Click here to switch to the map view.

The map label for this gene is macB1 [H]

Identifier: 114331336

GI number: 114331336

Start: 1410025

End: 1411227

Strand: Direct

Name: macB1 [H]

Synonym: Neut_1343

Alternate gene names: 114331336

Gene position: 1410025-1411227 (Clockwise)

Preceding gene: 114331335

Following gene: 114331337

Centisome position: 52.99

GC content: 53.45

Gene sequence:

>1203_bases
ATGAGACTACAGGATCTCCTGCGTTTTTCCCTTAAAACTATTACCAGCTACCCTGCTCGCTCGTTTTTGATCATACTGGC
CATGGCATTGGGTGTGGCTGCAGTGATCATTCTGACTGCATTGGGCGATGGGGCGCGCCAGTATGTCGTCAATGAATTTT
CTTCGATCGGCACCAACCTGATTATTGTCCTGCCTGGTCGTTCCGAAACAGCAGGGAGTTTTCCAGGCGCAGTCATGGGC
CAGACGTCAAGAGATCTGACGCTGGATGATGCTCATTGGGTAGGAAGGCTGCCACAAGTCAGGCGTTACGCTCCCCTGAA
TGTCGGTGTGGCTGAACTTTCTGCTGCAGGCAAGCTGCGGGAAGTCACGCTGATGGGCACCACCGCGGATATTTTCCCAA
TCCGTCACATGAAGCTTTCACAGGGAAAATTTCTTTCAAGCGCGGATGAAAGCAGTGCCCAGATTGTATTGGGTGCCAAG
ATTGCACAGGAATTTTTCCCGGATGGAAATGTACTGGGGCAGCGCGTTCGCCTGAGTGATCGGCGTTTTCTGGTCACCGG
CGTGATGGCGGAACAAGGCGAATCCATGGGATACAACTCGGATGAACTGGTCATTATTCCTATCCAGCATGCCCAGACAT
TACTCAACACTAATTCGCTGTTCCGGTTGCTGATTGAAATCCGCCATCATGGCGAAATCGATAATGCCAGGGAAGCAATT
CGTCAAACGCTCATTCGACGTCATGACGGGGAAGATGATGTCACCGTAATCGCCCATGATGCTGTACTGGCTACATTTGA
ACGTATCCTGCGTGCATTGACACTGGGGGTTGCCGGTATCGCCGTCATCAGCCTTGCTGTTGCCGGCATTTTGGTGATGA
ATGTTATGCTGGTATCGGTCAGTCAGCGCACGGCAGAAATTGGGCTACTCAAGGCAATTGGCACGCCGGCTGCTGTCATT
CGCTATATTTTTCTGGCTGAAGCCGTCTGGCTATCCCTGGCGGGAGCCCTGGCCGGATTCATACTGGGACAGGCAGGCAG
CTGGGCACTACGTCTGGCATATCCGCTGTTGCCCGCCTGGCCACCACTCTGGGCCAATTTTGCCGGGGTAGGAGTCGCAG
TATTGGCTGGCGTTCTGGCGGGATTATTACCGGCAATCCGTGCGGCGAAACTGGATCCGGTTGATGCACTTGGCAAGCGA
TAA

Upstream 100 bases:

>100_bases
CAGGTACCACGCTTATCGTCGTAACGCATGATCGCGAACTGGCATTACGCGCCCGGCGCCGGGTTGCCATGCACGATGGT
CGGATCGAAACCGACGAACA

Downstream 100 bases:

>100_bases
AGTCGATGAATCTTGTTGAATCCCTGAGATTTGCACTCCGCGCATTAACCGCCCACCGAACGCGCACATTTCTGTCTGCA
TCCGGTATTGCCATCGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MRLQDLLRFSLKTITSYPARSFLIILAMALGVAAVIILTALGDGARQYVVNEFSSIGTNLIIVLPGRSETAGSFPGAVMG
QTSRDLTLDDAHWVGRLPQVRRYAPLNVGVAELSAAGKLREVTLMGTTADIFPIRHMKLSQGKFLSSADESSAQIVLGAK
IAQEFFPDGNVLGQRVRLSDRRFLVTGVMAEQGESMGYNSDELVIIPIQHAQTLLNTNSLFRLLIEIRHHGEIDNAREAI
RQTLIRRHDGEDDVTVIAHDAVLATFERILRALTLGVAGIAVISLAVAGILVMNVMLVSVSQRTAEIGLLKAIGTPAAVI
RYIFLAEAVWLSLAGALAGFILGQAGSWALRLAYPLLPAWPPLWANFAGVGVAVLAGVLAGLLPAIRAAKLDPVDALGKR

Sequences:

>Translated_400_residues
MRLQDLLRFSLKTITSYPARSFLIILAMALGVAAVIILTALGDGARQYVVNEFSSIGTNLIIVLPGRSETAGSFPGAVMG
QTSRDLTLDDAHWVGRLPQVRRYAPLNVGVAELSAAGKLREVTLMGTTADIFPIRHMKLSQGKFLSSADESSAQIVLGAK
IAQEFFPDGNVLGQRVRLSDRRFLVTGVMAEQGESMGYNSDELVIIPIQHAQTLLNTNSLFRLLIEIRHHGEIDNAREAI
RQTLIRRHDGEDDVTVIAHDAVLATFERILRALTLGVAGIAVISLAVAGILVMNVMLVSVSQRTAEIGLLKAIGTPAAVI
RYIFLAEAVWLSLAGALAGFILGQAGSWALRLAYPLLPAWPPLWANFAGVGVAVLAGVLAGLLPAIRAAKLDPVDALGKR
>Mature_400_residues
MRLQDLLRFSLKTITSYPARSFLIILAMALGVAAVIILTALGDGARQYVVNEFSSIGTNLIIVLPGRSETAGSFPGAVMG
QTSRDLTLDDAHWVGRLPQVRRYAPLNVGVAELSAAGKLREVTLMGTTADIFPIRHMKLSQGKFLSSADESSAQIVLGAK
IAQEFFPDGNVLGQRVRLSDRRFLVTGVMAEQGESMGYNSDELVIIPIQHAQTLLNTNSLFRLLIEIRHHGEIDNAREAI
RQTLIRRHDGEDDVTVIAHDAVLATFERILRALTLGVAGIAVISLAVAGILVMNVMLVSVSQRTAEIGLLKAIGTPAAVI
RYIFLAEAVWLSLAGALAGFILGQAGSWALRLAYPLLPAWPPLWANFAGVGVAVLAGVLAGLLPAIRAAKLDPVDALGKR

Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=407, Percent_Identity=29.7297297297297, Blast_Score=134, Evalue=8e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017911
- InterPro:   IPR003593
- InterPro:   IPR003838 [H]

Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 42846; Mature: 42846

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQDLLRFSLKTITSYPARSFLIILAMALGVAAVIILTALGDGARQYVVNEFSSIGTNL
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE
IIVLPGRSETAGSFPGAVMGQTSRDLTLDDAHWVGRLPQVRRYAPLNVGVAELSAAGKLR
EEEECCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCHHHHHHCCCEE
EVTLMGTTADIFPIRHMKLSQGKFLSSADESSAQIVLGAKIAQEFFPDGNVLGQRVRLSD
EEEEECCCHHHCCHHCEECCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHEECC
RRFLVTGVMAEQGESMGYNSDELVIIPIQHAQTLLNTNSLFRLLIEIRHHGEIDNAREAI
CEEEEEEHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RQTLIRRHDGEDDVTVIAHDAVLATFERILRALTLGVAGIAVISLAVAGILVMNVMLVSV
HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQRTAEIGLLKAIGTPAAVIRYIFLAEAVWLSLAGALAGFILGQAGSWALRLAYPLLPAW
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCC
PPLWANFAGVGVAVLAGVLAGLLPAIRAAKLDPVDALGKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC
>Mature Secondary Structure
MRLQDLLRFSLKTITSYPARSFLIILAMALGVAAVIILTALGDGARQYVVNEFSSIGTNL
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE
IIVLPGRSETAGSFPGAVMGQTSRDLTLDDAHWVGRLPQVRRYAPLNVGVAELSAAGKLR
EEEECCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCHHHHHHCCCEE
EVTLMGTTADIFPIRHMKLSQGKFLSSADESSAQIVLGAKIAQEFFPDGNVLGQRVRLSD
EEEEECCCHHHCCHHCEECCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHEECC
RRFLVTGVMAEQGESMGYNSDELVIIPIQHAQTLLNTNSLFRLLIEIRHHGEIDNAREAI
CEEEEEEHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
RQTLIRRHDGEDDVTVIAHDAVLATFERILRALTLGVAGIAVISLAVAGILVMNVMLVSV
HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQRTAEIGLLKAIGTPAAVIRYIFLAEAVWLSLAGALAGFILGQAGSWALRLAYPLLPAW
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCC
PPLWANFAGVGVAVLAGVLAGLLPAIRAAKLDPVDALGKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA