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The map label for this gene is 114330942

Identifier: 114330942

GI number: 114330942

Start: 968204

End: 968626

Strand: Direct

Name: 114330942

Synonym: Neut_0939

Alternate gene names: NA

Gene position: 968204-968626 (Clockwise)

Preceding gene: 114330941

Following gene: 114330943

Centisome position: 36.38

GC content: 44.68

Gene sequence:

>423_bases
GTGGCAGGATATGAGCTGGACAAAAAGGGACTCAACACCAAAATATATCTGGCCGTGGATGCGCATGGTATGCTGGTCAA
AATCCTTGTTACACCAGGTGTCACTACTGATTGCACGCAAGTTAGGTACCTGATTGAAGAAGTTGGTGCAGATTACCTGT
TGGCAGATCGTGGCTATGATAGTAATGCAATCATTGATCTGGCGAAAAAACAGAAGATGGAAATTGTTATCCCGCCCAAA
AAGGATCGAAAGATAAAAACGTCTAATGATAAAGCGCTGTATGAACTGAGGCATCTTGTCGAAAATGCTTTCCTTCATTT
CAAAAGATGGAGTGGCGTTGCCACAAGGTACGCCAAAAACACCTCTTCTTTCCTTGCCGCCGTACAAATTAGATGTATCA
CCCTCTGGGCGGGTGTCTCGTGA

Upstream 100 bases:

>100_bases
GAAAAATTGCTGGAAATTCTGATGGATGATCTGGATTATGAATAGCTGATGATTGATGCTAGCCACTGTAAAGTTCATCC
ACATGCCAGCGGAGCCAGAG

Downstream 100 bases:

>100_bases
CCACGATGTCTGGGATGTGGCTCACATTTTCCTGAAAATATTTTTCCACTGAATATTTGCTATCCATCTTATCAATATTC
AATATTCAATATTCACTTTG

Product: transposase, IS4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAGYELDKKGLNTKIYLAVDAHGMLVKILVTPGVTTDCTQVRYLIEEVGADYLLADRGYDSNAIIDLAKKQKMEIVIPPK
KDRKIKTSNDKALYELRHLVENAFLHFKRWSGVATRYAKNTSSFLAAVQIRCITLWAGVS

Sequences:

>Translated_140_residues
MAGYELDKKGLNTKIYLAVDAHGMLVKILVTPGVTTDCTQVRYLIEEVGADYLLADRGYDSNAIIDLAKKQKMEIVIPPK
KDRKIKTSNDKALYELRHLVENAFLHFKRWSGVATRYAKNTSSFLAAVQIRCITLWAGVS
>Mature_139_residues
AGYELDKKGLNTKIYLAVDAHGMLVKILVTPGVTTDCTQVRYLIEEVGADYLLADRGYDSNAIIDLAKKQKMEIVIPPKK
DRKIKTSNDKALYELRHLVENAFLHFKRWSGVATRYAKNTSSFLAAVQIRCITLWAGVS

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 15734; Mature: 15602

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGYELDKKGLNTKIYLAVDAHGMLVKILVTPGVTTDCTQVRYLIEEVGADYLLADRGYD
CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCC
SNAIIDLAKKQKMEIVIPPKKDRKIKTSNDKALYELRHLVENAFLHFKRWSGVATRYAKN
CCCEEEECCCCCEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
TSSFLAAVQIRCITLWAGVS
HHHHHHHHHEEEEEEEECCC
>Mature Secondary Structure 
AGYELDKKGLNTKIYLAVDAHGMLVKILVTPGVTTDCTQVRYLIEEVGADYLLADRGYD
CCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCC
SNAIIDLAKKQKMEIVIPPKKDRKIKTSNDKALYELRHLVENAFLHFKRWSGVATRYAKN
CCCEEEECCCCCEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
TSSFLAAVQIRCITLWAGVS
HHHHHHHHHEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8126444 [H]