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The map label for this gene is insF1 [C]

Identifier: 114331056

GI number: 114331056

Start: 1094948

End: 1095262

Strand: Reverse

Name: insF1 [C]

Synonym: Neut_1058

Alternate gene names: 114331056

Gene position: 1095262-1094948 (Counterclockwise)

Preceding gene: 114331057

Following gene: 114331051

Centisome position: 41.16

GC content: 44.76

Gene sequence:

>315_bases
TTGGATCGTGGATCGCAATATGCCAGCAAACAGTATCACCAACTTTTAAAAATGCATGGCTTTATCGGCAGTATGAGTCG
TGTGGGAAATTGTTGGAAAAACAAGCGTAGTGTAGTTTCGCGAGCTGACAAGCGAGAGGACAATGTCCGGCATAATTCAG
TGGCCGAGAGCTTTTTCGGTAGCCTTAAACAGAAGCAAATCCACTGGCAACATTACCTGACTCGCTATGCAGCCCAGCAA
GAGGTACTGCAGTATATTTCCATGTTTTATAACAGCCAGCGACGTGAAGATTTAAGATCGAAGCGGATGCTTTAA

Upstream 100 bases:

>100_bases
CGCTGTCCTATCAGTTCTATACCTGGCAAACAGCAACAACTTACAGATAGCGGAAATGGCTGTCTGACAACGTCAGCCGC
AAGCAGGGCTGACAGTACAT

Downstream 100 bases:

>100_bases
GCTGGTGGGATGGAAAGTCAAACAGGCACTCCCTCAATTATGCTGTATGCTGATTTGGTCGAAACGATTCTGGTCAACTG
GAAGCCAGACCGATTGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Transposase; IS30 Family Transposase; Integrase; ISCps2 Transposase OrfB; IS3 Element Protein InsF; ISEhe3 OrfB; ISRSO8-Transposase OrfB Protein; Integrase Core Domain Protein; IS1 Transposase InsB; Transposase B TnpA; Transposase OrfB For Insertion Sequence Element; IS5 Family Transposase OrfB; Transposase Fragment; Transposase InsF For Insertion Sequence IS3A/B/C/D/E/FA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MDRGSQYASKQYHQLLKMHGFIGSMSRVGNCWKNKRSVVSRADKREDNVRHNSVAESFFGSLKQKQIHWQHYLTRYAAQQ
EVLQYISMFYNSQRREDLRSKRML

Sequences:

>Translated_104_residues
MDRGSQYASKQYHQLLKMHGFIGSMSRVGNCWKNKRSVVSRADKREDNVRHNSVAESFFGSLKQKQIHWQHYLTRYAAQQ
EVLQYISMFYNSQRREDLRSKRML
>Mature_104_residues
MDRGSQYASKQYHQLLKMHGFIGSMSRVGNCWKNKRSVVSRADKREDNVRHNSVAESFFGSLKQKQIHWQHYLTRYAAQQ
EVLQYISMFYNSQRREDLRSKRML

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12488; Mature: 12488

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRGSQYASKQYHQLLKMHGFIGSMSRVGNCWKNKRSVVSRADKREDNVRHNSVAESFFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLKQKQIHWQHYLTRYAAQQEVLQYISMFYNSQRREDLRSKRML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
>Mature Secondary Structure
MDRGSQYASKQYHQLLKMHGFIGSMSRVGNCWKNKRSVVSRADKREDNVRHNSVAESFFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLKQKQIHWQHYLTRYAAQQEVLQYISMFYNSQRREDLRSKRML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA