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The map label for this gene is ylpA [H]

Identifier: 114331932

GI number: 114331932

Start: 2073785

End: 2074558

Strand: Direct

Name: ylpA [H]

Synonym: Neut_1959

Alternate gene names: 114331932

Gene position: 2073785-2074558 (Clockwise)

Preceding gene: 114331931

Following gene: 114331933

Centisome position: 77.93

GC content: 51.03

Gene sequence:

>774_bases
ATGGATTATTCCATCAGTAAACCAGCCCGGGCTCTGGCCGGGATCATAGTTCTCTCTTTGACATTGGGTGGTTGTGCTGC
AGTTCATACATCCATTGCAAAAAAGGATTTGGATGTGCAAACCAAGATGAGTGACACTATTTTTCTGGATCCAGTTGAGC
CAGGGCAAAAAGTTGTCTACCTGAACATTCGCAATGCTTCTGACAAAACCAATTTCGATATTTCCCCGTCTGTCATCAAT
TCATTACAAAGCAAAGGTTACCGCATTACAGAAAACCCGAAAGCGGCGCATTACTGGTTGCAAGTCAACGTGCTAAGCGT
TGAGAAAGCCAGCCCGACCGCAGCCGAATCCGCTTTGAGAGCGGGTTATGGTGGGCTGGGCAGTGCAGCAATGGGCGCTG
CAGTAGGCTCGGCAACTGGCGCAGCTATTAGTGGCTGGAGCGGCGCCGGGATTGGTGGGCTCGCCGGCGCGGCAGCATTT
GGCCTGGTGGATACCATCGCCGGGGCTGCAGTAAAAGACGTTACCTTTATGGCCATCACCGATATTGAGATCGCTGAGCG
TGCTGAAGATGGCGTCATCGTACGCGAAGATCGTCAACAGGATCTGAAACAGGGGGTTGGAGGTTCTAAAAGACAGACTT
CTTCCAAAGTCAGCGAAATGAACAAGTATCGCACCCGCGTCGTCAGCATCGCCAACAAGGCCAATCTTGAATATGAAGAA
GCCGCACCTGAATTAACGAATGGCCTGGCACGCACTATTTCCGGATTATTCTGA

Upstream 100 bases:

>100_bases
ATGCAAGCGGCAATCACATATCTCAGCTATATAAAAACAGTTTATTCGTTTGATCTTTAATTTTTCACACAAATACTAAA
ACTAAATACCAGGAGGTGAA

Downstream 100 bases:

>100_bases
CATTCTGCCTGCCACCTGGCACAACATCTGGGGGCGACTCATCAAAGGAGATCCACAATGACCATAGACACCATGATCAT
CACGCTGACTTCAGTGGCTT

Product: TraT complement resistance family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDYSISKPARALAGIIVLSLTLGGCAAVHTSIAKKDLDVQTKMSDTIFLDPVEPGQKVVYLNIRNASDKTNFDISPSVIN
SLQSKGYRITENPKAAHYWLQVNVLSVEKASPTAAESALRAGYGGLGSAAMGAAVGSATGAAISGWSGAGIGGLAGAAAF
GLVDTIAGAAVKDVTFMAITDIEIAERAEDGVIVREDRQQDLKQGVGGSKRQTSSKVSEMNKYRTRVVSIANKANLEYEE
AAPELTNGLARTISGLF

Sequences:

>Translated_257_residues
MDYSISKPARALAGIIVLSLTLGGCAAVHTSIAKKDLDVQTKMSDTIFLDPVEPGQKVVYLNIRNASDKTNFDISPSVIN
SLQSKGYRITENPKAAHYWLQVNVLSVEKASPTAAESALRAGYGGLGSAAMGAAVGSATGAAISGWSGAGIGGLAGAAAF
GLVDTIAGAAVKDVTFMAITDIEIAERAEDGVIVREDRQQDLKQGVGGSKRQTSSKVSEMNKYRTRVVSIANKANLEYEE
AAPELTNGLARTISGLF
>Mature_257_residues
MDYSISKPARALAGIIVLSLTLGGCAAVHTSIAKKDLDVQTKMSDTIFLDPVEPGQKVVYLNIRNASDKTNFDISPSVIN
SLQSKGYRITENPKAAHYWLQVNVLSVEKASPTAAESALRAGYGGLGSAAMGAAVGSATGAAISGWSGAGIGGLAGAAAF
GLVDTIAGAAVKDVTFMAITDIEIAERAEDGVIVREDRQQDLKQGVGGSKRQTSSKVSEMNKYRTRVVSIANKANLEYEE
AAPELTNGLARTISGLF

Specific function: May function as a virulence determinant [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008874 [H]

Pfam domain/function: PF05818 TraT [H]

EC number: NA

Molecular weight: Translated: 26766; Mature: 26766

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYSISKPARALAGIIVLSLTLGGCAAVHTSIAKKDLDVQTKMSDTIFLDPVEPGQKVVY
CCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCEEEE
LNIRNASDKTNFDISPSVINSLQSKGYRITENPKAAHYWLQVNVLSVEKASPTAAESALR
EEEECCCCCCCCCCCHHHHHHHHHCCEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHH
AGYGGLGSAAMGAAVGSATGAAISGWSGAGIGGLAGAAAFGLVDTIAGAAVKDVTFMAIT
HCCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
DIEIAERAEDGVIVREDRQQDLKQGVGGSKRQTSSKVSEMNKYRTRVVSIANKANLEYEE
CHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AAPELTNGLARTISGLF
HCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDYSISKPARALAGIIVLSLTLGGCAAVHTSIAKKDLDVQTKMSDTIFLDPVEPGQKVVY
CCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCEEEE
LNIRNASDKTNFDISPSVINSLQSKGYRITENPKAAHYWLQVNVLSVEKASPTAAESALR
EEEECCCCCCCCCCCHHHHHHHHHCCEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHH
AGYGGLGSAAMGAAVGSATGAAISGWSGAGIGGLAGAAAFGLVDTIAGAAVKDVTFMAIT
HCCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
DIEIAERAEDGVIVREDRQQDLKQGVGGSKRQTSSKVSEMNKYRTRVVSIANKANLEYEE
CHHHHHHCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AAPELTNGLARTISGLF
HCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2287280 [H]