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The map label for this gene is 114332145

Identifier: 114332145

GI number: 114332145

Start: 2309088

End: 2310005

Strand: Reverse

Name: 114332145

Synonym: Neut_2180

Alternate gene names: NA

Gene position: 2310005-2309088 (Counterclockwise)

Preceding gene: 114332146

Following gene: 114332144

Centisome position: 86.81

GC content: 54.03

Gene sequence:

>918_bases
ATGAGTGACTGGGACTGGAAACCCTATGTGCCAGTGGCTAAACGGCGTGAACAGGCCAGCCGCGTTGTGGAGAAGGCAAG
GAAGGCCGGCAAGGATTTATTTCCTGTTGTAGTAGCTTCGCACACCATCGCCAGAACTTTCTGGGGCAAAGCCTGGTGCG
CTAATCTAGAGACTTATAGCGACTATGAAAGCCGTTTGCCGCGCGGACGTGCCTATGTGCGTAATGGTGCGGTGATTGAT
TTAAAGATTGAGCCGGGTCGGGTGATTGCACAGGTAATAGGTTCTCGTCGTTACCGGGTCGAGATCGGTATCGTACCGCT
TCCTGTCACCAGGTGGAAGAAACTGGTTGAGGACTGTACGGGCTCTATCGCCACACTGCTGGAGCTGCTGCAAGGAAAAT
TTTCCAAAGCCGTTATGGCGCGCCTGTGTGAACCAAAGAGCGGGATGTTTCCATTGCTGCAGGAGATCAGTCTTGGCTGC
TCCTGTCCCGATTGGGCAACGATGTGTAAACATGTTGCCGCAGTGCTCTATGGTGTCGGTGCACGGCTGGATGAACAGCC
CGAGTTGCTGTTCGTGCTGCGTCAGGTGGATGCCAATGACTTGCTGACTGCCCAGGTTGCAGTTATTCCTGCTAAGGTGA
AGGAGTCCGCGAAGGCAAAGGTGCTTGATGATGCTGCATTGGCGGATGTATTTGGTATCGAGATGGCTGCGTTGGGTGTT
TCGACCGATGCTCCGGTTGAGCAGGCGCCCGGGAAGCGACAAGTGGCGACTGTGACGAAAACAGCAAAGGCAACAAAAGC
AGCGGCGGTAACAACCGTTTCGGAACCCGAAAAGAATGTAGCTGCAAAGACAGCTCGGGCAGTTGTCACGAAGAAGAAGG
TTGTCACTTCCAGGGTTGCCGCACAGCGAGACAAATGA

Upstream 100 bases:

>100_bases
TGTGGTTGAAGGAAACGGAGAAATCAATCTCACTGAGATGAGCGATGAAGCATTGCTCGATCTGGTGAAGCTGGATATTC
ATGTAGCAGGGGGATGATTT

Downstream 100 bases:

>100_bases
TCAGTGTGTGACAGGCATGGACCCGGTTTCCTTGGGAATAGCTGCGCGTGCTATCATCAACCAGCAAAAAATATTTTTTT
TTCAGTAACGTATCTCAATT

Product: zinc finger, SWIM-type

Products: NA

Alternate protein names: Zinc Finger SWIM Domain Protein; Zinc Finger SWIM-Type; SWIM Zinc Finger Domain-Containing Protein; SWIM Zinc Finger Domain Protein; Zinc Finger Protein; Swim Zinc Finger Domain Protein; Non-Specific Serine/Threonine Protein Kinase; SNF2 Family Helicase; Helicase SNF2 Family; Zinc Finger Domain-Containing Protein; SWIM Zinc Finger Containing Protein; Zinc Finger Swim Domain-Containing Protein; Helicase; SNF2-Related Protein; SWIM Zinc-Finger Protein; Swim Zn-Finger Containing Protein

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSDWDWKPYVPVAKRREQASRVVEKARKAGKDLFPVVVASHTIARTFWGKAWCANLETYSDYESRLPRGRAYVRNGAVID
LKIEPGRVIAQVIGSRRYRVEIGIVPLPVTRWKKLVEDCTGSIATLLELLQGKFSKAVMARLCEPKSGMFPLLQEISLGC
SCPDWATMCKHVAAVLYGVGARLDEQPELLFVLRQVDANDLLTAQVAVIPAKVKESAKAKVLDDAALADVFGIEMAALGV
STDAPVEQAPGKRQVATVTKTAKATKAAAVTTVSEPEKNVAAKTARAVVTKKKVVTSRVAAQRDK

Sequences:

>Translated_305_residues
MSDWDWKPYVPVAKRREQASRVVEKARKAGKDLFPVVVASHTIARTFWGKAWCANLETYSDYESRLPRGRAYVRNGAVID
LKIEPGRVIAQVIGSRRYRVEIGIVPLPVTRWKKLVEDCTGSIATLLELLQGKFSKAVMARLCEPKSGMFPLLQEISLGC
SCPDWATMCKHVAAVLYGVGARLDEQPELLFVLRQVDANDLLTAQVAVIPAKVKESAKAKVLDDAALADVFGIEMAALGV
STDAPVEQAPGKRQVATVTKTAKATKAAAVTTVSEPEKNVAAKTARAVVTKKKVVTSRVAAQRDK
>Mature_304_residues
SDWDWKPYVPVAKRREQASRVVEKARKAGKDLFPVVVASHTIARTFWGKAWCANLETYSDYESRLPRGRAYVRNGAVIDL
KIEPGRVIAQVIGSRRYRVEIGIVPLPVTRWKKLVEDCTGSIATLLELLQGKFSKAVMARLCEPKSGMFPLLQEISLGCS
CPDWATMCKHVAAVLYGVGARLDEQPELLFVLRQVDANDLLTAQVAVIPAKVKESAKAKVLDDAALADVFGIEMAALGVS
TDAPVEQAPGKRQVATVTKTAKATKAAAVTTVSEPEKNVAAKTARAVVTKKKVVTSRVAAQRDK

Specific function: Unknown

COG id: COG4279

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33226; Mature: 33095

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDWDWKPYVPVAKRREQASRVVEKARKAGKDLFPVVVASHTIARTFWGKAWCANLETYS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
DYESRLPRGRAYVRNGAVIDLKIEPGRVIAQVIGSRRYRVEIGIVPLPVTRWKKLVEDCT
HHHHHCCCCHHEEECCCEEEEEECCHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHC
GSIATLLELLQGKFSKAVMARLCEPKSGMFPLLQEISLGCSCPDWATMCKHVAAVLYGVG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
ARLDEQPELLFVLRQVDANDLLTAQVAVIPAKVKESAKAKVLDDAALADVFGIEMAALGV
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
STDAPVEQAPGKRQVATVTKTAKATKAAAVTTVSEPEKNVAAKTARAVVTKKKVVTSRVA
CCCCCHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQRDK
HHCCC
>Mature Secondary Structure 
SDWDWKPYVPVAKRREQASRVVEKARKAGKDLFPVVVASHTIARTFWGKAWCANLETYS
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
DYESRLPRGRAYVRNGAVIDLKIEPGRVIAQVIGSRRYRVEIGIVPLPVTRWKKLVEDCT
HHHHHCCCCHHEEECCCEEEEEECCHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHC
GSIATLLELLQGKFSKAVMARLCEPKSGMFPLLQEISLGCSCPDWATMCKHVAAVLYGVG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
ARLDEQPELLFVLRQVDANDLLTAQVAVIPAKVKESAKAKVLDDAALADVFGIEMAALGV
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
STDAPVEQAPGKRQVATVTKTAKATKAAAVTTVSEPEKNVAAKTARAVVTKKKVVTSRVA
CCCCCHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQRDK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA