRVGEPMIRQAMLAAMKIMGKQFVLGEDVKEALKNSEAKRKLGYTHSYDMLGEAALTANDAQKYFNDYS
NAIRDLGEQQYDEANSPRPTISIKLSALHPRYEVANEDRVLSELYDTVIKLIVQARELNIGISIDAEEVDRLELSLKLFK
QLYQSEAAKGWGLLGIVVQAYSKRCLPVLCWLTRLAKDQGDEIPLRLVKGAYWDSELKWAQQAGERGYPLYTRKAGTDVS
YLACARYLLSEATRGAIYPQFATHNAQTVASIDAMAGNRIYEFQRLHGMGQELYDTMLAESGAKAVRIYAPIGAHKDLLP
YLVRRLLENGANTSFVHKLVDPNTPIESLVVHPLVTLLGYKSLANQKIVKPADIFGAERKNSKGLNMNIISESEPFFAAL
DKYSDTQWTAGPLVNGKTLTGEVQTVVSPYDTSLTVGTVAFADANAIEQAIAGADAAFGSWVRTPVETRANALQKLADLL
EENREELIVLCTREAGKSIQDGIDEVREAVDFCRYYAVQAKKMMAQPELLPGPTGELNELFLQGRGIFVCISPWNFPLAI
FLGQVSAALAAGNTVIAKPAEQTCLIGYRAVQLAHEAGIPTDVLQFLPGTGAVVGSAITADERIGGVCFTGSTGTAKLIN
RTLANRDGAIIPLIAETGGQNAMVVDSTSQPEQVVNDVVSSSFTSAGQRCSALRVLFLQEDIADRVIEVMKGAMEQLVIG
NPSSVKTDVGPVIDATAKANLNAHIDHISQVGKLINKLELPAGTENGHFVAPTAVEISSIKLLEKEHFGPILHVIRYKAA
DLAKVVDEINSTGFGLTLGIHSRNEGHALSLADKVNVGNVYINRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLTRFVTE
KTRTNNITAIGGNATLLSLGDAEE

Sequences:
NA

Specific function: NA

COG id: COG4230

COG function: function code C; Delta 1-pyrroline-5-carboxylate dehydrogenase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA