Click here to switch to the map view.

The map label for this gene is 114330767

Identifier: 114330767

GI number: 114330767

Start: 772798

End: 773256

Strand: Reverse

Name: 114330767

Synonym: Neut_0754

Alternate gene names: NA

Gene position: 773256-772798 (Counterclockwise)

Preceding gene: 114330768

Following gene: 114330764

Centisome position: 29.06

GC content: 51.2

Gene sequence:

>459_bases
ATGTCATTGTTACTTATTGCTGCCTGCTCAGAGCAAACTGACACTCGCTCGGCAGGCAGCGCCTTAGATCGTATTTTGGG
CAGGGATATATCTCCGGAACAGATCACACGCGATTTTGACCCCGATCAAGTTGCACATGGCCAAACACTTTTCCAGAAAA
ACTGTGCGGTGTGTCACGGTCAGAATGCGGAAGGCACTCCGGATTGGCGCAAACCACTGGAAAATGGCAGATACCCACCA
CCACCACTGAATGGCACTGCACACGCCTGGCACCATTCCACCGAAGAACTGAAACGCTTTATACTAAACGGCGGCCCTCC
GGGAGAAGGTCGTATGCCTGGTTGGGAAGGGATCCTTACAGATCAGGAAATTGATGACATCCTGATCTGGATAAAATCCC
TGTGGCCGGATGAAGTCTATCAGGGCTGGTACACCAGAATCGAGAACAGGCCAAAATAG

Upstream 100 bases:

>100_bases
GGTCCGGGCAAATCACAGACAGATAAAATACCTGAAAATAATACAACCAAATCAATTCTAAGACTTAAATAACGTGATAC
CTGCAAGAGCCGTAGCGCTC

Downstream 100 bases:

>100_bases
TAGACGTAATACTGCTCAGCTATTTCATACCCTAGAGCATTTTTGGCTTACTTGTTTACATATCCACATGAAGCGAAGTA
GTTGGCACACTCCTCCGGAG

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome C; Cytochrome C Family Protein; Cytochrome C Subfamily; Cytochrome; CopJ Protein; Cytochrome C Class ICCytochrome C Class I

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSLLLIAACSEQTDTRSAGSALDRILGRDISPEQITRDFDPDQVAHGQTLFQKNCAVCHGQNAEGTPDWRKPLENGRYPP
PPLNGTAHAWHHSTEELKRFILNGGPPGEGRMPGWEGILTDQEIDDILIWIKSLWPDEVYQGWYTRIENRPK

Sequences:

>Translated_152_residues
MSLLLIAACSEQTDTRSAGSALDRILGRDISPEQITRDFDPDQVAHGQTLFQKNCAVCHGQNAEGTPDWRKPLENGRYPP
PPLNGTAHAWHHSTEELKRFILNGGPPGEGRMPGWEGILTDQEIDDILIWIKSLWPDEVYQGWYTRIENRPK
>Mature_151_residues
SLLLIAACSEQTDTRSAGSALDRILGRDISPEQITRDFDPDQVAHGQTLFQKNCAVCHGQNAEGTPDWRKPLENGRYPPP
PLNGTAHAWHHSTEELKRFILNGGPPGEGRMPGWEGILTDQEIDDILIWIKSLWPDEVYQGWYTRIENRPK

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17156; Mature: 17025

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLLIAACSEQTDTRSAGSALDRILGRDISPEQITRDFDPDQVAHGQTLFQKNCAVCHG
CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEC
QNAEGTPDWRKPLENGRYPPPPLNGTAHAWHHSTEELKRFILNGGPPGEGRMPGWEGILT
CCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
DQEIDDILIWIKSLWPDEVYQGWYTRIENRPK
CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLLLIAACSEQTDTRSAGSALDRILGRDISPEQITRDFDPDQVAHGQTLFQKNCAVCHG
CEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEC
QNAEGTPDWRKPLENGRYPPPPLNGTAHAWHHSTEELKRFILNGGPPGEGRMPGWEGILT
CCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
DQEIDDILIWIKSLWPDEVYQGWYTRIENRPK
CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA