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The map label for this gene is cbbS [H]

Identifier: 114330815

GI number: 114330815

Start: 823858

End: 824184

Strand: Direct

Name: cbbS [H]

Synonym: Neut_0805

Alternate gene names: 114330815

Gene position: 823858-824184 (Clockwise)

Preceding gene: 114330814

Following gene: 114330816

Centisome position: 30.96

GC content: 50.76

Gene sequence:

>327_bases
ATGGCCATTCAAGCCTATCACTTAACAAAAAAATACGAAACCTTTTCGTATCTTCCCCAGATGACGCCCGAGCAGGTGCG
CCGTCAGATCGCCTATGCCCTTGCTCAAGGCTGGAATCCTGCGGTTGAGCACGCTGTCAAAGGAACGTCTGCCAAGGAGA
GTTTTTGGCATATGTGGAAGCTGCCGATGTTCGGCGAGCAATCGGTCGATGCTGTGCTGGCCGAGATTGAGGCCTGCCAT
CGCGAATTTCCTGATCAAATGGTACGTTTCATCGCTTATGATAACTACTCGCAAAGTCAGGGCGTGGCTTTTGTTGTTTA
CCGCTAA

Upstream 100 bases:

>100_bases
CATTGCCCACAAGTAATGTTTCAAACCAAATTCGATCGATCTGCGTTCCAGTGAGACTGCGGCGATCGGATTCGATTCCT
AATTTTGAAAGGATATAGCT

Downstream 100 bases:

>100_bases
AACGAGCGGATCCATCCCAGGGGCGGGTTCTGGTTGCATGAAATCAAACTACTCAGTGCGACCAGCGGCCGCCTAAAATG
AACTCAAGTGCTGAGGTTCT

Product: ribulose-bisphosphate carboxylase

Products: NA

Alternate protein names: RuBisCO small subunit [H]

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MAIQAYHLTKKYETFSYLPQMTPEQVRRQIAYALAQGWNPAVEHAVKGTSAKESFWHMWKLPMFGEQSVDAVLAEIEACH
REFPDQMVRFIAYDNYSQSQGVAFVVYR

Sequences:

>Translated_108_residues
MAIQAYHLTKKYETFSYLPQMTPEQVRRQIAYALAQGWNPAVEHAVKGTSAKESFWHMWKLPMFGEQSVDAVLAEIEACH
REFPDQMVRFIAYDNYSQSQGVAFVVYR
>Mature_107_residues
AIQAYHLTKKYETFSYLPQMTPEQVRRQIAYALAQGWNPAVEHAVKGTSAKESFWHMWKLPMFGEQSVDAVLAEIEACHR
EFPDQMVRFIAYDNYSQSQGVAFVVYR

Specific function: RuBisCO catalyzes two reactions:the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the

COG id: COG4451

COG function: function code C; Ribulose bisphosphate carboxylase small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO small chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000894 [H]

Pfam domain/function: PF00101 RuBisCO_small [H]

EC number: =4.1.1.39 [H]

Molecular weight: Translated: 12566; Mature: 12435

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQAYHLTKKYETFSYLPQMTPEQVRRQIAYALAQGWNPAVEHAVKGTSAKESFWHMWK
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHC
LPMFGEQSVDAVLAEIEACHREFPDQMVRFIAYDNYSQSQGVAFVVYR
CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
AIQAYHLTKKYETFSYLPQMTPEQVRRQIAYALAQGWNPAVEHAVKGTSAKESFWHMWK
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHC
LPMFGEQSVDAVLAEIEACHREFPDQMVRFIAYDNYSQSQGVAFVVYR
CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA