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The map label for this gene is ygiM [C]

Identifier: 114330855

GI number: 114330855

Start: 867771

End: 868454

Strand: Direct

Name: ygiM [C]

Synonym: Neut_0849

Alternate gene names: 114330855

Gene position: 867771-868454 (Clockwise)

Preceding gene: 114330854

Following gene: 114330857

Centisome position: 32.61

GC content: 49.12

Gene sequence:

>684_bases
ATGAGTAGACTTACCCATCTTCTGATTATTTCTATCGTTTGTGTATGTATATTGCCACTGCCGGCTCGGGCTGAAAAAGG
CTATGCCAGCGATCAGGTGGAAGTGTTAGTACGAACGGGCCCCAGTCATAAACATGCAATTGTGAAGGTGTTGAAAAGTG
GTGCTGAGCTAGAAGTGCTGGAGCGCGACCGGAAGAGCGGGTATGCCAGGGTCAGGACAGCTGGTGGTGCTGAAGGATGG
GTGTTGACACGGCACCTGATGGCCGAGCCGGCAGCGAGAGTGTTACTCGAAGCATTAAGCAACCAGTTTTCAGGCGATGA
CAATCGCCCGGATAATCCGCGTGCGCAGGCTGATCTTATCAGGCATGAGTATGAAACACTGATGCAACGGGCAACGATGC
TTGAGAAGAATAACAATCAACTGGAGGCGGAGCTATCCAAAATAAAGCAGTTGGCCGCCAATGCTGTACAGCTTGATAAT
CAGAATCAGGAACTACGGCAGCAAACAGATGTTTTAACGGCAAAACTTGGCAAACTTGAGCAAGAAAATCAGACGCTGGG
CAAGCAGGTCGAACGTGAGTGGTTTTACGCTGGAGGATTGGTGCTGTTTGCCGGTTTATTTTTGGGGCTAGTTATTCCAC
GTATTCAATGGCGCAAACGGTCACGCTACAGTGATTTTTCTTAA

Upstream 100 bases:

>100_bases
TTAGCGTTTCCAGATCAGGTCCGCGTAAAAACCGGATGTTTTGGTATGTGTTAACAGTGGCCGTACTATTTTGTTTCCGG
AACCAGCCACTATAAGTGAA

Downstream 100 bases:

>100_bases
GGGTACCTCGTCTGAAAGCCAATCTTCAGAAGTGATCTTAATGCAGGATCAATGCACTCGGGTGCTGAATACGTATTGAA
AAATGGTTTTTCTTGCGTGA

Product: SH3 type 3 domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSRLTHLLIISIVCVCILPLPARAEKGYASDQVEVLVRTGPSHKHAIVKVLKSGAELEVLERDRKSGYARVRTAGGAEGW
VLTRHLMAEPAARVLLEALSNQFSGDDNRPDNPRAQADLIRHEYETLMQRATMLEKNNNQLEAELSKIKQLAANAVQLDN
QNQELRQQTDVLTAKLGKLEQENQTLGKQVEREWFYAGGLVLFAGLFLGLVIPRIQWRKRSRYSDFS

Sequences:

>Translated_227_residues
MSRLTHLLIISIVCVCILPLPARAEKGYASDQVEVLVRTGPSHKHAIVKVLKSGAELEVLERDRKSGYARVRTAGGAEGW
VLTRHLMAEPAARVLLEALSNQFSGDDNRPDNPRAQADLIRHEYETLMQRATMLEKNNNQLEAELSKIKQLAANAVQLDN
QNQELRQQTDVLTAKLGKLEQENQTLGKQVEREWFYAGGLVLFAGLFLGLVIPRIQWRKRSRYSDFS
>Mature_226_residues
SRLTHLLIISIVCVCILPLPARAEKGYASDQVEVLVRTGPSHKHAIVKVLKSGAELEVLERDRKSGYARVRTAGGAEGWV
LTRHLMAEPAARVLLEALSNQFSGDDNRPDNPRAQADLIRHEYETLMQRATMLEKNNNQLEAELSKIKQLAANAVQLDNQ
NQELRQQTDVLTAKLGKLEQENQTLGKQVEREWFYAGGLVLFAGLFLGLVIPRIQWRKRSRYSDFS

Specific function: Unknown

COG id: COG3103

COG function: function code T; SH3 domain protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789435, Length=192, Percent_Identity=23.9583333333333, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25584; Mature: 25453

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLTHLLIISIVCVCILPLPARAEKGYASDQVEVLVRTGPSHKHAIVKVLKSGAELEVL
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEHEECCCCHHHHHHHHHHCCCCHHHH
ERDRKSGYARVRTAGGAEGWVLTRHLMAEPAARVLLEALSNQFSGDDNRPDNPRAQADLI
HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
RHEYETLMQRATMLEKNNNQLEAELSKIKQLAANAVQLDNQNQELRQQTDVLTAKLGKLE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QENQTLGKQVEREWFYAGGLVLFAGLFLGLVIPRIQWRKRSRYSDFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SRLTHLLIISIVCVCILPLPARAEKGYASDQVEVLVRTGPSHKHAIVKVLKSGAELEVL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEHEECCCCHHHHHHHHHHCCCCHHHH
ERDRKSGYARVRTAGGAEGWVLTRHLMAEPAARVLLEALSNQFSGDDNRPDNPRAQADLI
HHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
RHEYETLMQRATMLEKNNNQLEAELSKIKQLAANAVQLDNQNQELRQQTDVLTAKLGKLE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QENQTLGKQVEREWFYAGGLVLFAGLFLGLVIPRIQWRKRSRYSDFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA