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The map label for this gene is fecI [C]

Identifier: 114332055

GI number: 114332055

Start: 2213893

End: 2214402

Strand: Direct

Name: fecI [C]

Synonym: Neut_2090

Alternate gene names: 114332055

Gene position: 2213893-2214402 (Clockwise)

Preceding gene: 114332052

Following gene: 114332056

Centisome position: 83.2

GC content: 50.0

Gene sequence:

>510_bases
ATGTCTTCATCGGATTCCCCCGTATTTACAGCACTTTATAAACAATACCAGTCACAATTGATCAGTCGCATCACCTGTCT
GGTCGGTTGCCGTGAAACAGCAGCTGATCTCGCCCAGGAAGCCTATATCCGGTTACTGGGCCACCGCGATTTATCGAATA
TATTGAGTTTGTCCGCTTATCTGTTCCGGATCGGCCATAACCTGGCGATGGATCACCAGCGTGACCCCTTAAATAAAATA
GAATACCTGCTGCTCGACGAAACCCTGCCCTGCCCGCTGCTCCAGCCGCATGAAATCGTGAGTCTCCGGCAGCAATGCAG
ACTATTACTGGATACGATCGCCTCTATGCCGCAAGGTTGCCGTGATGTTTTTCTGCTGCGTAAAATCGATGAGCTCAGTT
ACAGTGAAATCTCCATCCATCTCAATATTTCCGAGAAAACCGTGCAACGACGTCTGGTACAGGCTATGTTGCGTTGCCAC
CGCAGCATGAACCGTATGACCGACCGGTAA

Upstream 100 bases:

>100_bases
TCTTCCTGCGACAATTTGTCGCATTCTCATTTCCTGCTTTTGTCCGGATAATTTGATCCGGACAAACAATGGTTATTATG
ACTCTTTTCGCTACTGCATC

Downstream 100 bases:

>100_bases
TACTATATGTCCGCTTCCGGCCCTCCTGACGAACAGCTGCTCAAACAGGCACTGAAGTGGTTTTTTCTATTACAGTCTGA
ACACTGTACGGATGAAGACA

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor FecI; RNA Polymerase Sigma Factor FecI Family; RNA Polymerase Sigma-70 Family Protein; ECF Subfamily RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma-70 Factor; ECF-Sigma Factor; RNA Polymerase ECF-Family Sigma Factor

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSSSDSPVFTALYKQYQSQLISRITCLVGCRETAADLAQEAYIRLLGHRDLSNILSLSAYLFRIGHNLAMDHQRDPLNKI
EYLLLDETLPCPLLQPHEIVSLRQQCRLLLDTIASMPQGCRDVFLLRKIDELSYSEISIHLNISEKTVQRRLVQAMLRCH
RSMNRMTDR

Sequences:

>Translated_169_residues
MSSSDSPVFTALYKQYQSQLISRITCLVGCRETAADLAQEAYIRLLGHRDLSNILSLSAYLFRIGHNLAMDHQRDPLNKI
EYLLLDETLPCPLLQPHEIVSLRQQCRLLLDTIASMPQGCRDVFLLRKIDELSYSEISIHLNISEKTVQRRLVQAMLRCH
RSMNRMTDR
>Mature_168_residues
SSSDSPVFTALYKQYQSQLISRITCLVGCRETAADLAQEAYIRLLGHRDLSNILSLSAYLFRIGHNLAMDHQRDPLNKIE
YLLLDETLPCPLLQPHEIVSLRQQCRLLLDTIASMPQGCRDVFLLRKIDELSYSEISIHLNISEKTVQRRLVQAMLRCHR
SMNRMTDR

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19516; Mature: 19385

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSDSPVFTALYKQYQSQLISRITCLVGCRETAADLAQEAYIRLLGHRDLSNILSLSAY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LFRIGHNLAMDHQRDPLNKIEYLLLDETLPCPLLQPHEIVSLRQQCRLLLDTIASMPQGC
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
RDVFLLRKIDELSYSEISIHLNISEKTVQRRLVQAMLRCHRSMNRMTDR
HHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSSDSPVFTALYKQYQSQLISRITCLVGCRETAADLAQEAYIRLLGHRDLSNILSLSAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LFRIGHNLAMDHQRDPLNKIEYLLLDETLPCPLLQPHEIVSLRQQCRLLLDTIASMPQGC
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
RDVFLLRKIDELSYSEISIHLNISEKTVQRRLVQAMLRCHRSMNRMTDR
HHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA