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The map label for this gene is yicC [C]

Identifier: 114332329

GI number: 114332329

Start: 2488794

End: 2489672

Strand: Direct

Name: yicC [C]

Synonym: Neut_2372

Alternate gene names: 114332329

Gene position: 2488794-2489672 (Clockwise)

Preceding gene: 114332324

Following gene: 114332333

Centisome position: 93.53

GC content: 45.73

Gene sequence:

>879_bases
ATGGAAAAGTTCATGATTACAAGCATGACAGGTTATGCGGCAGCTTCCGCAGAAATTCCGCAAGGATCGCTGGCTTTGGA
ACTACGTTCAGTCAACAATCGCTATCTTGACCTGCAATTCAAGCTTCCTGACGAGTTTCGTGTACTGGAACCTGAGATGC
GGGATTTTCTAGGTACAGGCATAACGCGGGGAAAAGTAGATTGTCGCCTTACTTTTTCAATCTACTCAGGCACCTCCCGT
CACCAACGACTTAATCATGATCTATTGAATAATCTGCTGGCAATGAGTCGTGACGTCAAATCAATCTTTCCTGCAGCGAA
TGATCTTTCTGTTGCTGAAATTTTGCGCTGGCCCGGGGTACTTGATAGCGATCGGATTTCAGTCGATGAATTGCGTCCCC
CCTGCATGACACTGCTGCAGACTGCTTTACAAGAACTGGTTTTGGCTCGCAGGCGTGAAGGAGAAAAACTGCAAAACCTG
CTACTGGAACGCGTACAACAATTACGTCAACTGGTGCTAGATCTGTTACCCAGCCTACCAGCCATTCTGGCTGGTTTTCA
GGAAAGATTGCTAAACTGCTTAAAGACAGCTGGTCTTGATGAAAACGATGAACGTATCCGTCAGGAATTCACCTTGTTTG
CCAATAAAATTGATGTGGATGAAGAATTATCGCGTCTGCAGGGACACCTGAATGAATTTGAACATATCGTGCTGGCTGGT
GGCGTTGTCGGCAAACGGCTTGATTTTCTGACCCAGGAACTTAACCGGGAAGCCAATACATTGGCATCCAAGTCAGTTGC
CAGAGAAATCACTCGCATATCCATAGAAATGAAAGTTATGATTGAACAACTGCGCGAACAGATTCAAAACATAGAGTGA

Upstream 100 bases:

>100_bases
GAAATGTTAATATTCTCATTATGCTTATCTCCATGAATCAAAAATATAATTTAAGGGCTGAGTATAGCATCATCCCCAAT
CGCTCTGGACTACCCGTCGG

Downstream 100 bases:

>100_bases
TCCAAAAAGCACACCTGCTACAACTTTTTCAATACATATTTTTCTATTCTGGAAAATTCTGAAAAGTAATGCAGAGCAGC
CAGAATAGATAGTTTATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MEKFMITSMTGYAAASAEIPQGSLALELRSVNNRYLDLQFKLPDEFRVLEPEMRDFLGTGITRGKVDCRLTFSIYSGTSR
HQRLNHDLLNNLLAMSRDVKSIFPAANDLSVAEILRWPGVLDSDRISVDELRPPCMTLLQTALQELVLARRREGEKLQNL
LLERVQQLRQLVLDLLPSLPAILAGFQERLLNCLKTAGLDENDERIRQEFTLFANKIDVDEELSRLQGHLNEFEHIVLAG
GVVGKRLDFLTQELNREANTLASKSVAREITRISIEMKVMIEQLREQIQNIE

Sequences:

>Translated_292_residues
MEKFMITSMTGYAAASAEIPQGSLALELRSVNNRYLDLQFKLPDEFRVLEPEMRDFLGTGITRGKVDCRLTFSIYSGTSR
HQRLNHDLLNNLLAMSRDVKSIFPAANDLSVAEILRWPGVLDSDRISVDELRPPCMTLLQTALQELVLARRREGEKLQNL
LLERVQQLRQLVLDLLPSLPAILAGFQERLLNCLKTAGLDENDERIRQEFTLFANKIDVDEELSRLQGHLNEFEHIVLAG
GVVGKRLDFLTQELNREANTLASKSVAREITRISIEMKVMIEQLREQIQNIE
>Mature_292_residues
MEKFMITSMTGYAAASAEIPQGSLALELRSVNNRYLDLQFKLPDEFRVLEPEMRDFLGTGITRGKVDCRLTFSIYSGTSR
HQRLNHDLLNNLLAMSRDVKSIFPAANDLSVAEILRWPGVLDSDRISVDELRPPCMTLLQTALQELVLARRREGEKLQNL
LLERVQQLRQLVLDLLPSLPAILAGFQERLLNCLKTAGLDENDERIRQEFTLFANKIDVDEELSRLQGHLNEFEHIVLAG
GVVGKRLDFLTQELNREANTLASKSVAREITRISIEMKVMIEQLREQIQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=288, Percent_Identity=40.2777777777778, Blast_Score=203, Evalue=8e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33298; Mature: 33298

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKFMITSMTGYAAASAEIPQGSLALELRSVNNRYLDLQFKLPDEFRVLEPEMRDFLGTG
CCCEEEEECCCHHHCCCCCCCCHHEEEEECCCCEEEEEEEECCCHHHHCCHHHHHHHHCC
ITRGKVDCRLTFSIYSGTSRHQRLNHDLLNNLLAMSRDVKSIFPAANDLSVAEILRWPGV
CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
LDSDRISVDELRPPCMTLLQTALQELVLARRREGEKLQNLLLERVQQLRQLVLDLLPSLP
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AILAGFQERLLNCLKTAGLDENDERIRQEFTLFANKIDVDEELSRLQGHLNEFEHIVLAG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
GVVGKRLDFLTQELNREANTLASKSVAREITRISIEMKVMIEQLREQIQNIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKFMITSMTGYAAASAEIPQGSLALELRSVNNRYLDLQFKLPDEFRVLEPEMRDFLGTG
CCCEEEEECCCHHHCCCCCCCCHHEEEEECCCCEEEEEEEECCCHHHHCCHHHHHHHHCC
ITRGKVDCRLTFSIYSGTSRHQRLNHDLLNNLLAMSRDVKSIFPAANDLSVAEILRWPGV
CCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
LDSDRISVDELRPPCMTLLQTALQELVLARRREGEKLQNLLLERVQQLRQLVLDLLPSLP
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AILAGFQERLLNCLKTAGLDENDERIRQEFTLFANKIDVDEELSRLQGHLNEFEHIVLAG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
GVVGKRLDFLTQELNREANTLASKSVAREITRISIEMKVMIEQLREQIQNIE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]