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The map label for this gene is perM [C]

Identifier: 114332236

GI number: 114332236

Start: 2402552

End: 2403643

Strand: Reverse

Name: perM [C]

Synonym: Neut_2276

Alternate gene names: 114332236

Gene position: 2403643-2402552 (Counterclockwise)

Preceding gene: 114332241

Following gene: 114332235

Centisome position: 90.33

GC content: 44.32

Gene sequence:

>1092_bases
ATGGACAACAAATATTCCCCGGATTCCCGTTTTTTCTGGTATTTAGCGCTTATCGGCATTGTCAGCGCCCTGATTTATCT
GCTAAGTCCCATTCTCACGCCTTTTTTACTGGCAGCAGGTATTGCCTATATTTGTAATCCGATAGTTACCTGGCTTGAAG
TCAGAAAAGTTCCCAGGACGCTGAGTACCGTTTTTGTCATGCTGATGGCAATCGGTATTTTTATCACCATGATTTTGATT
ATGTTGCCATTGTTTGAAAAAGAGATCTCGCGTCTGATTGAGCGTATCCCTTCTTTTCTCGATATGCTTAGTAATCGCCT
TATCCCGTGGGTGGAAGGAGTTTTTAATATTGAATTGCAGATTGATGTTGATATGCTCAAGGATTTACTGGCAGAACACT
GGCAAAGTGCAGGTGGGGTGGCTGCCAGGGCACTGCCAACCTTGAAAAGTGGCGGGTTGGTGATACTGGGGTTTTTAATA
AATCTGATATTAGTACCAGTGGTACTGTTCTATCTGCTGCGAGACTGGAATATTCTGATTAAACAAGCGGGGGAGTTAAT
TCCGCCGGCATGGCAAAAACAGATCTTTACCGTATCCAGAGAAGCAGACGATGTGCTGGCTGAATTCATGCGTGGAGAAA
TAGCGGTAATCACCATCATGAGTATCTATTACGTAACGGGGTTATGGCTGGTTGGGTTAGAGTTCTCTTTACCGATTGGG
CTACTATCCGGTGTGCTGGTATTTGTGCCCTATCTGGGAACAATAACTGGTTTGACATTGGCGACTTTCGCTGCTCTGAC
ACAATTTCAGGAATGGAGCAGCATAATAATAGTTTGGGTTGTAATTGGATCAGGACAACTACTGGAAGGTATGCTGATTA
CTCCCAGATTAGTAGGAGAGCGGATTGGTTTACATCCGGTAGCAGTAATCTTTTCATTAATGGCGTTTGGTCAGCTATTT
GGTTTTATCGGGATTCTGCTAGCACTACCAATCAGCGCAATTCTGCTGGTTCTACTCAGGCATCTGCATACGCAGTATAT
GGAGGTCATGGAGGATGATGAAACTCGGGCGGCAAAGGTATGGCATGAATAA

Upstream 100 bases:

>100_bases
ATATGGTTTTTGTCAGGATCTGTAGAATTGGATACGGTCAAGTTGAGTTCTCGCAGTATTAAGACTAGAGTGCAGCCTTT
GAGGCATGATTTTACCGTAA

Downstream 100 bases:

>100_bases
ATACACCGAGCTGTCTCACTCTGAAATTCCTGCTTATTCTTGTCTTGACAAAATTATTATGAAGTTATGGTACGTATAGG
AGTAGTTATATGTGTTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MDNKYSPDSRFFWYLALIGIVSALIYLLSPILTPFLLAAGIAYICNPIVTWLEVRKVPRTLSTVFVMLMAIGIFITMILI
MLPLFEKEISRLIERIPSFLDMLSNRLIPWVEGVFNIELQIDVDMLKDLLAEHWQSAGGVAARALPTLKSGGLVILGFLI
NLILVPVVLFYLLRDWNILIKQAGELIPPAWQKQIFTVSREADDVLAEFMRGEIAVITIMSIYYVTGLWLVGLEFSLPIG
LLSGVLVFVPYLGTITGLTLATFAALTQFQEWSSIIIVWVVIGSGQLLEGMLITPRLVGERIGLHPVAVIFSLMAFGQLF
GFIGILLALPISAILLVLLRHLHTQYMEVMEDDETRAAKVWHE

Sequences:

>Translated_363_residues
MDNKYSPDSRFFWYLALIGIVSALIYLLSPILTPFLLAAGIAYICNPIVTWLEVRKVPRTLSTVFVMLMAIGIFITMILI
MLPLFEKEISRLIERIPSFLDMLSNRLIPWVEGVFNIELQIDVDMLKDLLAEHWQSAGGVAARALPTLKSGGLVILGFLI
NLILVPVVLFYLLRDWNILIKQAGELIPPAWQKQIFTVSREADDVLAEFMRGEIAVITIMSIYYVTGLWLVGLEFSLPIG
LLSGVLVFVPYLGTITGLTLATFAALTQFQEWSSIIIVWVVIGSGQLLEGMLITPRLVGERIGLHPVAVIFSLMAFGQLF
GFIGILLALPISAILLVLLRHLHTQYMEVMEDDETRAAKVWHE
>Mature_363_residues
MDNKYSPDSRFFWYLALIGIVSALIYLLSPILTPFLLAAGIAYICNPIVTWLEVRKVPRTLSTVFVMLMAIGIFITMILI
MLPLFEKEISRLIERIPSFLDMLSNRLIPWVEGVFNIELQIDVDMLKDLLAEHWQSAGGVAARALPTLKSGGLVILGFLI
NLILVPVVLFYLLRDWNILIKQAGELIPPAWQKQIFTVSREADDVLAEFMRGEIAVITIMSIYYVTGLWLVGLEFSLPIG
LLSGVLVFVPYLGTITGLTLATFAALTQFQEWSSIIIVWVVIGSGQLLEGMLITPRLVGERIGLHPVAVIFSLMAFGQLF
GFIGILLALPISAILLVLLRHLHTQYMEVMEDDETRAAKVWHE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=326, Percent_Identity=26.6871165644172, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI87082271, Length=334, Percent_Identity=26.0479041916168, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40640; Mature: 40640

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKYSPDSRFFWYLALIGIVSALIYLLSPILTPFLLAAGIAYICNPIVTWLEVRKVPRT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTVFVMLMAIGIFITMILIMLPLFEKEISRLIERIPSFLDMLSNRLIPWVEGVFNIELQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEE
IDVDMLKDLLAEHWQSAGGVAARALPTLKSGGLVILGFLINLILVPVVLFYLLRDWNILI
ECHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQAGELIPPAWQKQIFTVSREADDVLAEFMRGEIAVITIMSIYYVTGLWLVGLEFSLPIG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH
LLSGVLVFVPYLGTITGLTLATFAALTQFQEWSSIIIVWVVIGSGQLLEGMLITPRLVGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHH
RIGLHPVAVIFSLMAFGQLFGFIGILLALPISAILLVLLRHLHTQYMEVMEDDETRAAKV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
WHE
CCC
>Mature Secondary Structure
MDNKYSPDSRFFWYLALIGIVSALIYLLSPILTPFLLAAGIAYICNPIVTWLEVRKVPRT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTVFVMLMAIGIFITMILIMLPLFEKEISRLIERIPSFLDMLSNRLIPWVEGVFNIELQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEE
IDVDMLKDLLAEHWQSAGGVAARALPTLKSGGLVILGFLINLILVPVVLFYLLRDWNILI
ECHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQAGELIPPAWQKQIFTVSREADDVLAEFMRGEIAVITIMSIYYVTGLWLVGLEFSLPIG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH
LLSGVLVFVPYLGTITGLTLATFAALTQFQEWSSIIIVWVVIGSGQLLEGMLITPRLVGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHH
RIGLHPVAVIFSLMAFGQLFGFIGILLALPISAILLVLLRHLHTQYMEVMEDDETRAAKV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
WHE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]