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The map label for this gene is tolB [H]

Identifier: 114331371

GI number: 114331371

Start: 1450172

End: 1451281

Strand: Direct

Name: tolB [H]

Synonym: Neut_1380

Alternate gene names: 114331371

Gene position: 1450172-1451281 (Clockwise)

Preceding gene: 114331368

Following gene: 114331374

Centisome position: 54.5

GC content: 46.04

Gene sequence:

>1110_bases
ATGAAAAATTTTACACAGCCAATCAACCTTTCCGGTGGCCTGCCATTTGCTCGTAATTTACTGGCAACCGCCTGTTTTCT
TGTTATGGCTCAGGCAGGAGCAGCCGGTTTCATTACCGATGCCAAACAAGTTTCGGGGCAGGAAGTCAGGTCAGGTGAAG
GGTATTACCGTGCTGATGGTAACTGGCTGGTTTATCAGGCAGAAGTTGCTGGTGAGAATCCTTTTTACCAGATTTATCTG
AAAAATCTTGCCAACGAGAATGTGCAGCAGATTTCACCTGGTATTGGCAAAACCACTTGTTCGTGGGTACATCCTTCCCA
GGAGAAGGTGTTGTTTTCTTCAACCCATGACGATCCCGAAGCAAAAGCCAAGATGGTTGCTGAGATTGAGCAAAGAAAAT
CTGGCCAACGCAGGGCGTATGCCTGGGATTATGACGAATTCTATGATATCTATGAAGCCGATTTTGAAGGTAAAAATATC
AAAAATCTCACCAATACCAAAGGATATGATGCAGAGGCTTCCTGGTCGCCAGATGGCAAGCTGATTGCATTTGCCTCCAA
CCGCCGGGCTTACAGCGAGCCGCTTACCGAAGAAGAAACTGCACTGTTCAACAATAACCCTTCTTCCCTAATCGATATTT
ACATCATGGATGCAGATGGTTCCAATGTAAAAAGACTGACGCATACCAACCGCTATGACGGTGGCCCGTTCTTCAGTCCG
GATGGAAAAAGGATCGTCTGGCGTCGTTTCTCGGAAAATGGGCAAGAAGCAGAAATATTCACCATGAATATTGATGGATC
GGATCAAAAGCAACTTACCCGGCTCAATAAAATGTCCTGGGCACCTTTTTACCACCCATCCAATCAGTACATTATTTTCG
CAGCCAACGTTGAGGGGCACCGGAATTTTGAGCTCTACGTCGTTGATGTTGACAGCAAGAAAGAGCCCGTACGAGTAACA
GAGGAAGAAGGATTTGATGGTCTACCGGTATTTACACCGGATGGCCAGTACATCACCTGGACCAGCGATCGCACACCTGA
TAAAAAAGGCCATCTTTTTCATGGCAAATGGAACCATGAAAAAGCACTGGAAAGTCTGGGGTTGAAATAA

Upstream 100 bases:

>100_bases
ATGATGCCCTTGTAACGGGTGGGTTCGCTTACCTTTGCTTATCTTTTTACGGGAACTATGCTTAAATGATTTTTATTTAC
TGACGAGGATTATGAACCAA

Downstream 100 bases:

>100_bases
ATAACTATTGGTTAAAATCAGTGGTTGTTTAGTCTGGCTGACAGTTGTAAAAAATAAAACTGTCAGCCAACGTCAACCCA
GCCCGGCTTCAGAACTCATT

Product: WD40 domain-containing protein

Products: NA

Alternate protein names: Adventurous gliding motility protein W [H]

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MKNFTQPINLSGGLPFARNLLATACFLVMAQAGAAGFITDAKQVSGQEVRSGEGYYRADGNWLVYQAEVAGENPFYQIYL
KNLANENVQQISPGIGKTTCSWVHPSQEKVLFSSTHDDPEAKAKMVAEIEQRKSGQRRAYAWDYDEFYDIYEADFEGKNI
KNLTNTKGYDAEASWSPDGKLIAFASNRRAYSEPLTEEETALFNNNPSSLIDIYIMDADGSNVKRLTHTNRYDGGPFFSP
DGKRIVWRRFSENGQEAEIFTMNIDGSDQKQLTRLNKMSWAPFYHPSNQYIIFAANVEGHRNFELYVVDVDSKKEPVRVT
EEEGFDGLPVFTPDGQYITWTSDRTPDKKGHLFHGKWNHEKALESLGLK

Sequences:

>Translated_369_residues
MKNFTQPINLSGGLPFARNLLATACFLVMAQAGAAGFITDAKQVSGQEVRSGEGYYRADGNWLVYQAEVAGENPFYQIYL
KNLANENVQQISPGIGKTTCSWVHPSQEKVLFSSTHDDPEAKAKMVAEIEQRKSGQRRAYAWDYDEFYDIYEADFEGKNI
KNLTNTKGYDAEASWSPDGKLIAFASNRRAYSEPLTEEETALFNNNPSSLIDIYIMDADGSNVKRLTHTNRYDGGPFFSP
DGKRIVWRRFSENGQEAEIFTMNIDGSDQKQLTRLNKMSWAPFYHPSNQYIIFAANVEGHRNFELYVVDVDSKKEPVRVT
EEEGFDGLPVFTPDGQYITWTSDRTPDKKGHLFHGKWNHEKALESLGLK
>Mature_369_residues
MKNFTQPINLSGGLPFARNLLATACFLVMAQAGAAGFITDAKQVSGQEVRSGEGYYRADGNWLVYQAEVAGENPFYQIYL
KNLANENVQQISPGIGKTTCSWVHPSQEKVLFSSTHDDPEAKAKMVAEIEQRKSGQRRAYAWDYDEFYDIYEADFEGKNI
KNLTNTKGYDAEASWSPDGKLIAFASNRRAYSEPLTEEETALFNNNPSSLIDIYIMDADGSNVKRLTHTNRYDGGPFFSP
DGKRIVWRRFSENGQEAEIFTMNIDGSDQKQLTRLNKMSWAPFYHPSNQYIIFAANVEGHRNFELYVVDVDSKKEPVRVT
EEEGFDGLPVFTPDGQYITWTSDRTPDKKGHLFHGKWNHEKALESLGLK

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

Organism=Caenorhabditis elegans, GI32564215, Length=348, Percent_Identity=29.8850574712644, Blast_Score=131, Evalue=7e-31,
Organism=Caenorhabditis elegans, GI32564217, Length=348, Percent_Identity=29.8850574712644, Blast_Score=130, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 41786; Mature: 41786

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFTQPINLSGGLPFARNLLATACFLVMAQAGAAGFITDAKQVSGQEVRSGEGYYRADG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCHHHCCCCEEEECC
NWLVYQAEVAGENPFYQIYLKNLANENVQQISPGIGKTTCSWVHPSQEKVLFSSTHDDPE
CEEEEEEEECCCCCEEEEEEEHHCCCCHHHHCCCCCCCEEEECCCCCCEEEEECCCCCHH
AKAKMVAEIEQRKSGQRRAYAWDYDEFYDIYEADFEGKNIKNLTNTKGYDAEASWSPDGK
HHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LIAFASNRRAYSEPLTEEETALFNNNPSSLIDIYIMDADGSNVKRLTHTNRYDGGPFFSP
EEEEECCCCHHCCCCCCCHHHEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCEECC
DGKRIVWRRFSENGQEAEIFTMNIDGSDQKQLTRLNKMSWAPFYHPSNQYIIFAANVEGH
CCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEECCCCCEEEEEECCCCC
RNFELYVVDVDSKKEPVRVTEEEGFDGLPVFTPDGQYITWTSDRTPDKKGHLFHGKWNHE
CCEEEEEEECCCCCCCEEEECCCCCCCCEEECCCCCEEEECCCCCCCCCCCEEECCCCHH
KALESLGLK
HHHHHHCCC
>Mature Secondary Structure
MKNFTQPINLSGGLPFARNLLATACFLVMAQAGAAGFITDAKQVSGQEVRSGEGYYRADG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCHHHCCCCEEEECC
NWLVYQAEVAGENPFYQIYLKNLANENVQQISPGIGKTTCSWVHPSQEKVLFSSTHDDPE
CEEEEEEEECCCCCEEEEEEEHHCCCCHHHHCCCCCCCEEEECCCCCCEEEEECCCCCHH
AKAKMVAEIEQRKSGQRRAYAWDYDEFYDIYEADFEGKNIKNLTNTKGYDAEASWSPDGK
HHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LIAFASNRRAYSEPLTEEETALFNNNPSSLIDIYIMDADGSNVKRLTHTNRYDGGPFFSP
EEEEECCCCHHCCCCCCCHHHEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCEECC
DGKRIVWRRFSENGQEAEIFTMNIDGSDQKQLTRLNKMSWAPFYHPSNQYIIFAANVEGH
CCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEECCCCCEEEEEECCCCC
RNFELYVVDVDSKKEPVRVTEEEGFDGLPVFTPDGQYITWTSDRTPDKKGHLFHGKWNHE
CCEEEEEEECCCCCCCEEEECCCCCCCCEEECCCCCEEEECCCCCCCCCCCEEECCCCHH
KALESLGLK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA