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The map label for this gene is yccA [H]

Identifier: 114331697

GI number: 114331697

Start: 1815144

End: 1815815

Strand: Reverse

Name: yccA [H]

Synonym: Neut_1715

Alternate gene names: 114331697

Gene position: 1815815-1815144 (Counterclockwise)

Preceding gene: 114331698

Following gene: 114331696

Centisome position: 68.24

GC content: 37.5

Gene sequence:

>672_bases
ATGAATCGAAGCTATTCAACAGTTGCTCATAGCGCATCATCTGCTTTAACGACTAACAAGGTATTGCGTAACACTTACAT
GCTGTTATCGTTAACGCTATTGTTCAGCAGTCTAACTGCAGGGCTTTCAATGTTCTTAAATATGCCACCGATGACATATT
TAATTTCTGTGATAGGTGCCATGCTGATTGCAATGTTTGTATTACCTCGTTTTGCCCAATCTGTAGCAGGAATCGGAATT
GTTTTTCTGATTACAGGTTTATTGGGATTTGGATTAGGTCCCATGTTAACCATGTATGCTTCTCTGCCTAATGGTGGCGA
TATCATTACATTGTCACTAGCGGGCACGGGCACGATATTTATAGGATTATCTGCCTATGCTCTTTTCACACGAAAAGATT
TTAGTTTCCTGGGTGGGTTTTTGATGGTAGGTTTTTTGTTAGTTTTACTTGCTGCTCTGGCAAATATTTTCTTACAAATA
CCTGCAATGTCATTAGCGATATCAACTGTAGTTATTCTCATCATGAGTGGTTTCATTTTATATGACACGAGTCGTATTAT
TCATGGTGGCGAAACTAATTATGTGTTAGCAACAATCGGGTTATATATGACCATTTTCAATATCTTTATCAGCTTGATGC
AAATTTTAGGGATTATGGGTAATGATGATTAG

Upstream 100 bases:

>100_bases
ATACTTACAAGATGAACTATAAATAAGGCATCTGGGTCAATATAGCCTGCTATAACAAAAACAGCAGTAATTTGTATACT
TATATTTGGAGATCATTAAA

Downstream 100 bases:

>100_bases
TTGTCAGCTACTTTAGCTAAACAAAGCCCCGGTCAAGCCGGGGCTTTGTTTTTAGAGTGGAATAAGTGGAAGGAACAGAG
GTTTGGGTATGGATTGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNRSYSTVAHSASSALTTNKVLRNTYMLLSLTLLFSSLTAGLSMFLNMPPMTYLISVIGAMLIAMFVLPRFAQSVAGIGI
VFLITGLLGFGLGPMLTMYASLPNGGDIITLSLAGTGTIFIGLSAYALFTRKDFSFLGGFLMVGFLLVLLAALANIFLQI
PAMSLAISTVVILIMSGFILYDTSRIIHGGETNYVLATIGLYMTIFNIFISLMQILGIMGNDD

Sequences:

>Translated_223_residues
MNRSYSTVAHSASSALTTNKVLRNTYMLLSLTLLFSSLTAGLSMFLNMPPMTYLISVIGAMLIAMFVLPRFAQSVAGIGI
VFLITGLLGFGLGPMLTMYASLPNGGDIITLSLAGTGTIFIGLSAYALFTRKDFSFLGGFLMVGFLLVLLAALANIFLQI
PAMSLAISTVVILIMSGFILYDTSRIIHGGETNYVLATIGLYMTIFNIFISLMQILGIMGNDD
>Mature_223_residues
MNRSYSTVAHSASSALTTNKVLRNTYMLLSLTLLFSSLTAGLSMFLNMPPMTYLISVIGAMLIAMFVLPRFAQSVAGIGI
VFLITGLLGFGLGPMLTMYASLPNGGDIITLSLAGTGTIFIGLSAYALFTRKDFSFLGGFLMVGFLLVLLAALANIFLQI
PAMSLAISTVVILIMSGFILYDTSRIIHGGETNYVLATIGLYMTIFNIFISLMQILGIMGNDD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=210, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=3e-11,
Organism=Escherichia coli, GI1787205, Length=222, Percent_Identity=51.3513513513513, Blast_Score=194, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 23859; Mature: 23859

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSYSTVAHSASSALTTNKVLRNTYMLLSLTLLFSSLTAGLSMFLNMPPMTYLISVIGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
MLIAMFVLPRFAQSVAGIGIVFLITGLLGFGLGPMLTMYASLPNGGDIITLSLAGTGTIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEECCCCEEE
IGLSAYALFTRKDFSFLGGFLMVGFLLVLLAALANIFLQIPAMSLAISTVVILIMSGFIL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
YDTSRIIHGGETNYVLATIGLYMTIFNIFISLMQILGIMGNDD
EECHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNRSYSTVAHSASSALTTNKVLRNTYMLLSLTLLFSSLTAGLSMFLNMPPMTYLISVIGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
MLIAMFVLPRFAQSVAGIGIVFLITGLLGFGLGPMLTMYASLPNGGDIITLSLAGTGTIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEECCCCEEE
IGLSAYALFTRKDFSFLGGFLMVGFLLVLLAALANIFLQIPAMSLAISTVVILIMSGFIL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
YDTSRIIHGGETNYVLATIGLYMTIFNIFISLMQILGIMGNDD
EECHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]