| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
Click here to switch to the map view.
The map label for this gene is fur [H]
Identifier: 114331912
GI number: 114331912
Start: 2051772
End: 2052221
Strand: Reverse
Name: fur [H]
Synonym: Neut_1938
Alternate gene names: 114331912
Gene position: 2052221-2051772 (Counterclockwise)
Preceding gene: 114331915
Following gene: 114331911
Centisome position: 77.12
GC content: 43.56
Gene sequence:
>450_bases ATGAGTAAATCAGAAAATTTGAAAAGTATAGATCTTAAGACGATGGGATTGAAGACAACACTCCCGCGTTTGAAGATATT AAATTTGTTTGAGAACAGCTCGATTCGGCATCTCTCGGCAGAAGACGTCTATAAAGAATTGCTAGGTGAGGGAGAGGATA TCGGTCTGGCAACGGTTTATCGTGTTCTGACTCAGTTTGAGCAAGCCGGATTGCTTGAGCGTCACCATTTTGAAAGTGGT AAGGCAGTTTTTGAGCTAGCCAGTGGTAATCATCATGACCACCTGGTATGCCTGCAATGTGGTCACGTTGAGGAATTCTT CGATCCAGAAATCGAAAAGCGTCAGGTGAAAATTGCCAAGGAGCGGGGGTTTGTGTTGCAGGATCATTCTTTGTCATTGT ATGCGGATTGCATAAAAAAAGACTGCCCAGACCGCATACGTAGTAAATAG
Upstream 100 bases:
>100_bases CGCGTCAGGGAATTAGTCCTGACTAAAAAGAAATTATTATGAAGGTTTACGCTTTTCAATTGTCTCATAAATGCAGTAAT TTCTTGAGGTAAATAACTTA
Downstream 100 bases:
>100_bases ACAGCAACGCTGCTTGATGTATTCCTGAATCTGTAAACCAATGTAACGGGTAATCGCTCGCTGATCGTTGACATGCAACC GACGACAAAAAACATTCGTA
Product: ferric uptake regulator, Fur family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSKSENLKSIDLKTMGLKTTLPRLKILNLFENSSIRHLSAEDVYKELLGEGEDIGLATVYRVLTQFEQAGLLERHHFESG KAVFELASGNHHDHLVCLQCGHVEEFFDPEIEKRQVKIAKERGFVLQDHSLSLYADCIKKDCPDRIRSK
Sequences:
>Translated_149_residues MSKSENLKSIDLKTMGLKTTLPRLKILNLFENSSIRHLSAEDVYKELLGEGEDIGLATVYRVLTQFEQAGLLERHHFESG KAVFELASGNHHDHLVCLQCGHVEEFFDPEIEKRQVKIAKERGFVLQDHSLSLYADCIKKDCPDRIRSK >Mature_148_residues SKSENLKSIDLKTMGLKTTLPRLKILNLFENSSIRHLSAEDVYKELLGEGEDIGLATVYRVLTQFEQAGLLERHHFESGK AVFELASGNHHDHLVCLQCGHVEEFFDPEIEKRQVKIAKERGFVLQDHSLSLYADCIKKDCPDRIRSK
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=58.0152671755725, Blast_Score=156, Evalue=6e-40,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17023; Mature: 16892
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSENLKSIDLKTMGLKTTLPRLKILNLFENSSIRHLSAEDVYKELLGEGEDIGLATVY CCCCCCCCCCCEECCCCHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHH RVLTQFEQAGLLERHHFESGKAVFELASGNHHDHLVCLQCGHVEEFFDPEIEKRQVKIAK HHHHHHHHCCHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCHHHHCCCHHHHHHHHHH ERGFVLQDHSLSLYADCIKKDCPDRIRSK HCCEEEECCCHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure SKSENLKSIDLKTMGLKTTLPRLKILNLFENSSIRHLSAEDVYKELLGEGEDIGLATVY CCCCCCCCCCEECCCCHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHH RVLTQFEQAGLLERHHFESGKAVFELASGNHHDHLVCLQCGHVEEFFDPEIEKRQVKIAK HHHHHHHHCCHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCHHHHCCCHHHHHHHHHH ERGFVLQDHSLSLYADCIKKDCPDRIRSK HCCEEEECCCHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA