Click here to switch to the map view.

The map label for this gene is trkA [H]

Identifier: 114331130

GI number: 114331130

Start: 1171734

End: 1173182

Strand: Reverse

Name: trkA [H]

Synonym: Neut_1132

Alternate gene names: 114331130

Gene position: 1173182-1171734 (Counterclockwise)

Preceding gene: 114331131

Following gene: 114331129

Centisome position: 44.09

GC content: 49.34

Gene sequence:

>1449_bases
GTGAAAATCGTTATTCTGGGAGCAGGTCGAGTCGGATCAACCGTAGCTGAAAGTCTGGTCAGCGAATCTAATGATATAAC
CGTCGTCGATCAGGCAAGAAGCAGTCTCACGCCGCTGCAGGAGCGACTAGATTTACGCACGGTCATCGGCAGCGCCTCTC
ACCCTAACGTCATGATCCAGGCAGGCATGGAAGACGCCGACATGATGTTGGCACTTACCGGCAGTGATGAAACCAACCTG
GTTGCATGCAAGCTGGCCGCCAGCCTGTTTAATACACCCACCCGGATAGCCCGCATCCGGACCACCGATTATCTGGATCA
CCCGGATATATTCTCGAAGGAAAATTTTTGTGTCGATTTTGCAATTTGTCCGGAACGAATCCTGACCCAATACATAGAGA
AGCTGATCGAATTCCCGGGCGCATTACAAGTACTGGATTTTGCCTCTGGCAAAGTCAGCCTGGTCGCGGTAAAGGCTGTT
CGCGGAGGGCCGCTGATCGGGCGTCATCTGAAAGAACTACGCCAGCATGTCCCAAATCTGGAAACTCGCGTCGCAGCAAT
TTTTCGCCACAACCACTCGATTATCCCCGAGGGCAGCACCATCGTCGAAGAAGGAGATGAAGTATTTTTCATCGCCTCTT
CTCGTGATATTCGGGCTGTCATGAATGAATTGCGCCGCATGGATAAACCTGTCAGACGAGTGATGATTGCTGGTGGTGGC
AGAATCGGCCGACGTCTGGCTGAAGTATTGCAACAGTCCCATCAGGTACGGATTATCGAACGGGATATCAAAGTATGTGA
ATCACTGACTCAAAGCCTGCATAACGTACTGATTCTGCATGGCGATGTTACCGACGAAGAATTATTGGAAAGTGAAAATA
TCAGCGAAATGGATATTTTCTGCGCGCTGACCGATAGCGAGGAAAACAATATCATGGCTGCCCTGATGGCCAAACGAAAA
GGAGCACGCAAGGTAATTGCACTGATCAACCGCAGTATTTATGTGGATTTGATGCAAGGTAGCGGAATCGATATTGCCAT
TTCACCCGCACAGGTCACGATCGGTTCACTGCTGGCTTACGTTCGCCAGGGGGATGTAGCGGTGGTGCATAGCCTGCGGC
GCGGTGCAGCAGAAGCTCTGGAGCTGGTAGCTCACGGCGATGCTAGTTCTTCTCGGATAGTTGGCCGCAAAATCGAAGAG
ATCAAATTACCCAGAGGAACCACCATTGGTGCCATCGTACGCGGCCTACCACCTAGGGATGTTTATCACCAAAAATTATC
TGAAATAGAAGAAAATAGCGTTTCTGATCAATGGAATCAGGCTACGGTGATCATCACACATCATGATACGGTGATCGAGC
AGGACGATCACGTCATTCTATTTGTCGTCAATAAAAAAATGGTGCGACAGGTTGAAAAATTGTTTCAGGTCAATGTTGGT
TTTTTGTAA

Upstream 100 bases:

>100_bases
ACTTACCAACCAACCATGCAATCTTCCGCTCCATGATCCACCATGAGCCGAAATACAGGCAGTATCAAATGTTATCGACT
TGTGAAAGCAGGCATCTCTA

Downstream 100 bases:

>100_bases
TCGCATACTATGAAATATTTCCTGTGAATCACTTCCTTGCGGTAGCCAATATCCTGAGCAGGGTAATACTAATGTTCGGG
CTGGTTTTGCTGATTCCCTG

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MKIVILGAGRVGSTVAESLVSESNDITVVDQARSSLTPLQERLDLRTVIGSASHPNVMIQAGMEDADMMLALTGSDETNL
VACKLAASLFNTPTRIARIRTTDYLDHPDIFSKENFCVDFAICPERILTQYIEKLIEFPGALQVLDFASGKVSLVAVKAV
RGGPLIGRHLKELRQHVPNLETRVAAIFRHNHSIIPEGSTIVEEGDEVFFIASSRDIRAVMNELRRMDKPVRRVMIAGGG
RIGRRLAEVLQQSHQVRIIERDIKVCESLTQSLHNVLILHGDVTDEELLESENISEMDIFCALTDSEENNIMAALMAKRK
GARKVIALINRSIYVDLMQGSGIDIAISPAQVTIGSLLAYVRQGDVAVVHSLRRGAAEALELVAHGDASSSRIVGRKIEE
IKLPRGTTIGAIVRGLPPRDVYHQKLSEIEENSVSDQWNQATVIITHHDTVIEQDDHVILFVVNKKMVRQVEKLFQVNVG
FL

Sequences:

>Translated_482_residues
MKIVILGAGRVGSTVAESLVSESNDITVVDQARSSLTPLQERLDLRTVIGSASHPNVMIQAGMEDADMMLALTGSDETNL
VACKLAASLFNTPTRIARIRTTDYLDHPDIFSKENFCVDFAICPERILTQYIEKLIEFPGALQVLDFASGKVSLVAVKAV
RGGPLIGRHLKELRQHVPNLETRVAAIFRHNHSIIPEGSTIVEEGDEVFFIASSRDIRAVMNELRRMDKPVRRVMIAGGG
RIGRRLAEVLQQSHQVRIIERDIKVCESLTQSLHNVLILHGDVTDEELLESENISEMDIFCALTDSEENNIMAALMAKRK
GARKVIALINRSIYVDLMQGSGIDIAISPAQVTIGSLLAYVRQGDVAVVHSLRRGAAEALELVAHGDASSSRIVGRKIEE
IKLPRGTTIGAIVRGLPPRDVYHQKLSEIEENSVSDQWNQATVIITHHDTVIEQDDHVILFVVNKKMVRQVEKLFQVNVG
FL
>Mature_482_residues
MKIVILGAGRVGSTVAESLVSESNDITVVDQARSSLTPLQERLDLRTVIGSASHPNVMIQAGMEDADMMLALTGSDETNL
VACKLAASLFNTPTRIARIRTTDYLDHPDIFSKENFCVDFAICPERILTQYIEKLIEFPGALQVLDFASGKVSLVAVKAV
RGGPLIGRHLKELRQHVPNLETRVAAIFRHNHSIIPEGSTIVEEGDEVFFIASSRDIRAVMNELRRMDKPVRRVMIAGGG
RIGRRLAEVLQQSHQVRIIERDIKVCESLTQSLHNVLILHGDVTDEELLESENISEMDIFCALTDSEENNIMAALMAKRK
GARKVIALINRSIYVDLMQGSGIDIAISPAQVTIGSLLAYVRQGDVAVVHSLRRGAAEALELVAHGDASSSRIVGRKIEE
IKLPRGTTIGAIVRGLPPRDVYHQKLSEIEENSVSDQWNQATVIITHHDTVIEQDDHVILFVVNKKMVRQVEKLFQVNVG
FL

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=483, Percent_Identity=53.416149068323, Blast_Score=509, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 53229; Mature: 53229

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVILGAGRVGSTVAESLVSESNDITVVDQARSSLTPLQERLDLRTVIGSASHPNVMIQ
CEEEEEECCCCCHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCCCEEEE
AGMEDADMMLALTGSDETNLVACKLAASLFNTPTRIARIRTTDYLDHPDIFSKENFCVDF
ECCCCCEEEEEEECCCCCCEEHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCCCEEEE
AICPERILTQYIEKLIEFPGALQVLDFASGKVSLVAVKAVRGGPLIGRHLKELRQHVPNL
EECHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCH
ETRVAAIFRHNHSIIPEGSTIVEEGDEVFFIASSRDIRAVMNELRRMDKPVRRVMIAGGG
HHHHHHHHHCCCCCCCCCCHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCC
RIGRRLAEVLQQSHQVRIIERDIKVCESLTQSLHNVLILHGDVTDEELLESENISEMDIF
HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHCCCCCCEEEE
CALTDSEENNIMAALMAKRKGARKVIALINRSIYVDLMQGSGIDIAISPAQVTIGSLLAY
EEEECCCCCCCHHHHHHHHCCHHHHHHHHCCEEEEEEECCCCEEEEECCHHHHHHHHHHH
VRQGDVAVVHSLRRGAAEALELVAHGDASSSRIVGRKIEEIKLPRGTTIGAIVRGLPPRD
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHEECCCCCCHHHHHCCCCCHH
VYHQKLSEIEENSVSDQWNQATVIITHHDTVIEQDDHVILFVVNKKMVRQVEKLFQVNVG
HHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEECCCCEEEEEECHHHHHHHHHHHHHCCC
FL
CC
>Mature Secondary Structure
MKIVILGAGRVGSTVAESLVSESNDITVVDQARSSLTPLQERLDLRTVIGSASHPNVMIQ
CEEEEEECCCCCHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCCCEEEE
AGMEDADMMLALTGSDETNLVACKLAASLFNTPTRIARIRTTDYLDHPDIFSKENFCVDF
ECCCCCEEEEEEECCCCCCEEHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCCCEEEE
AICPERILTQYIEKLIEFPGALQVLDFASGKVSLVAVKAVRGGPLIGRHLKELRQHVPNL
EECHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCH
ETRVAAIFRHNHSIIPEGSTIVEEGDEVFFIASSRDIRAVMNELRRMDKPVRRVMIAGGG
HHHHHHHHHCCCCCCCCCCHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCC
RIGRRLAEVLQQSHQVRIIERDIKVCESLTQSLHNVLILHGDVTDEELLESENISEMDIF
HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHCCCCCCEEEE
CALTDSEENNIMAALMAKRKGARKVIALINRSIYVDLMQGSGIDIAISPAQVTIGSLLAY
EEEECCCCCCCHHHHHHHHCCHHHHHHHHCCEEEEEEECCCCEEEEECCHHHHHHHHHHH
VRQGDVAVVHSLRRGAAEALELVAHGDASSSRIVGRKIEEIKLPRGTTIGAIVRGLPPRD
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHEECCCCCCHHHHHCCCCCHH
VYHQKLSEIEENSVSDQWNQATVIITHHDTVIEQDDHVILFVVNKKMVRQVEKLFQVNVG
HHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEECCCCEEEEEECHHHHHHHHHHHHHCCC
FL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7948029; 9720051 [H]