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The map label for this gene is recA

Identifier: 114330801

GI number: 114330801

Start: 807264

End: 808295

Strand: Direct

Name: recA

Synonym: Neut_0789

Alternate gene names: 114330801

Gene position: 807264-808295 (Clockwise)

Preceding gene: 114330798

Following gene: 114330802

Centisome position: 30.34

GC content: 48.16

Gene sequence:

>1032_bases
ATGGACGAAAACAAAAATAAGGCACTTACGGCTGCACTAGCGCAGATTGAAAAACAGTATGGCAAGGGCTCAATCATGCG
GCTTGGTGATAGCGATGTGGCTAAAGATATCCAGGTGGTATCTACCGGTTCGCTGAGTTTGGATATTGCACTGGGTGTGG
GCGGACTTCCGCGCGGGCGTATTATCGAGATTTACGGTCCGGAATCTTCAGGTAAAACTACCCTGACGCTGCAGGTGATA
GCAGAAATGCAAAAGCTTGGTGGAACAGCCGCTTTTATTGATGCAGAACATGCACTGGATCCACAGTATGCTCAAAAAAT
CGGCGTTAACGTACAGGAATTGCTGATTTCCCAGCCAGATAACGGTGAACAGGCGCTAGAGATCACGGATATGCTGGTTC
GATCCGGATCGGTTGATATTGTTGTAATCGATTCGGTTGCGGCACTGACGCCCCGCGCTGAAATAGAAGGAGAAATGGGC
GAGCCGCAGATGGGGTTGCAGGCAAGGTTAATGTCGCAGGCCTTGCGTAAGCTGACCGCCAATATCAAGCGCACCAACAC
CACGGTAATTTTTATCAATCAGATACGCATGAAAATTGGTGTGATGTTTGGTAATCCGGAAACAACCACGGGTGGTAATG
CGCTGAAATTTTATGCTTCCGTTCGCCTGGATATTCGTCGTACCGGATCAATTAAACGTGGTGAAGAAATAGTTGGTAAT
GAGACCCGTGTCAAGGTCGTTAAAAACAAGGTTGCCCCTCCCTTCAAACAGGCAGATTTCGCTATTTTGTACGGCGAAGG
CATCTCGCGCGAGAGCGAGATTATAGAACTGGGTGTGTTGCATAAACTGATCGAGAAAGCCGGCGCTTGGTATTCCTATA
ATGGTGAGAAAATCGGGCAGGGCAGAGATAATGTGCGTGACTACCTGAAAGAGCACAAGGATCTTGCACATGAGATTGAA
CAGAAAATACGTGCGGCAGTTGACCTTGCTGAAACAAATAACCGGACTGTTCCACCTTCTCCCAGCGAATAA

Upstream 100 bases:

>100_bases
TTTGGGGGCATTTAGCGCGTCGGCATAGCAGTTGATGCTGGATGGCGTTTTTTACAGATTGAATATGCGATAATTTCAGC
TGTCTTTTTCGGGGATAGCT

Downstream 100 bases:

>100_bases
AGATGAATTTATATACGCGCGCGCTGGGATATCTTGCCCGACGGGAGTATTCGCGGCAGGAGCTGGAAAGAAAGCTATCG
CGCCATGAGTGCACACTTGC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MDENKNKALTAALAQIEKQYGKGSIMRLGDSDVAKDIQVVSTGSLSLDIALGVGGLPRGRIIEIYGPESSGKTTLTLQVI
AEMQKLGGTAAFIDAEHALDPQYAQKIGVNVQELLISQPDNGEQALEITDMLVRSGSVDIVVIDSVAALTPRAEIEGEMG
EPQMGLQARLMSQALRKLTANIKRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKRGEEIVGN
ETRVKVVKNKVAPPFKQADFAILYGEGISRESEIIELGVLHKLIEKAGAWYSYNGEKIGQGRDNVRDYLKEHKDLAHEIE
QKIRAAVDLAETNNRTVPPSPSE

Sequences:

>Translated_343_residues
MDENKNKALTAALAQIEKQYGKGSIMRLGDSDVAKDIQVVSTGSLSLDIALGVGGLPRGRIIEIYGPESSGKTTLTLQVI
AEMQKLGGTAAFIDAEHALDPQYAQKIGVNVQELLISQPDNGEQALEITDMLVRSGSVDIVVIDSVAALTPRAEIEGEMG
EPQMGLQARLMSQALRKLTANIKRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKRGEEIVGN
ETRVKVVKNKVAPPFKQADFAILYGEGISRESEIIELGVLHKLIEKAGAWYSYNGEKIGQGRDNVRDYLKEHKDLAHEIE
QKIRAAVDLAETNNRTVPPSPSE
>Mature_343_residues
MDENKNKALTAALAQIEKQYGKGSIMRLGDSDVAKDIQVVSTGSLSLDIALGVGGLPRGRIIEIYGPESSGKTTLTLQVI
AEMQKLGGTAAFIDAEHALDPQYAQKIGVNVQELLISQPDNGEQALEITDMLVRSGSVDIVVIDSVAALTPRAEIEGEMG
EPQMGLQARLMSQALRKLTANIKRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKRGEEIVGN
ETRVKVVKNKVAPPFKQADFAILYGEGISRESEIIELGVLHKLIEKAGAWYSYNGEKIGQGRDNVRDYLKEHKDLAHEIE
QKIRAAVDLAETNNRTVPPSPSE

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=338, Percent_Identity=70.414201183432, Blast_Score=490, Evalue=1e-140,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_NITEC (Q0AHX4)

Other databases:

- EMBL:   CP000450
- RefSeq:   YP_747023.1
- ProteinModelPortal:   Q0AHX4
- SMR:   Q0AHX4
- STRING:   Q0AHX4
- GeneID:   4272978
- GenomeReviews:   CP000450_GR
- KEGG:   net:Neut_0789
- NMPDR:   fig|335283.3.peg.2364
- eggNOG:   COG0468
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- PhylomeDB:   Q0AHX4
- ProtClustDB:   PRK09354
- BioCyc:   NEUT335283:NEUT_0789-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37367; Mature: 37367

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDENKNKALTAALAQIEKQYGKGSIMRLGDSDVAKDIQVVSTGSLSLDIALGVGGLPRGR
CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCEEEEECCCEEEEEEECCCCCCCCC
IIEIYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYAQKIGVNVQELLISQPD
EEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECHHCCCHHHHHHHCCCHHHHHCCCCC
NGEQALEITDMLVRSGSVDIVVIDSVAALTPRAEIEGEMGEPQMGLQARLMSQALRKLTA
CCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHH
NIKRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKRGEEIVGN
HHEECCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHHCC
ETRVKVVKNKVAPPFKQADFAILYGEGISRESEIIELGVLHKLIEKAGAWYSYNGEKIGQ
CCEEEEEHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCC
GRDNVRDYLKEHKDLAHEIEQKIRAAVDLAETNNRTVPPSPSE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDENKNKALTAALAQIEKQYGKGSIMRLGDSDVAKDIQVVSTGSLSLDIALGVGGLPRGR
CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCEEEEECCCEEEEEEECCCCCCCCC
IIEIYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYAQKIGVNVQELLISQPD
EEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECHHCCCHHHHHHHCCCHHHHHCCCCC
NGEQALEITDMLVRSGSVDIVVIDSVAALTPRAEIEGEMGEPQMGLQARLMSQALRKLTA
CCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHH
NIKRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKRGEEIVGN
HHEECCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHHCC
ETRVKVVKNKVAPPFKQADFAILYGEGISRESEIIELGVLHKLIEKAGAWYSYNGEKIGQ
CCEEEEEHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCC
GRDNVRDYLKEHKDLAHEIEQKIRAAVDLAETNNRTVPPSPSE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA