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The map label for this gene is ydfM [H]

Identifier: 114332150

GI number: 114332150

Start: 2316879

End: 2317718

Strand: Direct

Name: ydfM [H]

Synonym: Neut_2185

Alternate gene names: 114332150

Gene position: 2316879-2317718 (Clockwise)

Preceding gene: 114332149

Following gene: 114332151

Centisome position: 87.07

GC content: 48.93

Gene sequence:

>840_bases
GTGCTTGATTCAGCGCAGCGTTTGCTCAATCCAGAAACCTTACTGCAGCCCACCCCCATTGTACTTTTGATTGCCGCGCT
TTCGATTGTTGCCAACGAGGGCCTCTTTCACTACACCATACGCGCTGCGCGCAAGTTTAATTCAAGTTTGCTAACGGCCA
ATGCCTGGCATCACCGCTCCGATGCAATCTCCTCGATTGTCGTGTTGATCGGTGTGACTGGCAGCTTACTTGGCTTGCCT
TACCTGGATGCCTTTGCTGCCCTTGGCGTGGCGTTAATGATCGGTAAAATTGGCTGGGATCAAACCTGGGCGTCTATTCG
AGAGTTAATTGATACGGGCATGGAGCCAAAAGCTGCCGCGGCGTTAAAACGTATCATCGAGACGATTGACTGTGTGCGAG
GTGTACATATGCTACGCAGCCGACGTATGGGCGGTGCTTATTTGATTGACGTACATATTGTTGTGAGCGAGCGTTTAAGT
GTTTCTGAAGGCCACAGGATTGCGGAGTATGTGCGTTTGAAATTGATTGGCTCACATGAAAATATTACTAATGTCCTGGT
TCATATTGATCCTGAAGATGATTCGGTCGCAGTATTGTGTGCGGACTTGCCGTTACGACGTGAGGTGCTGAGGGACTTGC
GTAAGGCATGGGCTGCAGATTTTGATTCATTCAAGTTAGACGAGGTGACATTGCACTATCTAAACGGCAAAGTGCATGTG
GATCTGGTCTGTACAGCCAATGCTGTCAATGCAAATGCTGGGCAATTAAGCCAACGATTACAAGAGCAGGCCGAGGTGCT
TGATTATATTGGTGACGTACGGGTGTACAGGCAGTGTTAA

Upstream 100 bases:

>100_bases
GTTTTATCAGTGAACAGCATTTGCAACAGTTGATTGATGAAGGACAGACGTTGCTTAATTTATAGGATATTTCTGTAGAT
TGCTTCTGTAGGTTGGTATC

Downstream 100 bases:

>100_bases
GGAGTTAGTTAAACATAGTTGTTCAGTCCCGGAGATTGTATAGATAAAGCTCGTTATCTGTTTAGTCCCACGGTGTGCCG
GTGTAACATATAACCAGCTA

Product: cation efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLDSAQRLLNPETLLQPTPIVLLIAALSIVANEGLFHYTIRAARKFNSSLLTANAWHHRSDAISSIVVLIGVTGSLLGLP
YLDAFAALGVALMIGKIGWDQTWASIRELIDTGMEPKAAAALKRIIETIDCVRGVHMLRSRRMGGAYLIDVHIVVSERLS
VSEGHRIAEYVRLKLIGSHENITNVLVHIDPEDDSVAVLCADLPLRREVLRDLRKAWAADFDSFKLDEVTLHYLNGKVHV
DLVCTANAVNANAGQLSQRLQEQAEVLDYIGDVRVYRQC

Sequences:

>Translated_279_residues
MLDSAQRLLNPETLLQPTPIVLLIAALSIVANEGLFHYTIRAARKFNSSLLTANAWHHRSDAISSIVVLIGVTGSLLGLP
YLDAFAALGVALMIGKIGWDQTWASIRELIDTGMEPKAAAALKRIIETIDCVRGVHMLRSRRMGGAYLIDVHIVVSERLS
VSEGHRIAEYVRLKLIGSHENITNVLVHIDPEDDSVAVLCADLPLRREVLRDLRKAWAADFDSFKLDEVTLHYLNGKVHV
DLVCTANAVNANAGQLSQRLQEQAEVLDYIGDVRVYRQC
>Mature_279_residues
MLDSAQRLLNPETLLQPTPIVLLIAALSIVANEGLFHYTIRAARKFNSSLLTANAWHHRSDAISSIVVLIGVTGSLLGLP
YLDAFAALGVALMIGKIGWDQTWASIRELIDTGMEPKAAAALKRIIETIDCVRGVHMLRSRRMGGAYLIDVHIVVSERLS
VSEGHRIAEYVRLKLIGSHENITNVLVHIDPEDDSVAVLCADLPLRREVLRDLRKAWAADFDSFKLDEVTLHYLNGKVHV
DLVCTANAVNANAGQLSQRLQEQAEVLDYIGDVRVYRQC

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6325032, Length=94, Percent_Identity=39.3617021276596, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 30847; Mature: 30847

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDSAQRLLNPETLLQPTPIVLLIAALSIVANEGLFHYTIRAARKFNSSLLTANAWHHRS
CCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEECCCCHHHH
DAISSIVVLIGVTGSLLGLPYLDAFAALGVALMIGKIGWDQTWASIRELIDTGMEPKAAA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH
ALKRIIETIDCVRGVHMLRSRRMGGAYLIDVHIVVSERLSVSEGHRIAEYVRLKLIGSHE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHEECCCC
NITNVLVHIDPEDDSVAVLCADLPLRREVLRDLRKAWAADFDSFKLDEVTLHYLNGKVHV
CCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCEEEE
DLVCTANAVNANAGQLSQRLQEQAEVLDYIGDVRVYRQC
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDSAQRLLNPETLLQPTPIVLLIAALSIVANEGLFHYTIRAARKFNSSLLTANAWHHRS
CCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHEECCCCHHHH
DAISSIVVLIGVTGSLLGLPYLDAFAALGVALMIGKIGWDQTWASIRELIDTGMEPKAAA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH
ALKRIIETIDCVRGVHMLRSRRMGGAYLIDVHIVVSERLSVSEGHRIAEYVRLKLIGSHE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHEECCCC
NITNVLVHIDPEDDSVAVLCADLPLRREVLRDLRKAWAADFDSFKLDEVTLHYLNGKVHV
CCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCEEEE
DLVCTANAVNANAGQLSQRLQEQAEVLDYIGDVRVYRQC
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]