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The map label for this gene is 114331794

Identifier: 114331794

GI number: 114331794

Start: 1926472

End: 1927275

Strand: Reverse

Name: 114331794

Synonym: Neut_1818

Alternate gene names: NA

Gene position: 1927275-1926472 (Counterclockwise)

Preceding gene: 114331795

Following gene: 114331793

Centisome position: 72.43

GC content: 47.14

Gene sequence:

>804_bases
ATGGGCCCCAAAGAGTCGCACTCGACTGTTTTAAGTCTGGAAGAAGAAGCCGCTGTTGTGGCGTTTCGCAAACATACGCT
TCTACCGCTGGATGATTGTCTATATGCCTTGCAACCAAGCATTCCGCATTTAACCCGCTCAAGCCTGCATCGCTGCTTTC
AACGGCATGGCATCAGTCGGTTGCCGGAGGCTGATGGTGACAAGCCAAAGAAAAAGTTTAATGCCTATCCAATTGGCTAC
TTCCATATTGATATTGCCGAAGTTCGTACGAAGGAAGGTAAACTCTATCTTTTTGTAGCCATTGACCGGACATCAAAGTT
CGTTTTTGTTCAACTCCAGAACAAAGCCAACCGCAACACGGCAACCGCCTTCTTGAAGGCCGTGATCGAGACTGTTCCCT
ACAAGATCCATACAATCCTGACTGATAACGGTATCCAGTTTACGTTCCCGGCGCGTTATCGGAATGGGCCAACGGCTCAG
TATGTAACGCATATGTTCGATAGGTGTTGTCAGATCAACGACATCGAGCACCGTCTCACCAAACCCAACTGTCCCTGGAC
CAATGGTCAGGTTGAACGCATGAATCGAACCATCAAGGATGCGACTGTAAAACGGTATTATTACGACTCACACGATCAGT
TGAAGGCCCATCTCCATCGCTTTGTGATGGCTTATAACTTCGCCAAAAGACTAAAAGCTCTCAAGGGCCTAACACCCTAT
GAATACATCTGCAAAATCTGGAAAAATGAGCCAGATCGTTTTATCTTTGATCCATTCCAGCACACCGTGGGACTAAACAG
TTAG

Upstream 100 bases:

>100_bases
GATTCATCAAGAGAGTCTGAATGTTCTGGCCAAGCGGCATGGGATTAATCCAAAAACGGTAGCGAAGTGGCGGAAGCGGG
AATTCACCCACGATGCACCG

Downstream 100 bases:

>100_bases
TCCTGAGATGGCACTTCGGTTAGCGCGATTTTTTGGTAATTCGGCAGAATTTTGGATTAACGCACAAGGCGAGGTAGATC
TGTGGGATGCTGCGCGGACG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Integrase; Integrase Catalytic Domain-Containing Protein; Integrase Protein; Integrase Catalytic Core; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Hypothethical Protein Transposase; Instegrase; Transposase Of

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIGY
FHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNTATAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQ
YVTHMFDRCCQINDIEHRLTKPNCPWTNGQVERMNRTIKDATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPY
EYICKIWKNEPDRFIFDPFQHTVGLNS

Sequences:

>Translated_267_residues
MGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIGY
FHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNTATAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQ
YVTHMFDRCCQINDIEHRLTKPNCPWTNGQVERMNRTIKDATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPY
EYICKIWKNEPDRFIFDPFQHTVGLNS
>Mature_266_residues
GPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSIPHLTRSSLHRCFQRHGISRLPEADGDKPKKKFNAYPIGYF
HIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNTATAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQY
VTHMFDRCCQINDIEHRLTKPNCPWTNGQVERMNRTIKDATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYE
YICKIWKNEPDRFIFDPFQHTVGLNS

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31079; Mature: 30948

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSIPHLTRSSLHRCFQRHGISR
CCCCCCCCEEEEEHHHHHEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
LPEADGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNT
CCCCCCCCCHHHCCCCCEEEEEEEHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCHH
ATAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINDIEHRLT
HHHHHHHHHHHCCEEEEEEEECCCEEEEECHHHCCCCHHHHHHHHHHHHCCCCCHHHHCC
KPNCPWTNGQVERMNRTIKDATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPY
CCCCCCCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EYICKIWKNEPDRFIFDPFQHTVGLNS
HHHHHHHCCCCCCEEECCHHHHCCCCC
>Mature Secondary Structure 
GPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSIPHLTRSSLHRCFQRHGISR
CCCCCCCEEEEEHHHHHEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
LPEADGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLYLFVAIDRTSKFVFVQLQNKANRNT
CCCCCCCCCHHHCCCCCEEEEEEEHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCHH
ATAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPTAQYVTHMFDRCCQINDIEHRLT
HHHHHHHHHHHCCEEEEEEEECCCEEEEECHHHCCCCHHHHHHHHHHHHCCCCCHHHHCC
KPNCPWTNGQVERMNRTIKDATVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPY
CCCCCCCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EYICKIWKNEPDRFIFDPFQHTVGLNS
HHHHHHHCCCCCCEEECCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA