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The map label for this gene is yedE [H]

Identifier: 114331006

GI number: 114331006

Start: 1034587

End: 1035789

Strand: Reverse

Name: yedE [H]

Synonym: Neut_1004

Alternate gene names: 114331006

Gene position: 1035789-1034587 (Counterclockwise)

Preceding gene: 114331007

Following gene: 114331005

Centisome position: 38.92

GC content: 51.45

Gene sequence:

>1203_bases
ATGAGTTGGTACAACTTCAAATATCAGTATCTGGTACGTTTTTGGTTACCTGTACCTGCAGTGATTGCAGCCGGTATTCT
CTCTGCCTTTTACTTCGGCGTTACCGGCACTTTCTGGGCCGTAACAGGTGAATTCACCCGCTGGGGCGGTCATATCCTGC
AATGGCTGGGCCTGGATGTTTCCCACTGGGGTTATTTTCAGGTCATCGGTCTGCAGGGCTCACCGCTGACACGTATTGAT
GGAGTGATGATCCTCGGTATGTTTGCAGGGTGTTTCTCGGCAGCATTATGGGCCAATAACGTCAAGTTGCGTTTACCACA
GCACCGCATTCGTGTGTTCCAGGCCATTGTGGGGGGCATTATTGCCGGCTTTGGAGCGCGCCTGGCTATGGGATGTAATC
TGGCGGCGTTTTTTACCGGTATTCCACAGTTTTCTTTGCATGCCTGGTTTTTTGCTATTGCTACCGCAATCGGCTCGCTG
GCGGGCGCCAAGGTCAGCCTGTTACCGGTATTTCGCATCCCGGTACAGCTGCAAAAAGTGTCGGCAGCGCAACCGCTTAA
TCAGCATGCAACCCGGGAACGGCAACACTTTTGCATCGGCATGCTATTGTTTATCGCTTTTGTGCTGTGGGCGGCTTCCA
AGGCGCTGGATGAACCCAAGCTGGGTTATGCTGCCTTGTTTGGCCTGGCTTTTGGCCTCATTATTGAACGTGCGCAGGTG
TGTTTCACTTCAGCGTTTCGTGATCTGTGGATTACTGGTCGTACACAAATGGCTAAAGCGATTATCGCGGGTATGGCAGT
AGGCACAATTGGTGTTTACAGCTACGTACAACTGGGAATGGATTCTAAAATATTCTGGGCCGGGCCAAATGCAGTCATTG
GTGGATTGTTGTTCGGCTTTGGCATCGTGCTGGCAGGTGGTTGCGAAACAGGCTGGATGTATCGCGCTGTGGAAGGACAG
GTGCATTTCTGGCTGGTGGGATTAGGTAACATCATCGGTTCCACACTGCTGGCACTGGTGTGGGATGATCTGGCACCCCT
CCTTGTCGTAAATTTTGACAAGATCAATCTCCTTAAAACATTCGGACCGCAAGGCGGTCTACTGGCCACCTACATTATGC
TGGGTGTATTTCTGGCACTGGTGCTGTACTGGGAAAAATATTTCTTTGCCCGGAAAGCCCGACAAGCTTCGCAAACAGCC
TGA

Upstream 100 bases:

>100_bases
TACAAAGACTCCTTAATCACTACATCCAAAAGTAAAATACATGTAAAAGTTATAAACTATAAAATGTACCACGCGTATCC
ATGGGGCAAAAGAATAGAAA

Downstream 100 bases:

>100_bases
ACATAAGCGCTTCCCATGAAATCAACTACCATCATCCCTGATTTTCGTCTCGATATGATAGGAGAACCCTGCCCCTATCC
TGCTGTAGCAACGTTGGAAG

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSWYNFKYQYLVRFWLPVPAVIAAGILSAFYFGVTGTFWAVTGEFTRWGGHILQWLGLDVSHWGYFQVIGLQGSPLTRID
GVMILGMFAGCFSAALWANNVKLRLPQHRIRVFQAIVGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSL
AGAKVSLLPVFRIPVQLQKVSAAQPLNQHATRERQHFCIGMLLFIAFVLWAASKALDEPKLGYAALFGLAFGLIIERAQV
CFTSAFRDLWITGRTQMAKAIIAGMAVGTIGVYSYVQLGMDSKIFWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQ
VHFWLVGLGNIIGSTLLALVWDDLAPLLVVNFDKINLLKTFGPQGGLLATYIMLGVFLALVLYWEKYFFARKARQASQTA

Sequences:

>Translated_400_residues
MSWYNFKYQYLVRFWLPVPAVIAAGILSAFYFGVTGTFWAVTGEFTRWGGHILQWLGLDVSHWGYFQVIGLQGSPLTRID
GVMILGMFAGCFSAALWANNVKLRLPQHRIRVFQAIVGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSL
AGAKVSLLPVFRIPVQLQKVSAAQPLNQHATRERQHFCIGMLLFIAFVLWAASKALDEPKLGYAALFGLAFGLIIERAQV
CFTSAFRDLWITGRTQMAKAIIAGMAVGTIGVYSYVQLGMDSKIFWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQ
VHFWLVGLGNIIGSTLLALVWDDLAPLLVVNFDKINLLKTFGPQGGLLATYIMLGVFLALVLYWEKYFFARKARQASQTA
>Mature_399_residues
SWYNFKYQYLVRFWLPVPAVIAAGILSAFYFGVTGTFWAVTGEFTRWGGHILQWLGLDVSHWGYFQVIGLQGSPLTRIDG
VMILGMFAGCFSAALWANNVKLRLPQHRIRVFQAIVGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSLA
GAKVSLLPVFRIPVQLQKVSAAQPLNQHATRERQHFCIGMLLFIAFVLWAASKALDEPKLGYAALFGLAFGLIIERAQVC
FTSAFRDLWITGRTQMAKAIIAGMAVGTIGVYSYVQLGMDSKIFWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQV
HFWLVGLGNIIGSTLLALVWDDLAPLLVVNFDKINLLKTFGPQGGLLATYIMLGVFLALVLYWEKYFFARKARQASQTA

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=398, Percent_Identity=71.8592964824121, Blast_Score=570, Evalue=1e-164,
Organism=Escherichia coli, GI1788323, Length=100, Percent_Identity=40, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 43835; Mature: 43704

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWYNFKYQYLVRFWLPVPAVIAAGILSAFYFGVTGTFWAVTGEFTRWGGHILQWLGLDV
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCC
SHWGYFQVIGLQGSPLTRIDGVMILGMFAGCFSAALWANNVKLRLPQHRIRVFQAIVGGI
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH
IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSLAGAKVSLLPVFRIPVQLQKV
HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHH
SAAQPLNQHATRERQHFCIGMLLFIAFVLWAASKALDEPKLGYAALFGLAFGLIIERAQV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
CFTSAFRDLWITGRTQMAKAIIAGMAVGTIGVYSYVQLGMDSKIFWAGPNAVIGGLLFGF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
GIVLAGGCETGWMYRAVEGQVHFWLVGLGNIIGSTLLALVWDDLAPLLVVNFDKINLLKT
HHHEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
FGPQGGLLATYIMLGVFLALVLYWEKYFFARKARQASQTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SWYNFKYQYLVRFWLPVPAVIAAGILSAFYFGVTGTFWAVTGEFTRWGGHILQWLGLDV
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCC
SHWGYFQVIGLQGSPLTRIDGVMILGMFAGCFSAALWANNVKLRLPQHRIRVFQAIVGGI
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH
IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSLAGAKVSLLPVFRIPVQLQKV
HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHH
SAAQPLNQHATRERQHFCIGMLLFIAFVLWAASKALDEPKLGYAALFGLAFGLIIERAQV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
CFTSAFRDLWITGRTQMAKAIIAGMAVGTIGVYSYVQLGMDSKIFWAGPNAVIGGLLFGF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
GIVLAGGCETGWMYRAVEGQVHFWLVGLGNIIGSTLLALVWDDLAPLLVVNFDKINLLKT
HHHEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
FGPQGGLLATYIMLGVFLALVLYWEKYFFARKARQASQTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]