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The map label for this gene is (amoB1 [H]

Identifier: 114332042

GI number: 114332042

Start: 2196913

End: 2198178

Strand: Reverse

Name: (amoB1 [H]

Synonym: Neut_2076

Alternate gene names: 114332042

Gene position: 2198178-2196913 (Counterclockwise)

Preceding gene: 114332043

Following gene: 114332041

Centisome position: 82.61

GC content: 47.47

Gene sequence:

>1266_bases
ATGGGTATCAAGAACCTTTATAAACGTGGAATGATGGGACTTTGTGGCGTTGCTGTTTATGCAATGGCGGCACTGACCAT
GACAGTGACACTAGATATCTCAACAGTAGCAGCCCATGGAGAACGATCCCAGGAACCGTTTCTTCGGATGCGTACAGTAC
AGTGGTACGATGTTAAATGGGGTCCGGAAGTAACCAAAGTCAATGAGAATGCCCAAATTACCGGCAAATTTCATTTGGCT
GAAGACTGGCCGCGTGCGGCAGCAAGACCGGATTTCGCATTCTTTAACGTAGGTAGCCCAAGTTCGGTATACGTGCGTTT
GAGTACGAAGATTAATGGCCACCCATGGTTTATTTCAGGTCCGCTGCAAATTGGTCGTGACTATGCGTTCGAAGTTCAGC
TGAGAGCACGTATTCCAGGACGCCATCACATGCACGCCATGTTAAACGTTAAAGATGCAGGTCCAATTGCAGGACCGGGT
GCATGGATGAACGTTACCGGAAGCTGGGATGATTTTACTAATCCACTCAAGCTGCTGACAGGCGAAACAATTGACTCGGA
AACATTCAACCTGTCAAACGGTATTTTCTGGCATATTCTCTGGATGTCAATTGGTATATTCTGGATTGGTATCTTTGTAG
CGCGTCCGATGTTCCTGCCACGTAGCCGGGTATTGCTCGCTTATGGTGATGATCTGTTGCTGGATCCGATGGATAAGAAA
ATCACCTGGGTACTTGCAATCCTGACCTTGGCGATAGTATGGGGTGGATACCGCTATACAGAAACCAAGCATCCATACAC
AGTACCTATCCAGGCTGGTCAATCCAAAGTTGCACCATTACCGGTAGCACCAAATCCGGTAGCAATCAAAATTACAGATG
CTAACTATGACGTACCGGGACGTGCACTGCGTGTATCAATGGAAGTAACCAACAACGGTGATACACCAGTTACATTTGGT
GAATTTACCACAGCAGGTATTCGTTTCGTTAACAGTACCGGCCGCAAGTACCTGGATCCACAGTATCCTCGTGAACTGGT
TGCAGTAGGCTTGAATTTTGATGATGATGGTGCAATTCAGCCAGGCGAGACCAAGCAATTGAGGATGGAAGCCAAAGATG
CTCTGTGGGAAATCCAACGTCTGATGGCGTTGCTGGGTGACCCGGAAAGCCGTTTTGGCGGACTGTTAATGTCTTGGGAT
TCAGAAGGTAATCGCCATATCAACAGTATTGCTGGTCCGGTGATTCCAGTCTTTACCAAGCTCTAA

Upstream 100 bases:

>100_bases
ACAGCCTTCTTCTACGTTAAAGGTAAAAGAGGACGTATCGTACAGCGCAATGATGTTACGGCATTTGGTGAAGAAGGGTT
TCCAGAGGGGATCAAATAAA

Downstream 100 bases:

>100_bases
TAGACAGTACCGAGGTACTGCGTATTAGTTAATAAGAACCGGTACATCGCCTGTCGCAAGGCAGAGGTGTACCGGTTTTT
TTATTGTGATTCTGATTTTG

Product: ammonia monooxygenase/methane monooxygenase, subunit B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MGIKNLYKRGMMGLCGVAVYAMAALTMTVTLDISTVAAHGERSQEPFLRMRTVQWYDVKWGPEVTKVNENAQITGKFHLA
EDWPRAAARPDFAFFNVGSPSSVYVRLSTKINGHPWFISGPLQIGRDYAFEVQLRARIPGRHHMHAMLNVKDAGPIAGPG
AWMNVTGSWDDFTNPLKLLTGETIDSETFNLSNGIFWHILWMSIGIFWIGIFVARPMFLPRSRVLLAYGDDLLLDPMDKK
ITWVLAILTLAIVWGGYRYTETKHPYTVPIQAGQSKVAPLPVAPNPVAIKITDANYDVPGRALRVSMEVTNNGDTPVTFG
EFTTAGIRFVNSTGRKYLDPQYPRELVAVGLNFDDDGAIQPGETKQLRMEAKDALWEIQRLMALLGDPESRFGGLLMSWD
SEGNRHINSIAGPVIPVFTKL

Sequences:

>Translated_421_residues
MGIKNLYKRGMMGLCGVAVYAMAALTMTVTLDISTVAAHGERSQEPFLRMRTVQWYDVKWGPEVTKVNENAQITGKFHLA
EDWPRAAARPDFAFFNVGSPSSVYVRLSTKINGHPWFISGPLQIGRDYAFEVQLRARIPGRHHMHAMLNVKDAGPIAGPG
AWMNVTGSWDDFTNPLKLLTGETIDSETFNLSNGIFWHILWMSIGIFWIGIFVARPMFLPRSRVLLAYGDDLLLDPMDKK
ITWVLAILTLAIVWGGYRYTETKHPYTVPIQAGQSKVAPLPVAPNPVAIKITDANYDVPGRALRVSMEVTNNGDTPVTFG
EFTTAGIRFVNSTGRKYLDPQYPRELVAVGLNFDDDGAIQPGETKQLRMEAKDALWEIQRLMALLGDPESRFGGLLMSWD
SEGNRHINSIAGPVIPVFTKL
>Mature_420_residues
GIKNLYKRGMMGLCGVAVYAMAALTMTVTLDISTVAAHGERSQEPFLRMRTVQWYDVKWGPEVTKVNENAQITGKFHLAE
DWPRAAARPDFAFFNVGSPSSVYVRLSTKINGHPWFISGPLQIGRDYAFEVQLRARIPGRHHMHAMLNVKDAGPIAGPGA
WMNVTGSWDDFTNPLKLLTGETIDSETFNLSNGIFWHILWMSIGIFWIGIFVARPMFLPRSRVLLAYGDDLLLDPMDKKI
TWVLAILTLAIVWGGYRYTETKHPYTVPIQAGQSKVAPLPVAPNPVAIKITDANYDVPGRALRVSMEVTNNGDTPVTFGE
FTTAGIRFVNSTGRKYLDPQYPRELVAVGLNFDDDGAIQPGETKQLRMEAKDALWEIQRLMALLGDPESRFGGLLMSWDS
EGNRHINSIAGPVIPVFTKL

Specific function: Plays a key role in the nitrogen cycle and degrades a wide range of hydrocarbons and halogenated hydrocarbons [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006833
- InterPro:   IPR023141 [H]

Pfam domain/function: PF04744 Monooxygenase_B [H]

EC number: NA

Molecular weight: Translated: 46881; Mature: 46749

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIKNLYKRGMMGLCGVAVYAMAALTMTVTLDISTVAAHGERSQEPFLRMRTVQWYDVKW
CCHHHHHHHCCHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEC
GPEVTKVNENAQITGKFHLAEDWPRAAARPDFAFFNVGSPSSVYVRLSTKINGHPWFISG
CCCEEEECCCCEEEEEEEECCCCCHHCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEC
PLQIGRDYAFEVQLRARIPGRHHMHAMLNVKDAGPIAGPGAWMNVTGSWDDFTNPLKLLT
HHHCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHC
GETIDSETFNLSNGIFWHILWMSIGIFWIGIFVARPMFLPRSRVLLAYGDDLLLDPMDKK
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCHH
ITWVLAILTLAIVWGGYRYTETKHPYTVPIQAGQSKVAPLPVAPNPVAIKITDANYDVPG
HHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCC
RALRVSMEVTNNGDTPVTFGEFTTAGIRFVNSTGRKYLDPQYPRELVAVGLNFDDDGAIQ
CEEEEEEEEECCCCCCEEECCCCEEHEEEEECCCCCCCCCCCCHHHEEEECCCCCCCCCC
PGETKQLRMEAKDALWEIQRLMALLGDPESRFGGLLMSWDSEGNRHINSIAGPVIPVFTK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCHHHHCCCHHHHHCC
L
C
>Mature Secondary Structure 
GIKNLYKRGMMGLCGVAVYAMAALTMTVTLDISTVAAHGERSQEPFLRMRTVQWYDVKW
CHHHHHHHCCHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEC
GPEVTKVNENAQITGKFHLAEDWPRAAARPDFAFFNVGSPSSVYVRLSTKINGHPWFISG
CCCEEEECCCCEEEEEEEECCCCCHHCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEC
PLQIGRDYAFEVQLRARIPGRHHMHAMLNVKDAGPIAGPGAWMNVTGSWDDFTNPLKLLT
HHHCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHC
GETIDSETFNLSNGIFWHILWMSIGIFWIGIFVARPMFLPRSRVLLAYGDDLLLDPMDKK
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCHH
ITWVLAILTLAIVWGGYRYTETKHPYTVPIQAGQSKVAPLPVAPNPVAIKITDANYDVPG
HHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCC
RALRVSMEVTNNGDTPVTFGEFTTAGIRFVNSTGRKYLDPQYPRELVAVGLNFDDDGAIQ
CEEEEEEEEECCCCCCEEECCCCEEHEEEEECCCCCCCCCCCCHHHEEEECCCCCCCCCC
PGETKQLRMEAKDALWEIQRLMALLGDPESRFGGLLMSWDSEGNRHINSIAGPVIPVFTK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCCHHHHCCCHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12700255; 8468301; 7980540 [H]