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The map label for this gene is rfaB [C]

Identifier: 114332080

GI number: 114332080

Start: 2238264

End: 2239379

Strand: Reverse

Name: rfaB [C]

Synonym: Neut_2115

Alternate gene names: 114332080

Gene position: 2239379-2238264 (Counterclockwise)

Preceding gene: 114332081

Following gene: 114332079

Centisome position: 84.15

GC content: 51.61

Gene sequence:

>1116_bases
ATGCATATTGCCATATATCTCCCGTCTCTGCGTGGCGGTGGTGCTGAACGGGCTATGGTTACACTGGCCAATGGTTTTGC
TGATAAAGGGCTGAAGGTGGATCTTGTGCTGGCCTGTGCCGAGGGTCCTTATCTTTCTGAAGTTTCACCCGGAGTGCGTG
TAGTAGACTTGCAATCCAATCGGGTACTGACTAGCCTGCCTGCTCTGGTGCGATATCTGCGCCGGGAGCGACCCCAGGCA
ATGTTATCTGCCCTTAACCATGCGAATGTGATTGCTGTTGTGGCGCGGATGCTGGCTGGGATACCTGTCCGTTTGGTAGT
AAGTGAACGTAACAATATTTCATTATCTGGCAGCTCCTTAAAGAATTTGCGCTCGCGCGTAGTATTTCACATGATGCAGT
GGGCCTATCGCAGAGCAGATGGTGTGACGGCAGTCTCCGGAGGCGTGGCGGATGATCTGGCAAAAGCCATCAACTTGCCA
CGTGATCGGATATCTGTGGTTTTCAACCCCGTGGTAACACCAGAGTTGATCAAAAAATCCAGGATGCCATTGGATCATCC
GTGGTTGGGAGAGGGCAAACCACCTGTTATTCTGGGTGTGGGGAGGCTCACACCGCAAAAAGATTTCGCTACCTTGATTC
GTGCTTTTACCCAGGTACGCGCTGCGCACGACTGTCGCCTTGTGATCCTGGGAGAAGGTGAGTTACGGGTGGAGCTGGAG
ATGCTGGCAACATCTCTTGGGATACGGGATAGTATCCAGTTTCCAGGTTTTGCTGAAAATCCCTTTGCATGGATGAGTCG
TGTACGGTTGTTTGTGTTGTCTTCCAGGTGGGAGGGGCTGCCGAATGTGCTGATTCAGGCAATGGCTTGTGGTGCGGCAG
TAGTGAGTACTGACTGCCCGAGTGGGCCGGATGAAATCTTGGAAGGAGGGAAATGGGGAAAGCTGGTACCGGTGGGGGAT
GTGAACGCATTGGCGAAAGCGATGACTATCTCACTGGAAGCTCCTGGTGATCAGTTGCCTGATGTACGCCACCGATCTAG
TGATTTTAAACAGGGGCTGGCTGTTGGCGCTTATCTGAATGTAATGCGTGAAGATCAAAGTAAAAAATATAATTAG

Upstream 100 bases:

>100_bases
CTGGCTATTGGAAAAACGACATGACGTGGGCAGGGGGAAGTTTCTATCTGGAAGATTTCATGATTGATGATTTGATCATG
TCTTCAGTAGAGAGGAACTA

Downstream 100 bases:

>100_bases
CAAGACTACATTAGATGCCATTCCAGTTATTGGATTTGCCTTGGTTGTGGTTGCCGTACCATGGGAAGAAATTTTTCGTG
CTGTTAATGGCTATGGATTC

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MHIAIYLPSLRGGGAERAMVTLANGFADKGLKVDLVLACAEGPYLSEVSPGVRVVDLQSNRVLTSLPALVRYLRRERPQA
MLSALNHANVIAVVARMLAGIPVRLVVSERNNISLSGSSLKNLRSRVVFHMMQWAYRRADGVTAVSGGVADDLAKAINLP
RDRISVVFNPVVTPELIKKSRMPLDHPWLGEGKPPVILGVGRLTPQKDFATLIRAFTQVRAAHDCRLVILGEGELRVELE
MLATSLGIRDSIQFPGFAENPFAWMSRVRLFVLSSRWEGLPNVLIQAMACGAAVVSTDCPSGPDEILEGGKWGKLVPVGD
VNALAKAMTISLEAPGDQLPDVRHRSSDFKQGLAVGAYLNVMREDQSKKYN

Sequences:

>Translated_371_residues
MHIAIYLPSLRGGGAERAMVTLANGFADKGLKVDLVLACAEGPYLSEVSPGVRVVDLQSNRVLTSLPALVRYLRRERPQA
MLSALNHANVIAVVARMLAGIPVRLVVSERNNISLSGSSLKNLRSRVVFHMMQWAYRRADGVTAVSGGVADDLAKAINLP
RDRISVVFNPVVTPELIKKSRMPLDHPWLGEGKPPVILGVGRLTPQKDFATLIRAFTQVRAAHDCRLVILGEGELRVELE
MLATSLGIRDSIQFPGFAENPFAWMSRVRLFVLSSRWEGLPNVLIQAMACGAAVVSTDCPSGPDEILEGGKWGKLVPVGD
VNALAKAMTISLEAPGDQLPDVRHRSSDFKQGLAVGAYLNVMREDQSKKYN
>Mature_371_residues
MHIAIYLPSLRGGGAERAMVTLANGFADKGLKVDLVLACAEGPYLSEVSPGVRVVDLQSNRVLTSLPALVRYLRRERPQA
MLSALNHANVIAVVARMLAGIPVRLVVSERNNISLSGSSLKNLRSRVVFHMMQWAYRRADGVTAVSGGVADDLAKAINLP
RDRISVVFNPVVTPELIKKSRMPLDHPWLGEGKPPVILGVGRLTPQKDFATLIRAFTQVRAAHDCRLVILGEGELRVELE
MLATSLGIRDSIQFPGFAENPFAWMSRVRLFVLSSRWEGLPNVLIQAMACGAAVVSTDCPSGPDEILEGGKWGKLVPVGD
VNALAKAMTISLEAPGDQLPDVRHRSSDFKQGLAVGAYLNVMREDQSKKYN

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=332, Percent_Identity=23.1927710843373, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40344; Mature: 40344

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIAIYLPSLRGGGAERAMVTLANGFADKGLKVDLVLACAEGPYLSEVSPGVRVVDLQSN
CEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCC
RVLTSLPALVRYLRRERPQAMLSALNHANVIAVVARMLAGIPVRLVVSERNNISLSGSSL
CHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCEEECCHHH
KNLRSRVVFHMMQWAYRRADGVTAVSGGVADDLAKAINLPRDRISVVFNPVVTPELIKKS
HHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCHHHHHEEECCCCCHHHHHHC
RMPLDHPWLGEGKPPVILGVGRLTPQKDFATLIRAFTQVRAAHDCRLVILGEGELRVELE
CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEHH
MLATSLGIRDSIQFPGFAENPFAWMSRVRLFVLSSRWEGLPNVLIQAMACGAAVVSTDCP
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCC
SGPDEILEGGKWGKLVPVGDVNALAKAMTISLEAPGDQLPDVRHRSSDFKQGLAVGAYLN
CCHHHHHCCCCCCCEEECCCHHHHHHHHEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHH
VMREDQSKKYN
HHHHHHCCCCC
>Mature Secondary Structure
MHIAIYLPSLRGGGAERAMVTLANGFADKGLKVDLVLACAEGPYLSEVSPGVRVVDLQSN
CEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCC
RVLTSLPALVRYLRRERPQAMLSALNHANVIAVVARMLAGIPVRLVVSERNNISLSGSSL
CHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCEEECCHHH
KNLRSRVVFHMMQWAYRRADGVTAVSGGVADDLAKAINLPRDRISVVFNPVVTPELIKKS
HHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCHHHHHEEECCCCCHHHHHHC
RMPLDHPWLGEGKPPVILGVGRLTPQKDFATLIRAFTQVRAAHDCRLVILGEGELRVELE
CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEHH
MLATSLGIRDSIQFPGFAENPFAWMSRVRLFVLSSRWEGLPNVLIQAMACGAAVVSTDCP
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCC
SGPDEILEGGKWGKLVPVGDVNALAKAMTISLEAPGDQLPDVRHRSSDFKQGLAVGAYLN
CCHHHHHCCCCCCCEEECCCHHHHHHHHEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHH
VMREDQSKKYN
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]