Click here to switch to the map view.

The map label for this gene is yeaW [H]

Identifier: 114331664

GI number: 114331664

Start: 1773055

End: 1774161

Strand: Reverse

Name: yeaW [H]

Synonym: Neut_1680

Alternate gene names: 114331664

Gene position: 1774161-1773055 (Counterclockwise)

Preceding gene: 114331667

Following gene: 114331663

Centisome position: 66.67

GC content: 45.98

Gene sequence:

>1107_bases
ATGTCTGGCTTTGTACATACTTCTGATATTGCTGTTGCGCATCCACAACTTTCTGTTGACTGGTATCTGGATCCACGGAT
ATTCGAGCTGGAAAAACAGCTGTTATTTGATCAGGGACCGGGCTATGTTGGACATGAACTGATGGTGCCGGAAACAGGTG
ACTATTACGTGCTGGCTGCGCAGAATAATGCCAAGGTTCTGGTTCGTAATGAAAACGGGATCGAACTACTATCGAATATC
TGTCGGCATCGCCAGGCAATTATTCTGGAGGGGCGTGGTAGTTCCCGCAATATAGTCTGTCCGATTCATCGTTGGACTTA
TGCAATGGATGGTAAATTGCTGGGCGCACCACATTTCAGCAAAAATCCATGCCTAAATCTGGGTAAAACAGCCTTACAGC
ACTGGAACGGGCTGATTTTCGCTGGCAAGCGTGATGTGAATCAGGATGTTGCCGGAATGAAGGTTCGTGATAAATTGGAT
TTTTCAAAGTATGCACTGGATCGTGTGCAAATTGAACACTACCAGTGCAACTGGAAAACTTTTATTGAGGTTTATCTGGA
AGATTATCACGTCGATCCTTTTCATCCGGGTCTGGGTCATTTCGTGGACACCAGTCAGCTTGAATGGGAATTTAGTGACT
GGTACAGCGTCCAGACTGTCGGCGTAAACCGTGATTTTAATCGAGCGGGCTCAGAGATATATCAGGAATGGCATACGCAG
GTGTTGCAGCATAATAATCAACAAGTGCCGCGACATGGTGCGATTTGGCTGCTTTATTATCCTAATGTCATGGTTGAATG
GTACCCCGATACCCTTGTTGTCAGTACCATTTTGCCAACCGGAATAGAGCAATGCATGAATGTGGTTGAATTTTATTACC
CTGAAGAAATCATCCTGTTTGAGCGAGAATTTGTGGAGAGGGAGCAGGCTGCCTATCAGGAGACCGCCAGGGAAGATGAT
GAAATATGTAAACGGATTACGGCTGGCCGGCGTGCATTGTATCAGCAGGGAATAAATGAAACAGGTCCATACCAGATGCC
AATGGAAGCAGGGATGGAACATTTTCATCATTTCCTCCGGCGAGAACTAGAACAGCATCTACCCTAA

Upstream 100 bases:

>100_bases
GATCATATTCGCTGCTAAGGTACCCTGTTACTATCAATCGGGTTCTTTTTTGATTGGATTGAGGGTTTATTCTCTGATTG
CAGGGTGATACTGAAAATAT

Downstream 100 bases:

>100_bases
ATCTGGATCTTACAGCCAGAATGTCCTCATTATGGATGCTAGTGGCGGGATTCATGTTCGCCTGCATGGGGGAGCTGGTA
AAACTTGCTGCTGCATTTTT

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSGFVHTSDIAVAHPQLSVDWYLDPRIFELEKQLLFDQGPGYVGHELMVPETGDYYVLAAQNNAKVLVRNENGIELLSNI
CRHRQAIILEGRGSSRNIVCPIHRWTYAMDGKLLGAPHFSKNPCLNLGKTALQHWNGLIFAGKRDVNQDVAGMKVRDKLD
FSKYALDRVQIEHYQCNWKTFIEVYLEDYHVDPFHPGLGHFVDTSQLEWEFSDWYSVQTVGVNRDFNRAGSEIYQEWHTQ
VLQHNNQQVPRHGAIWLLYYPNVMVEWYPDTLVVSTILPTGIEQCMNVVEFYYPEEIILFEREFVEREQAAYQETAREDD
EICKRITAGRRALYQQGINETGPYQMPMEAGMEHFHHFLRRELEQHLP

Sequences:

>Translated_368_residues
MSGFVHTSDIAVAHPQLSVDWYLDPRIFELEKQLLFDQGPGYVGHELMVPETGDYYVLAAQNNAKVLVRNENGIELLSNI
CRHRQAIILEGRGSSRNIVCPIHRWTYAMDGKLLGAPHFSKNPCLNLGKTALQHWNGLIFAGKRDVNQDVAGMKVRDKLD
FSKYALDRVQIEHYQCNWKTFIEVYLEDYHVDPFHPGLGHFVDTSQLEWEFSDWYSVQTVGVNRDFNRAGSEIYQEWHTQ
VLQHNNQQVPRHGAIWLLYYPNVMVEWYPDTLVVSTILPTGIEQCMNVVEFYYPEEIILFEREFVEREQAAYQETAREDD
EICKRITAGRRALYQQGINETGPYQMPMEAGMEHFHHFLRRELEQHLP
>Mature_367_residues
SGFVHTSDIAVAHPQLSVDWYLDPRIFELEKQLLFDQGPGYVGHELMVPETGDYYVLAAQNNAKVLVRNENGIELLSNIC
RHRQAIILEGRGSSRNIVCPIHRWTYAMDGKLLGAPHFSKNPCLNLGKTALQHWNGLIFAGKRDVNQDVAGMKVRDKLDF
SKYALDRVQIEHYQCNWKTFIEVYLEDYHVDPFHPGLGHFVDTSQLEWEFSDWYSVQTVGVNRDFNRAGSEIYQEWHTQV
LQHNNQQVPRHGAIWLLYYPNVMVEWYPDTLVVSTILPTGIEQCMNVVEFYYPEEIILFEREFVEREQAAYQETAREDDE
ICKRITAGRRALYQQGINETGPYQMPMEAGMEHFHHFLRRELEQHLP

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=215, Percent_Identity=27.4418604651163, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788888, Length=195, Percent_Identity=30.2564102564103, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 42947; Mature: 42816

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFVHTSDIAVAHPQLSVDWYLDPRIFELEKQLLFDQGPGYVGHELMVPETGDYYVLAA
CCCCEECCCEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEE
QNNAKVLVRNENGIELLSNICRHRQAIILEGRGSSRNIVCPIHRWTYAMDGKLLGAPHFS
CCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEHHHEEEEECCEEECCCCCC
KNPCLNLGKTALQHWNGLIFAGKRDVNQDVAGMKVRDKLDFSKYALDRVQIEHYQCNWKT
CCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHEEEEEEECCHHH
FIEVYLEDYHVDPFHPGLGHFVDTSQLEWEFSDWYSVQTVGVNRDFNRAGSEIYQEWHTQ
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHH
VLQHNNQQVPRHGAIWLLYYPNVMVEWYPDTLVVSTILPTGIEQCMNVVEFYYPEEIILF
HHHCCCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
EREFVEREQAAYQETAREDDEICKRITAGRRALYQQGINETGPYQMPMEAGMEHFHHFLR
EHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
RELEQHLP
HHHHHHCC
>Mature Secondary Structure 
SGFVHTSDIAVAHPQLSVDWYLDPRIFELEKQLLFDQGPGYVGHELMVPETGDYYVLAA
CCCEECCCEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEE
QNNAKVLVRNENGIELLSNICRHRQAIILEGRGSSRNIVCPIHRWTYAMDGKLLGAPHFS
CCCCEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEHHHEEEEECCEEECCCCCC
KNPCLNLGKTALQHWNGLIFAGKRDVNQDVAGMKVRDKLDFSKYALDRVQIEHYQCNWKT
CCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHEEEEEEECCHHH
FIEVYLEDYHVDPFHPGLGHFVDTSQLEWEFSDWYSVQTVGVNRDFNRAGSEIYQEWHTQ
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHH
VLQHNNQQVPRHGAIWLLYYPNVMVEWYPDTLVVSTILPTGIEQCMNVVEFYYPEEIILF
HHHCCCCCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
EREFVEREQAAYQETAREDDEICKRITAGRRALYQQGINETGPYQMPMEAGMEHFHHFLR
EHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
RELEQHLP
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]