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The map label for this gene is petC [H]

Identifier: 114331110

GI number: 114331110

Start: 1153550

End: 1154254

Strand: Direct

Name: petC [H]

Synonym: Neut_1112

Alternate gene names: 114331110

Gene position: 1153550-1154254 (Clockwise)

Preceding gene: 114331109

Following gene: 114331111

Centisome position: 43.35

GC content: 40.0

Gene sequence:

>705_bases
ATGAGAATGATAAAAATTTTATTACTGGCTGTATTACTAACTCCTTTTGTCGCACATTCTTCCGGGCAGGAAGTTGAGTT
AGACAAAGCTCCTATAGATAGGACTGATAAGGAATCGCTGAAACGTGGTGCCAATAGTTTCGTTGAATACTGTCTCACAT
GTCATGGCGCTGATTTTATGCGCTATAACCGACATCGTGATATCGGAATGAGTGAGGATGATATTCGTACGGAACTTATT
CATACCGGACAAAAGACTGGCGATCTTATGGAAGCAGCTATGAGAAAGAAAGAGGCTGAGCAATGGTTCGGTGTGGCTCC
TCCAGATTTATCTGTTATCGCTCGATCCCGTGGAGCAGATTGGTTGTATACCTATTTACGTACTTTTTATCAGGATACGT
CCACTTATAGTGGTTGGAATAACTTGACTTTTGACAAAGTTGCAATGCCTCACGTTCTGCATCATTTACAAGGATGGCAG
ACATTGGAACCGGGAACCAAAAATTTGGTTTTAACAAAATCCGGGACGATGACAAAAGGGGAATACGATAAATTTGTAGC
TGATTTAGTAAATTATATGGTTTATTTAGGTGAGCCACATGCATCTTATCGTAAAGAACTTGGAGTCATCGTATTACTGT
TTCTGTTTGGTATGCTTGGGCTAACCTATCTGCTTAAGAAAGAATACTGGAGAGATATACATTGA

Upstream 100 bases:

>100_bases
TGGCACAAATCTTTACTACGATTTATTTTGCTTTCTTTCTGCTGATGCCGTGGTATAGCAAAATAGATAAAGTTAAACCT
GAACCAGAGAACGTAACAAA

Downstream 100 bases:

>100_bases
AGATTCTTCAGAATTATCTTCTGTAAATTAATTACTTGTTATACAGAAGCTATGATGACATTATATTCAACAGCAACTTG
TCCTTTCAGCCATCGTTGTC

Product: cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRMIKILLLAVLLTPFVAHSSGQEVELDKAPIDRTDKESLKRGANSFVEYCLTCHGADFMRYNRHRDIGMSEDDIRTELI
HTGQKTGDLMEAAMRKKEAEQWFGVAPPDLSVIARSRGADWLYTYLRTFYQDTSTYSGWNNLTFDKVAMPHVLHHLQGWQ
TLEPGTKNLVLTKSGTMTKGEYDKFVADLVNYMVYLGEPHASYRKELGVIVLLFLFGMLGLTYLLKKEYWRDIH

Sequences:

>Translated_234_residues
MRMIKILLLAVLLTPFVAHSSGQEVELDKAPIDRTDKESLKRGANSFVEYCLTCHGADFMRYNRHRDIGMSEDDIRTELI
HTGQKTGDLMEAAMRKKEAEQWFGVAPPDLSVIARSRGADWLYTYLRTFYQDTSTYSGWNNLTFDKVAMPHVLHHLQGWQ
TLEPGTKNLVLTKSGTMTKGEYDKFVADLVNYMVYLGEPHASYRKELGVIVLLFLFGMLGLTYLLKKEYWRDIH
>Mature_234_residues
MRMIKILLLAVLLTPFVAHSSGQEVELDKAPIDRTDKESLKRGANSFVEYCLTCHGADFMRYNRHRDIGMSEDDIRTELI
HTGQKTGDLMEAAMRKKEAEQWFGVAPPDLSVIARSRGADWLYTYLRTFYQDTSTYSGWNNLTFDKVAMPHVLHHLQGWQ
TLEPGTKNLVLTKSGTMTKGEYDKFVADLVNYMVYLGEPHASYRKELGVIVLLFLFGMLGLTYLLKKEYWRDIH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 26934; Mature: 26934

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMIKILLLAVLLTPFVAHSSGQEVELDKAPIDRTDKESLKRGANSFVEYCLTCHGADFM
CHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
RYNRHRDIGMSEDDIRTELIHTGQKTGDLMEAAMRKKEAEQWFGVAPPDLSVIARSRGAD
HHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCH
WLYTYLRTFYQDTSTYSGWNNLTFDKVAMPHVLHHLQGWQTLEPGTKNLVLTKSGTMTKG
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC
EYDKFVADLVNYMVYLGEPHASYRKELGVIVLLFLFGMLGLTYLLKKEYWRDIH
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRMIKILLLAVLLTPFVAHSSGQEVELDKAPIDRTDKESLKRGANSFVEYCLTCHGADFM
CHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
RYNRHRDIGMSEDDIRTELIHTGQKTGDLMEAAMRKKEAEQWFGVAPPDLSVIARSRGAD
HHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCH
WLYTYLRTFYQDTSTYSGWNNLTFDKVAMPHVLHHLQGWQTLEPGTKNLVLTKSGTMTKG
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC
EYDKFVADLVNYMVYLGEPHASYRKELGVIVLLFLFGMLGLTYLLKKEYWRDIH
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA