Click here to switch to the map view.

The map label for this gene is 114331849

Identifier: 114331849

GI number: 114331849

Start: 1988827

End: 1989351

Strand: Direct

Name: 114331849

Synonym: Neut_1874

Alternate gene names: NA

Gene position: 1988827-1989351 (Clockwise)

Preceding gene: 114331848

Following gene: 114331850

Centisome position: 74.74

GC content: 41.71

Gene sequence:

>525_bases
ATGATCTCAACAGTTTACGCCATTACACTCGTAGGGATAGGCTTGGTCATGGCAGTCTTTTATTTTGTAATAATTAATTC
CAAAAAAACTGAAGCAGATTATCAATCCATTACAAAAAAATGGTACGACGTGCGCAGTAAATGGTTTATTTTTTTACTGA
TACTGGGAACCATCGTCACCTTCGCCTCACTGAATCCATTTCCAATTCCTGATCAACACAAGGAATATTCAAGCAATGAT
TACCAGATCGTCGCGGTAAATGGTCATCAATGGTACTGGACAATGACACCTGCCACCGTGAAATCAGGCCAGCCGGTTGA
ATTCCAGGTATCTGCCGCAGACGTGAATCACGGGTTCGGTATTTATGACGAAAACCTGGTATTGATTGCTCAGACCCAAG
CTATGCCAGGCTACACCAATAAACTTATTCACACATTTGACAAACCCGGAAAATTCAAGATTCTTTGCCTGGAATATTGC
GGCCTGGCGCATCATGTGATGATTACCGAATTGACAGTTGAATAA

Upstream 100 bases:

>100_bases
TGCTACAAGAATTTCTTGAAACATCAATAAGGGTTGACATAGATCTTTATCAAAGGTAAATTCGCGACCCGATTTTAATA
AACGGAAGGGGAAATATAAA

Downstream 100 bases:

>100_bases
ATAATTCTGCATTAACAATAACTTATTGGAGAATACAATGAGTACAACAGAAGTAAGCAGCAAGATTGAGTATTCCGATT
CAGAAAATCGGAATGCACTA

Product: cytochrome c oxidase, subunit II

Products: ferricytochrome c; H2O

Alternate protein names: B(O/A)3-Type Cytochrome C Oxidase Subunit II-Like Protein; Subunit II Of B(O/A)3-Type Cytochrome C Oxidase; Cytochrome-C Oxidase Subunit II; Cytochrome-C Oxidase Chain II; Cytochrome C Oxidase,Ba3-Type Subunit I

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MISTVYAITLVGIGLVMAVFYFVIINSKKTEADYQSITKKWYDVRSKWFIFLLILGTIVTFASLNPFPIPDQHKEYSSND
YQIVAVNGHQWYWTMTPATVKSGQPVEFQVSAADVNHGFGIYDENLVLIAQTQAMPGYTNKLIHTFDKPGKFKILCLEYC
GLAHHVMITELTVE

Sequences:

>Translated_174_residues
MISTVYAITLVGIGLVMAVFYFVIINSKKTEADYQSITKKWYDVRSKWFIFLLILGTIVTFASLNPFPIPDQHKEYSSND
YQIVAVNGHQWYWTMTPATVKSGQPVEFQVSAADVNHGFGIYDENLVLIAQTQAMPGYTNKLIHTFDKPGKFKILCLEYC
GLAHHVMITELTVE
>Mature_174_residues
MISTVYAITLVGIGLVMAVFYFVIINSKKTEADYQSITKKWYDVRSKWFIFLLILGTIVTFASLNPFPIPDQHKEYSSND
YQIVAVNGHQWYWTMTPATVKSGQPVEFQVSAADVNHGFGIYDENLVLIAQTQAMPGYTNKLIHTFDKPGKFKILCLEYC
GLAHHVMITELTVE

Specific function: Unknown

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 19750; Mature: 19750

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTVYAITLVGIGLVMAVFYFVIINSKKTEADYQSITKKWYDVRSKWFIFLLILGTIVT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FASLNPFPIPDQHKEYSSNDYQIVAVNGHQWYWTMTPATVKSGQPVEFQVSAADVNHGFG
HHCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEEEEECCCCCCC
IYDENLVLIAQTQAMPGYTNKLIHTFDKPGKFKILCLEYCGLAHHVMITELTVE
EECCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEHHCCCHHEEEEEEEEEC
>Mature Secondary Structure
MISTVYAITLVGIGLVMAVFYFVIINSKKTEADYQSITKKWYDVRSKWFIFLLILGTIVT
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FASLNPFPIPDQHKEYSSNDYQIVAVNGHQWYWTMTPATVKSGQPVEFQVSAADVNHGFG
HHCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEEEEECCCCCCC
IYDENLVLIAQTQAMPGYTNKLIHTFDKPGKFKILCLEYCGLAHHVMITELTVE
EECCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEHHCCCHHEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA