Click here to switch to the map view.

The map label for this gene is 114331015

Identifier: 114331015

GI number: 114331015

Start: 1045363

End: 1046397

Strand: Reverse

Name: 114331015

Synonym: Neut_1013

Alternate gene names: NA

Gene position: 1046397-1045363 (Counterclockwise)

Preceding gene: 114331016

Following gene: 114331014

Centisome position: 39.32

GC content: 51.4

Gene sequence:

>1035_bases
ATGCGCCAGATTCTCAATACCCTTTATATCCTGACTCCCAACGCTTATGCACATCTGGAAAACGATACCCTGCGCATCGA
TGTGGAACGAGAAAAGAAATTACAGGTACCGTTACATCATCTGGGCTCAGTCGTATGCTTTGGTAACGTGCTGCTTTCCC
CGGCCCTGATGCATCGTTGTGCCGATAATGGCATCAGCCTCGTACTGGTGGATGCTAATGGCCGCTTCAAGGCTCGCCTG
GAAGGTTCGGTCAGCGGCAATGTTTTACTACGCCAGGCTCAGCATCGCAAAGCGAACGATAAAAATTTTGCGTTGGCAAC
TACACAGGCAATCATTGCCGGCAAATTGCGCAATGCACGGCAGGTACTGCTACGCGGTGCACGCGAAAGTAACGACGAGG
CTGACCAGAGAATATTGAGCGGTGCCTCGGAATCTCTGGCCTTCTCAATCCGAAGCTTGCCACAATCAAGAAATCTTGAT
CATGTACGCGGGATTGAGGGAGATGCGGCTAAAACTTATTTTTCTGCTCTGCCCCATCTGGTCCGCAAAGATATACGTAA
ATTCTTTACAATGGACGGACGAACACGCCGCCCGCCACGTGATCGTTTCAATGCCATGCTTTCATTTATTTATTCCATGG
TCATGAATGATTGCCGCTCGGCACTGGAAAGTGTCGGACTGGATCCGCAAATAGGTTTTTTGCATGCAATACGCCCAGGA
AGAGCTGCACTAGCACTGGATCTGATGGAGGAATTCCGTGCATTCCTGGCCGACCGGCTGGTACTGACGCTGATCAACCG
CGGGCAGATCACCGCACAGGATTTGCAGGTGCGGGAAGGCGGGGCAGTCCATCTGGAGGACAAAGCCAGGAAAGCTGTAG
TTGTTGCTTATCAGGAACGCAAGCAGGAAGAAGTTACCCATCCGTTACTGGGAACCAAAGTGCCTATCAGCCTGCTGCCG
CAACTTCAGGCAAGATTCATGGCCCGTGTTATACGCGGCGAAATGGATGGTTATCTCCCTTTCCTGACCAGATAG

Upstream 100 bases:

>100_bases
AAAGACATTTGTCAGCCAGAAGTATTGGCGCAGAAGTCGAATTACCGAACAGCACAGGCAGCGTTATTTACTGTCAATGA
TTAACTGATCAAAACAGACT

Downstream 100 bases:

>100_bases
TGATGCTGATTATTGTTACCTACGACGTTTCAACAGAAACCAAAGCTGGCCGCAAACGATTGCGACGAATCGCAAAAGTT
TGCGAAAGCATCGGGCAGCG

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRQILNTLYILTPNAYAHLENDTLRIDVEREKKLQVPLHHLGSVVCFGNVLLSPALMHRCADNGISLVLVDANGRFKARL
EGSVSGNVLLRQAQHRKANDKNFALATTQAIIAGKLRNARQVLLRGARESNDEADQRILSGASESLAFSIRSLPQSRNLD
HVRGIEGDAAKTYFSALPHLVRKDIRKFFTMDGRTRRPPRDRFNAMLSFIYSMVMNDCRSALESVGLDPQIGFLHAIRPG
RAALALDLMEEFRAFLADRLVLTLINRGQITAQDLQVREGGAVHLEDKARKAVVVAYQERKQEEVTHPLLGTKVPISLLP
QLQARFMARVIRGEMDGYLPFLTR

Sequences:

>Translated_344_residues
MRQILNTLYILTPNAYAHLENDTLRIDVEREKKLQVPLHHLGSVVCFGNVLLSPALMHRCADNGISLVLVDANGRFKARL
EGSVSGNVLLRQAQHRKANDKNFALATTQAIIAGKLRNARQVLLRGARESNDEADQRILSGASESLAFSIRSLPQSRNLD
HVRGIEGDAAKTYFSALPHLVRKDIRKFFTMDGRTRRPPRDRFNAMLSFIYSMVMNDCRSALESVGLDPQIGFLHAIRPG
RAALALDLMEEFRAFLADRLVLTLINRGQITAQDLQVREGGAVHLEDKARKAVVVAYQERKQEEVTHPLLGTKVPISLLP
QLQARFMARVIRGEMDGYLPFLTR
>Mature_344_residues
MRQILNTLYILTPNAYAHLENDTLRIDVEREKKLQVPLHHLGSVVCFGNVLLSPALMHRCADNGISLVLVDANGRFKARL
EGSVSGNVLLRQAQHRKANDKNFALATTQAIIAGKLRNARQVLLRGARESNDEADQRILSGASESLAFSIRSLPQSRNLD
HVRGIEGDAAKTYFSALPHLVRKDIRKFFTMDGRTRRPPRDRFNAMLSFIYSMVMNDCRSALESVGLDPQIGFLHAIRPG
RAALALDLMEEFRAFLADRLVLTLINRGQITAQDLQVREGGAVHLEDKARKAVVVAYQERKQEEVTHPLLGTKVPISLLP
QLQARFMARVIRGEMDGYLPFLTR

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 38591; Mature: 38591

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQILNTLYILTPNAYAHLENDTLRIDVEREKKLQVPLHHLGSVVCFGNVLLSPALMHRC
CHHHHCEEEEECCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ADNGISLVLVDANGRFKARLEGSVSGNVLLRQAQHRKANDKNFALATTQAIIAGKLRNAR
HCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHH
QVLLRGARESNDEADQRILSGASESLAFSIRSLPQSRNLDHVRGIEGDAAKTYFSALPHL
HHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHH
VRKDIRKFFTMDGRTRRPPRDRFNAMLSFIYSMVMNDCRSALESVGLDPQIGFLHAIRPG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECCCC
RAALALDLMEEFRAFLADRLVLTLINRGQITAQDLQVREGGAVHLEDKARKAVVVAYQER
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHEECCCCEEEECCCCCCEEEEEHHHH
KQEEVTHPLLGTKVPISLLPQLQARFMARVIRGEMDGYLPFLTR
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRQILNTLYILTPNAYAHLENDTLRIDVEREKKLQVPLHHLGSVVCFGNVLLSPALMHRC
CHHHHCEEEEECCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ADNGISLVLVDANGRFKARLEGSVSGNVLLRQAQHRKANDKNFALATTQAIIAGKLRNAR
HCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHH
QVLLRGARESNDEADQRILSGASESLAFSIRSLPQSRNLDHVRGIEGDAAKTYFSALPHL
HHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHH
VRKDIRKFFTMDGRTRRPPRDRFNAMLSFIYSMVMNDCRSALESVGLDPQIGFLHAIRPG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEECCCC
RAALALDLMEEFRAFLADRLVLTLINRGQITAQDLQVREGGAVHLEDKARKAVVVAYQER
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHEECCCCEEEECCCCCCEEEEEHHHH
KQEEVTHPLLGTKVPISLLPQLQARFMARVIRGEMDGYLPFLTR
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]