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The map label for this gene is rsgA [H]

Identifier: 114332247

GI number: 114332247

Start: 2412497

End: 2413426

Strand: Reverse

Name: rsgA [H]

Synonym: Neut_2287

Alternate gene names: 114332247

Gene position: 2413426-2412497 (Counterclockwise)

Preceding gene: 114332248

Following gene: 114332243

Centisome position: 90.69

GC content: 47.96

Gene sequence:

>930_bases
TTGAGAGCCAGAGATATTGGCGTAAATAAAGCCGGATCGCCATTGCTCGGCAGGGTAGTAGCGGCCTATGGCCGTCATTT
TGAAGTCGAAACTGCACATACTATTTATTCCTGTGTTGTACGTGGTAAGAAAAAAGGAGTGGTATGTGGTGATTGGGTTG
AAATGCTTCCGACAACGGACGGCCAGGGTATTATCGAAACTATCCTGTCTCGTTCAAGCCTCTTTTATCGTAGCGAGCTC
TTTCGTGAAAAACTGATCGCGGCCAATGTCACGCAGTTGATTTTTGTGCTGGCGGTTGTTCCAACTTGTAATTTTGAATT
GCTTGATCGTTGTCTGATTGTTGCCGAAAACCAGGGAATCAAGTCGCTCATTATATTGAACAAGATCGACCTAATTGGCA
AGGATGTGCAAAGGCAGGTTGTTGCACAAAGCTTGGTGTTTTACCGGGAGCTGGGGTATCCCGTACTGGAGATCAGTGCG
GAAGCCAACGCTCAGCTACTTGTTCCGTTCCTGGGCGGACAGATCAGTCTATTGGCGGGGCAATCTGGTGTGGGCAAATC
CACGCTGCTTAACGCACTTATTCCAGTGGCGCAGCAGGCAACCGCAGAAATTTCCGATGCACTGGATAGCGGACGACACA
CGACTACCCATGTTCGTCTTTTTCATCTTGATACGAACAGTAGCATCATTGATTCCCCTGGTTTTCAGGAATTCGGTCTG
CAACAACTGGATGAAGAATCACTGGCATGGGGGTTTGTCGAATTTCGTCCTTTTCTGAAACAGTGCAAATTCCGGAATTG
CCGGCATGTTTCAGAGCCGGGTTGCAGATTATTGCAAGCGGCGCAGGAAGGTATTCTTAATTCACGCCGGTTAGCTTGTT
ACCATAAGTTGATGAAGTGCATAAAGGAATCCCTCCCTGGAGGGAGGTAA

Upstream 100 bases:

>100_bases
GTTATAACCAGTGCCGTGTAGAGTATACGACGCACGCCATTGGCGGATTATCGGAAAATGACTTTATCTGTGCGGCGAAA
GTCGATATGTTGCTCATATC

Downstream 100 bases:

>100_bases
ACAAAGGAAGCTGGCGATAAATAACCCGACAGGTGGTATTTGTCTGTTTTCCCGCCGGGCCCAGCCCCTGGTTACTCCAG
GCCGATCAATTCCACATCAA

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRARDIGVNKAGSPLLGRVVAAYGRHFEVETAHTIYSCVVRGKKKGVVCGDWVEMLPTTDGQGIIETILSRSSLFYRSEL
FREKLIAANVTQLIFVLAVVPTCNFELLDRCLIVAENQGIKSLIILNKIDLIGKDVQRQVVAQSLVFYRELGYPVLEISA
EANAQLLVPFLGGQISLLAGQSGVGKSTLLNALIPVAQQATAEISDALDSGRHTTTHVRLFHLDTNSSIIDSPGFQEFGL
QQLDEESLAWGFVEFRPFLKQCKFRNCRHVSEPGCRLLQAAQEGILNSRRLACYHKLMKCIKESLPGGR

Sequences:

>Translated_309_residues
MRARDIGVNKAGSPLLGRVVAAYGRHFEVETAHTIYSCVVRGKKKGVVCGDWVEMLPTTDGQGIIETILSRSSLFYRSEL
FREKLIAANVTQLIFVLAVVPTCNFELLDRCLIVAENQGIKSLIILNKIDLIGKDVQRQVVAQSLVFYRELGYPVLEISA
EANAQLLVPFLGGQISLLAGQSGVGKSTLLNALIPVAQQATAEISDALDSGRHTTTHVRLFHLDTNSSIIDSPGFQEFGL
QQLDEESLAWGFVEFRPFLKQCKFRNCRHVSEPGCRLLQAAQEGILNSRRLACYHKLMKCIKESLPGGR
>Mature_309_residues
MRARDIGVNKAGSPLLGRVVAAYGRHFEVETAHTIYSCVVRGKKKGVVCGDWVEMLPTTDGQGIIETILSRSSLFYRSEL
FREKLIAANVTQLIFVLAVVPTCNFELLDRCLIVAENQGIKSLIILNKIDLIGKDVQRQVVAQSLVFYRELGYPVLEISA
EANAQLLVPFLGGQISLLAGQSGVGKSTLLNALIPVAQQATAEISDALDSGRHTTTHVRLFHLDTNSSIIDSPGFQEFGL
QQLDEESLAWGFVEFRPFLKQCKFRNCRHVSEPGCRLLQAAQEGILNSRRLACYHKLMKCIKESLPGGR

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=310, Percent_Identity=38.0645161290323, Blast_Score=215, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 34112; Mature: 34112

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARDIGVNKAGSPLLGRVVAAYGRHFEVETAHTIYSCVVRGKKKGVVCGDWVEMLPTTD
CCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCC
GQGIIETILSRSSLFYRSELFREKLIAANVTQLIFVLAVVPTCNFELLDRCLIVAENQGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCC
KSLIILNKIDLIGKDVQRQVVAQSLVFYRELGYPVLEISAEANAQLLVPFLGGQISLLAG
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCEEEEEEC
QSGVGKSTLLNALIPVAQQATAEISDALDSGRHTTTHVRLFHLDTNSSIIDSPGFQEFGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCHHHCH
QQLDEESLAWGFVEFRPFLKQCKFRNCRHVSEPGCRLLQAAQEGILNSRRLACYHKLMKC
HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IKESLPGGR
HHHHCCCCC
>Mature Secondary Structure
MRARDIGVNKAGSPLLGRVVAAYGRHFEVETAHTIYSCVVRGKKKGVVCGDWVEMLPTTD
CCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCC
GQGIIETILSRSSLFYRSELFREKLIAANVTQLIFVLAVVPTCNFELLDRCLIVAENQGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCC
KSLIILNKIDLIGKDVQRQVVAQSLVFYRELGYPVLEISAEANAQLLVPFLGGQISLLAG
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCEEEEEEC
QSGVGKSTLLNALIPVAQQATAEISDALDSGRHTTTHVRLFHLDTNSSIIDSPGFQEFGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCHHHCH
QQLDEESLAWGFVEFRPFLKQCKFRNCRHVSEPGCRLLQAAQEGILNSRRLACYHKLMKC
HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IKESLPGGR
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]