Click here to switch to the map view.

The map label for this gene is yajR [H]

Identifier: 114332411

GI number: 114332411

Start: 2578412

End: 2579818

Strand: Direct

Name: yajR [H]

Synonym: Neut_2460

Alternate gene names: 114332411

Gene position: 2578412-2579818 (Clockwise)

Preceding gene: 114332408

Following gene: 114332412

Centisome position: 96.89

GC content: 52.1

Gene sequence:

>1407_bases
ATGTCCGCAACACCTGCATCCAGAACAGCAACCAAACTTCCTGAAAAAATGTCCCGGGTGGAGCTGCGCGCATCCATCAG
TCTGGCAGGCGTCTATGCACTTCGCATGTTCGGTCTGTTCATTATTCTTCCGGTTTTTACTTTTTTCGCCAAAGATCTGC
CAGGAGGAGACAGTTACACGCTGATCGGTATCGCGCTGGGTGCTTACGGATTGACGCAGGCGATTCTGCAGATTCCATTC
GGCTGGCTGTCTGATCGCATCGGGCGCAAGCCGGTGGTGTATCTCGGCCTGATCCTGTTTGCCGTGGGCAGTTTTGTCGC
AGCATCAGCAACCGATATTTACTGGGTTATTTTCGGGCGCGTCATCCAGGGTGCCGGTGCTATTTCAGCCGCAGTCATGG
CGCTGGCAGCTGATTTGACACGGGAAGAACATCGCACCAAGGCGATGGCAATGATTGGAGTCAGCATCGGCGCAGTATTC
GCACTGTCACTGATATCTGCGCCTATCCTGAATCAATGGGTCGGCGTCCCGGGTATTTTCGCCATTACCGGCTGTCTGGC
CATATTGGCAATGCTGGTCGTGTACAAGGTAGTACCTGATCCGGTTATCAGCCGTTTTCACTCGGACACCGAGGTTACTA
CCAGCCGCTTTGGTAACGTGTTACGTGATCCGCAACTGCTGCGATTGAACTATGGGATTTTTGCCCTGCATGCGGTCCTG
ATGGCACTCTGGCTGGTGGTACCAGTATCCCTGCGGGAAACCGGCCTGGCCGCTGCCCACCACTGGCAAGTTTATTTGCC
CGTCATGGTAGGCGCGGTGATATTGATGGTGCCTGCCATTATTTATGCCGAGAAAAAAGCCCGGATGAAACCGGTTTTCA
TTGCTGCTGTGGCGTTATTGTTACTGGCACAGGTGTTACTGGCGATCTTCAACACTTCCTTTTGGGGACTGGTTTTCGCG
TTACTGGTCTTTTTCACCGCGTTTAATCTGCTCGAAGCAACACTGCCCTCACTGATCTCTAAAATTGCACCCGTTGGTGC
CAAGGGAACTGCCATTGGCGTTTACAGCAGCACCCAGTTTCTAGGTGCGTTTGTTGGCTCCGCCTTGGGCGGTTACTTGT
TCCAGCATTTTGGCTTTTACGCCATGGCGATCATGTGCAGCGGGTTGTTGATTATTTGGTTGATACTGGCCACCACCATG
CAGGCACCGGCAGCTGTCCGTTCCAAAATGTATCAGGTTGGAGAAATGAATTCCGAACAGGCCAATGCCTTATCACGCGA
ATTGGCAGCCCTGCCGGGAGTATATGAGGCGCTTGTACTGGCCAATGAACAGGTGGCTTATCTGAAGGTTGATCTCAAGG
GTTTTGATGAAGAAAAAGTGGTTCAGTTATTGGAAGGAAATAGATAA

Upstream 100 bases:

>100_bases
GCACCACGGATCCTGATGAATTCCATCGGCTACCTAAGAAAGAGTCAACCTGATAATATACCCAACTTCCCGCTTTTATC
ACAATTCACAATTACGCTTC

Downstream 100 bases:

>100_bases
ATGGCTTCACTAAATAAAGTTATGTTGATTGGCAATCTTGGCCGCGATCCGGAAATCCGTTACATGCCCAGCGGCGATGC
CATGGCAAATCTGAATATTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MSATPASRTATKLPEKMSRVELRASISLAGVYALRMFGLFIILPVFTFFAKDLPGGDSYTLIGIALGAYGLTQAILQIPF
GWLSDRIGRKPVVYLGLILFAVGSFVAASATDIYWVIFGRVIQGAGAISAAVMALAADLTREEHRTKAMAMIGVSIGAVF
ALSLISAPILNQWVGVPGIFAITGCLAILAMLVVYKVVPDPVISRFHSDTEVTTSRFGNVLRDPQLLRLNYGIFALHAVL
MALWLVVPVSLRETGLAAAHHWQVYLPVMVGAVILMVPAIIYAEKKARMKPVFIAAVALLLLAQVLLAIFNTSFWGLVFA
LLVFFTAFNLLEATLPSLISKIAPVGAKGTAIGVYSSTQFLGAFVGSALGGYLFQHFGFYAMAIMCSGLLIIWLILATTM
QAPAAVRSKMYQVGEMNSEQANALSRELAALPGVYEALVLANEQVAYLKVDLKGFDEEKVVQLLEGNR

Sequences:

>Translated_468_residues
MSATPASRTATKLPEKMSRVELRASISLAGVYALRMFGLFIILPVFTFFAKDLPGGDSYTLIGIALGAYGLTQAILQIPF
GWLSDRIGRKPVVYLGLILFAVGSFVAASATDIYWVIFGRVIQGAGAISAAVMALAADLTREEHRTKAMAMIGVSIGAVF
ALSLISAPILNQWVGVPGIFAITGCLAILAMLVVYKVVPDPVISRFHSDTEVTTSRFGNVLRDPQLLRLNYGIFALHAVL
MALWLVVPVSLRETGLAAAHHWQVYLPVMVGAVILMVPAIIYAEKKARMKPVFIAAVALLLLAQVLLAIFNTSFWGLVFA
LLVFFTAFNLLEATLPSLISKIAPVGAKGTAIGVYSSTQFLGAFVGSALGGYLFQHFGFYAMAIMCSGLLIIWLILATTM
QAPAAVRSKMYQVGEMNSEQANALSRELAALPGVYEALVLANEQVAYLKVDLKGFDEEKVVQLLEGNR
>Mature_467_residues
SATPASRTATKLPEKMSRVELRASISLAGVYALRMFGLFIILPVFTFFAKDLPGGDSYTLIGIALGAYGLTQAILQIPFG
WLSDRIGRKPVVYLGLILFAVGSFVAASATDIYWVIFGRVIQGAGAISAAVMALAADLTREEHRTKAMAMIGVSIGAVFA
LSLISAPILNQWVGVPGIFAITGCLAILAMLVVYKVVPDPVISRFHSDTEVTTSRFGNVLRDPQLLRLNYGIFALHAVLM
ALWLVVPVSLRETGLAAAHHWQVYLPVMVGAVILMVPAIIYAEKKARMKPVFIAAVALLLLAQVLLAIFNTSFWGLVFAL
LVFFTAFNLLEATLPSLISKIAPVGAKGTAIGVYSSTQFLGAFVGSALGGYLFQHFGFYAMAIMCSGLLIIWLILATTMQ
APAAVRSKMYQVGEMNSEQANALSRELAALPGVYEALVLANEQVAYLKVDLKGFDEEKVVQLLEGNR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=447, Percent_Identity=44.5190156599553, Blast_Score=360, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50344; Mature: 50212

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SATPASRTATKLPEKMSRVELRASISLAGVYALRMFGLFIILPVFTFFAKDLPGGDSYT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE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HHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]