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The map label for this gene is dcd

Identifier: 114331898

GI number: 114331898

Start: 2036360

End: 2036926

Strand: Direct

Name: dcd

Synonym: Neut_1923

Alternate gene names: 114331898

Gene position: 2036360-2036926 (Clockwise)

Preceding gene: 114331897

Following gene: 114331901

Centisome position: 76.52

GC content: 47.8

Gene sequence:

>567_bases
ATGTCGATCAAATCAGATAAATGGATCCGCAGGATGGCCGCCGAATACGGCATGATTGAGCCATTCGAGCCTGGTCAGGT
TAAACAGAAAGATGGGCACAGCATCGTCTCCTACGGTACTTCCAGCTATGGTTACGACATCCGCTGTTCGGATGAATTCA
AGCTGTTCACCAACCTGAATTCAACCATCGTTGACCCGAAACGTTTCGATTCAAACTCGTTTGTTGATTTAAAAAATGAT
ATCTGCATCATCCCGCCCAATTCCTTCGCGCTGGCACGCACAGTTGAATATTTCCGCATCCCGCGCAATGTGCTGACCAT
CTGCCTCGGGAAATCCACTTATGCTCGCTGTGGCATCATAGTCAATGTCACACCATTTGAGCCAGAGTGGGAGGGTTACG
TCACACTGGAGTTCTCCAACACGACCCCCCTGCCTGCCAAGATTTATGCCAATGAAGGCGTTGCCCAGGTTATCTTTTTT
GAAGCGGATGAAGTATGTGAAACATCCTACAAGGATCGCAAGGGTAAATACCAGTTTCAACAAGGAGTGACGTTGCCAAA
AATATAG

Upstream 100 bases:

>100_bases
GATTGCACGCCGCGTAGCAGCGAAAATCTCCGATATGGCGCGTGATTACACGGATGTATTTACACAAATTATCATGGAAG
ACGATTAATCAAGGCCGCGC

Downstream 100 bases:

>100_bases
ATTTGAGAAATACCAAAAGGTATTTCTTACCAGCTCCTCTTGCCCCACTTCTGATACTTCATAACAAGAAACAGAGCCAA
CTACCCACTATTCGGTTTTT

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSIKSDKWIRRMAAEYGMIEPFEPGQVKQKDGHSIVSYGTSSYGYDIRCSDEFKLFTNLNSTIVDPKRFDSNSFVDLKND
ICIIPPNSFALARTVEYFRIPRNVLTICLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVIFF
EADEVCETSYKDRKGKYQFQQGVTLPKI

Sequences:

>Translated_188_residues
MSIKSDKWIRRMAAEYGMIEPFEPGQVKQKDGHSIVSYGTSSYGYDIRCSDEFKLFTNLNSTIVDPKRFDSNSFVDLKND
ICIIPPNSFALARTVEYFRIPRNVLTICLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVIFF
EADEVCETSYKDRKGKYQFQQGVTLPKI
>Mature_187_residues
SIKSDKWIRRMAAEYGMIEPFEPGQVKQKDGHSIVSYGTSSYGYDIRCSDEFKLFTNLNSTIVDPKRFDSNSFVDLKNDI
CIIPPNSFALARTVEYFRIPRNVLTICLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVIFFE
ADEVCETSYKDRKGKYQFQQGVTLPKI

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_NITEC (Q0AES7)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_748120.1
- ProteinModelPortal:   Q0AES7
- SMR:   Q0AES7
- STRING:   Q0AES7
- GeneID:   4273345
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_1923
- NMPDR:   fig|335283.3.peg.1047
- eggNOG:   COG0717
- HOGENOM:   HBG553199
- OMA:   MEYFRIP
- PhylomeDB:   Q0AES7
- ProtClustDB:   PRK00416
- BioCyc:   NEUT335283:NEUT_1923-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 21418; Mature: 21286

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKSDKWIRRMAAEYGMIEPFEPGQVKQKDGHSIVSYGTSSYGYDIRCSDEFKLFTNLN
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECCC
STIVDPKRFDSNSFVDLKNDICIIPPNSFALARTVEYFRIPRNVLTICLGKSTYARCGII
CEECCCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHCCHHHEEEEECCCCCCCCEEE
VNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVIFFEADEVCETSYKDRKGKYQFQ
EEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCHHHHHHCCCCCCCCEEHH
QGVTLPKI
CCCCCCCC
>Mature Secondary Structure 
SIKSDKWIRRMAAEYGMIEPFEPGQVKQKDGHSIVSYGTSSYGYDIRCSDEFKLFTNLN
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECCC
STIVDPKRFDSNSFVDLKNDICIIPPNSFALARTVEYFRIPRNVLTICLGKSTYARCGII
CEECCCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHCCHHHEEEEECCCCCCCCEEE
VNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVIFFEADEVCETSYKDRKGKYQFQ
EEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCHHHHHHCCCCCCCCEEHH
QGVTLPKI
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA