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The map label for this gene is ydhD [C]

Identifier: 114330836

GI number: 114330836

Start: 845751

End: 846059

Strand: Direct

Name: ydhD [C]

Synonym: Neut_0829

Alternate gene names: 114330836

Gene position: 845751-846059 (Clockwise)

Preceding gene: 114330835

Following gene: 114330838

Centisome position: 31.78

GC content: 44.34

Gene sequence:

>309_bases
ATGGATATCGCTGATTCTATTGAGCAACAGGTATCAACGCACCCGGTGGTTTTATATATGAAAGGTACTCCACAGCAGCC
ACAATGCGGTTTTTCCGCTAATGCTGTACAAATATTGAGTGCTTGTGGCGTTGAGGATTTTTTCGCTGTAAATGTATTGG
CTGATCCGGAAATACGACAGGGTATCAAGGATTATTCCAGCTGGCCCACCATCCCTCAGCTGTATGTCAACGGGGAGTTT
GTTGGTGGATCGGATATCATGGCTGAGATGTTTCAGAATGGTGAACTGAAAAAACTGCTGGAAAAGTAA

Upstream 100 bases:

>100_bases
AGTAGTATTAACCAAGGTTTTGTATAAATTTGTTCCAGTTGAAGTGTTTGCTGTTCAGGAAACAAGTAGCTGCTTTATAA
ATTTAAAGAGGAAATTAAAT

Downstream 100 bases:

>100_bases
ATTCGATTGCTTGTGAATTTCTAACTGATTGCTGCAGCGATTACCCAGTAGCGTGCAAATTTTCCGATAGCAATAAAAAA
TGCTGCGGAGGCCCAGTTGA

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MDIADSIEQQVSTHPVVLYMKGTPQQPQCGFSANAVQILSACGVEDFFAVNVLADPEIRQGIKDYSSWPTIPQLYVNGEF
VGGSDIMAEMFQNGELKKLLEK

Sequences:

>Translated_102_residues
MDIADSIEQQVSTHPVVLYMKGTPQQPQCGFSANAVQILSACGVEDFFAVNVLADPEIRQGIKDYSSWPTIPQLYVNGEF
VGGSDIMAEMFQNGELKKLLEK
>Mature_102_residues
MDIADSIEQQVSTHPVVLYMKGTPQQPQCGFSANAVQILSACGVEDFFAVNVLADPEIRQGIKDYSSWPTIPQLYVNGEF
VGGSDIMAEMFQNGELKKLLEK

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=98, Percent_Identity=60.2040816326531, Blast_Score=130, Evalue=2e-31,
Organism=Homo sapiens, GI95113651, Length=95, Percent_Identity=46.3157894736842, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1787943, Length=98, Percent_Identity=52.0408163265306, Blast_Score=119, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17556042, Length=101, Percent_Identity=46.5346534653465, Blast_Score=99, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71988159, Length=92, Percent_Identity=41.304347826087, Blast_Score=89, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71988153, Length=92, Percent_Identity=41.304347826087, Blast_Score=89, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6325198, Length=103, Percent_Identity=53.3980582524272, Blast_Score=120, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6320303, Length=90, Percent_Identity=45.5555555555556, Blast_Score=88, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6321022, Length=79, Percent_Identity=49.3670886075949, Blast_Score=87, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24642023, Length=97, Percent_Identity=50.5154639175258, Blast_Score=109, Evalue=3e-25,
Organism=Drosophila melanogaster, GI19921242, Length=99, Percent_Identity=38.3838383838384, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11225; Mature: 11225

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIADSIEQQVSTHPVVLYMKGTPQQPQCGFSANAVQILSACGVEDFFAVNVLADPEIRQ
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECHHHHH
GIKDYSSWPTIPQLYVNGEFVGGSDIMAEMFQNGELKKLLEK
HHHHHCCCCCCCEEEECCEEECCHHHHHHHHCCCCHHHHHCC
>Mature Secondary Structure
MDIADSIEQQVSTHPVVLYMKGTPQQPQCGFSANAVQILSACGVEDFFAVNVLADPEIRQ
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECHHHHH
GIKDYSSWPTIPQLYVNGEFVGGSDIMAEMFQNGELKKLLEK
HHHHHCCCCCCCEEEECCEEECCHHHHHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]