| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is hxuC [H]
Identifier: 114330731
GI number: 114330731
Start: 722636
End: 724729
Strand: Reverse
Name: hxuC [H]
Synonym: Neut_0716
Alternate gene names: 114330731
Gene position: 724729-722636 (Counterclockwise)
Preceding gene: 114330732
Following gene: 114330728
Centisome position: 27.23
GC content: 50.14
Gene sequence:
>2094_bases ATGTCACCGAGATGCAAGCATTATCCAGCCGCACTCAACATTTTTTATTTTGCAATCATCATGGCTGTATCGATGCTTTC TAATGCTGTTCATGCACAGACAACATCAGCTGGCACAAAATCTGAAAGTAGGCTGGCTTCCGCTGACTTGAAGGAAATCA CCGTTACCGCTACCCGCACCAGTCGAAAGGTAAGCGAAGTGCCCGAATCAGTCAGTGTGGTCGATACCGAGCAGATACGG ACCCGGCAAGCAGCTGATATAGGAGATGTCCTCCGTTACCTGCCTAACGTTGAACTGGGTGGTGGGCCGCGCAATCTGGG CCTTAGTCCGGTCATGCGCGGCATGGGGGATGATCGCATCCTGTTCCTGCTGGATGGTGCCAGACAGGATTTCAACCGTG GTCACAATGCCCGCATCTTTACCGACCCTAGTCTGCTCAAGCGCGTGGATGTCATGCGCGGGCCGGCTTCCACCGTATGG GGCAGTGGCGCGCTCGGTGGCGTTATCTCCTTAACCACGCTGGATGCAACCGATCTGCTGCGTTCCGGTGAGCGTTTCGG CATGAAAGTTCGAGGGGGATTCCAGAGCATGAACGAGCAATATATTCCCGGCATCAGTGCTTACGGGCTGGTTGGAGAAC AATTCGATTATCTGCTTGATTTTTCCTACCGTAATGCAGCCGACGATATCCGTCACGGCGACGGCTCCAAACTACAAAAC TCCCGCTTTGAATCCTATGCCAGTCTGGCCAAATTTAACTGGACACCAGGCGATCATCGCTTCACATTTTCTGCACAAAC GTTCGATCAGGCCGGTAAAGTACCTTCCAACCCGCAAGCCGCTTCTACGGCCAACACACTGGTAGATCGGGATACCGAGC AGCGCAACTATACACTGCGCTATCGTTATGAAAATGTGGATAATGCCTGGCTCAATCCTGAAGTACTGGTCTACCACAAT ACTACCTACAGTCTCGAGAAACGGTTATTTGACCGGCGGCGCGATGAAACTGATTTCTCCACGACCGGCATCAATGCACG CAACAGCTCGCGCCTTGAGCTGAACAGTTTTACAACCCAATTAATTACCTATGGCGTTGATTATTTTCATAATGAAGCTA AAGGCAAACGCAATGGCGCCACACGACCGGAATTCCCCCGGGGCGAAGCAGATGTCGTTGGCCTGTATTTGCAGGATGAA ATCACGTTGTGGGAACGATTGTCACTCATTCCTGGTATACGTTGGGATTATTTCAGCAGTAAGGCAGATGGCATATCCGT CAGCTCCAATCAAAATGATCGCGTCAATTTCAAGCTTGGTGGACTGCTTAAGGTAACTGAATGGTTCTCAATCACTGGTG GCTACAGCGAAGCATTTCGCGCACCGACACTAGGCGAACTGTTTACGACCGGTACACATTTCACTTGTGGACCAAGGTGT TCCAATCTGTTTACCCCCAATCCCGATCTTAAACCGGAAACTGCCTTCAATAAGGAAATTGGCGCACGCATACAAAAATC GAATCTGCTGTTTGAAAACGATCAACTGACGATGCGCGGAACTTATTTCCATAATAAGGTTAAAAATTTCGTTGATCTGA TGGTTGATTTTGTCTTTCGCCCGGTTCCTGGCAACCCAGGCAGAGGCGGCACCACAACCAGTGACAATGTACATGATGCC CTGCTGAAAGGATTCGAAATAGAGACCAGCTATGCGGCGAAATATAGCTACACCGGCTTCTCCTACGCTCAGACCCGGGG TCACAACCGGACGAGTGGCGGGGTATTGTCCAATGTTCAGCCAGATAAATGGATTGTAATGGCCGGGTTAAATTGGCCAA CTCATGATCTTTCCCTGGGCTGGCGCAGCAGTATTGTCAGTGCACAACATCGTGTACCAACAGGTGGAACCCCGACACCT GGCTATACACTGCATGATCTAACATTAACCTGGCTGCCACAAAACGGCCCGGCTAAAGGGTTACGTTTTGATTTTGGAAT CGACAATCTGACTGACAAGGATTATCGCCGTCACCTCAACGTGTTGAAAGATCCGGGACGCAACTACAAACTGGCTGTTT CATATCAATTCTGA
Upstream 100 bases:
>100_bases CTAAAAACATTACCGTGGCAACAAAAACCGCTGTTCCAGCCAGCCAGCCAGCACTACGCCAGCCAGCCAGAAATTACTCA TTTCTGGAGGAAGTATTTTT
Downstream 100 bases:
>100_bases TTCGTGCTATCCAGCTTTGTTCATGTAGGGACTTGAATCTGAATTGTGTGGCAGGTTACAGCAGCTGTTCAATATCACTG GCCGGTGATTCCGGCTTATC
Product: TonB-dependent heme/hemoglobin receptor family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MSPRCKHYPAALNIFYFAIIMAVSMLSNAVHAQTTSAGTKSESRLASADLKEITVTATRTSRKVSEVPESVSVVDTEQIR TRQAADIGDVLRYLPNVELGGGPRNLGLSPVMRGMGDDRILFLLDGARQDFNRGHNARIFTDPSLLKRVDVMRGPASTVW GSGALGGVISLTTLDATDLLRSGERFGMKVRGGFQSMNEQYIPGISAYGLVGEQFDYLLDFSYRNAADDIRHGDGSKLQN SRFESYASLAKFNWTPGDHRFTFSAQTFDQAGKVPSNPQAASTANTLVDRDTEQRNYTLRYRYENVDNAWLNPEVLVYHN TTYSLEKRLFDRRRDETDFSTTGINARNSSRLELNSFTTQLITYGVDYFHNEAKGKRNGATRPEFPRGEADVVGLYLQDE ITLWERLSLIPGIRWDYFSSKADGISVSSNQNDRVNFKLGGLLKVTEWFSITGGYSEAFRAPTLGELFTTGTHFTCGPRC SNLFTPNPDLKPETAFNKEIGARIQKSNLLFENDQLTMRGTYFHNKVKNFVDLMVDFVFRPVPGNPGRGGTTTSDNVHDA LLKGFEIETSYAAKYSYTGFSYAQTRGHNRTSGGVLSNVQPDKWIVMAGLNWPTHDLSLGWRSSIVSAQHRVPTGGTPTP GYTLHDLTLTWLPQNGPAKGLRFDFGIDNLTDKDYRRHLNVLKDPGRNYKLAVSYQF
Sequences:
>Translated_697_residues MSPRCKHYPAALNIFYFAIIMAVSMLSNAVHAQTTSAGTKSESRLASADLKEITVTATRTSRKVSEVPESVSVVDTEQIR TRQAADIGDVLRYLPNVELGGGPRNLGLSPVMRGMGDDRILFLLDGARQDFNRGHNARIFTDPSLLKRVDVMRGPASTVW GSGALGGVISLTTLDATDLLRSGERFGMKVRGGFQSMNEQYIPGISAYGLVGEQFDYLLDFSYRNAADDIRHGDGSKLQN SRFESYASLAKFNWTPGDHRFTFSAQTFDQAGKVPSNPQAASTANTLVDRDTEQRNYTLRYRYENVDNAWLNPEVLVYHN TTYSLEKRLFDRRRDETDFSTTGINARNSSRLELNSFTTQLITYGVDYFHNEAKGKRNGATRPEFPRGEADVVGLYLQDE ITLWERLSLIPGIRWDYFSSKADGISVSSNQNDRVNFKLGGLLKVTEWFSITGGYSEAFRAPTLGELFTTGTHFTCGPRC SNLFTPNPDLKPETAFNKEIGARIQKSNLLFENDQLTMRGTYFHNKVKNFVDLMVDFVFRPVPGNPGRGGTTTSDNVHDA LLKGFEIETSYAAKYSYTGFSYAQTRGHNRTSGGVLSNVQPDKWIVMAGLNWPTHDLSLGWRSSIVSAQHRVPTGGTPTP GYTLHDLTLTWLPQNGPAKGLRFDFGIDNLTDKDYRRHLNVLKDPGRNYKLAVSYQF >Mature_696_residues SPRCKHYPAALNIFYFAIIMAVSMLSNAVHAQTTSAGTKSESRLASADLKEITVTATRTSRKVSEVPESVSVVDTEQIRT RQAADIGDVLRYLPNVELGGGPRNLGLSPVMRGMGDDRILFLLDGARQDFNRGHNARIFTDPSLLKRVDVMRGPASTVWG SGALGGVISLTTLDATDLLRSGERFGMKVRGGFQSMNEQYIPGISAYGLVGEQFDYLLDFSYRNAADDIRHGDGSKLQNS RFESYASLAKFNWTPGDHRFTFSAQTFDQAGKVPSNPQAASTANTLVDRDTEQRNYTLRYRYENVDNAWLNPEVLVYHNT TYSLEKRLFDRRRDETDFSTTGINARNSSRLELNSFTTQLITYGVDYFHNEAKGKRNGATRPEFPRGEADVVGLYLQDEI TLWERLSLIPGIRWDYFSSKADGISVSSNQNDRVNFKLGGLLKVTEWFSITGGYSEAFRAPTLGELFTTGTHFTCGPRCS NLFTPNPDLKPETAFNKEIGARIQKSNLLFENDQLTMRGTYFHNKVKNFVDLMVDFVFRPVPGNPGRGGTTTSDNVHDAL LKGFEIETSYAAKYSYTGFSYAQTRGHNRTSGGVLSNVQPDKWIVMAGLNWPTHDLSLGWRSSIVSAQHRVPTGGTPTPG YTLHDLTLTWLPQNGPAKGLRFDFGIDNLTDKDYRRHLNVLKDPGRNYKLAVSYQF
Specific function: Required for utilization of free heme at low concentrations [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=715, Percent_Identity=23.2167832167832, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1786798, Length=747, Percent_Identity=23.2931726907631, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1790405, Length=160, Percent_Identity=32.5, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786344, Length=269, Percent_Identity=24.5353159851301, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR011276 - InterPro: IPR010949 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77845; Mature: 77714
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRCKHYPAALNIFYFAIIMAVSMLSNAVHAQTTSAGTKSESRLASADLKEITVTATRT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECCC SRKVSEVPESVSVVDTEQIRTRQAADIGDVLRYLPNVELGGGPRNLGLSPVMRGMGDDRI HHHHHHCCCCCEEEEHHHHHHHHHCCHHHHHHHCCCCEECCCCCCCCHHHHHHCCCCCEE LFLLDGARQDFNRGHNARIFTDPSLLKRVDVMRGPASTVWGSGALGGVISLTTLDATDLL EEEECCCHHHHCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHH RSGERFGMKVRGGFQSMNEQYIPGISAYGLVGEQFDYLLDFSYRNAADDIRHGDGSKLQN HCCHHCCEEEECCHHHCCHHCCCCCHHHCCCHHHHHHHEECCCCCCHHHHCCCCCCCHHH SRFESYASLAKFNWTPGDHRFTFSAQTFDQAGKVPSNPQAASTANTLVDRDTEQRNYTLR HHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEE YRYENVDNAWLNPEVLVYHNTTYSLEKRLFDRRRDETDFSTTGINARNSSRLELNSFTTQ EEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHH LITYGVDYFHNEAKGKRNGATRPEFPRGEADVVGLYLQDEITLWERLSLIPGIRWDYFSS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCC KADGISVSSNQNDRVNFKLGGLLKVTEWFSITGGYSEAFRAPTLGELFTTGTHFTCGPRC CCCCEEECCCCCCEEEEEECCEEEEEEEEEECCCHHHHHCCCCHHHHHHCCCCEECCCCC SNLFTPNPDLKPETAFNKEIGARIQKSNLLFENDQLTMRGTYFHNKVKNFVDLMVDFVFR CCCCCCCCCCCCCCHHCHHHHCEEECCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHEE PVPGNPGRGGTTTSDNVHDALLKGFEIETSYAAKYSYTGFSYAQTRGHNRTSGGVLSNVQ CCCCCCCCCCCCCCCCHHHHHHCCCEEECCEEEEEECCCCHHHHHCCCCCCCCCCCCCCC PDKWIVMAGLNWPTHDLSLGWRSSIVSAQHRVPTGGTPTPGYTLHDLTLTWLPQNGPAKG CCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCC LRFDFGIDNLTDKDYRRHLNVLKDPGRNYKLAVSYQF CEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECC >Mature Secondary Structure SPRCKHYPAALNIFYFAIIMAVSMLSNAVHAQTTSAGTKSESRLASADLKEITVTATRT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECCC SRKVSEVPESVSVVDTEQIRTRQAADIGDVLRYLPNVELGGGPRNLGLSPVMRGMGDDRI HHHHHHCCCCCEEEEHHHHHHHHHCCHHHHHHHCCCCEECCCCCCCCHHHHHHCCCCCEE LFLLDGARQDFNRGHNARIFTDPSLLKRVDVMRGPASTVWGSGALGGVISLTTLDATDLL EEEECCCHHHHCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHH RSGERFGMKVRGGFQSMNEQYIPGISAYGLVGEQFDYLLDFSYRNAADDIRHGDGSKLQN HCCHHCCEEEECCHHHCCHHCCCCCHHHCCCHHHHHHHEECCCCCCHHHHCCCCCCCHHH SRFESYASLAKFNWTPGDHRFTFSAQTFDQAGKVPSNPQAASTANTLVDRDTEQRNYTLR HHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEE YRYENVDNAWLNPEVLVYHNTTYSLEKRLFDRRRDETDFSTTGINARNSSRLELNSFTTQ EEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHH LITYGVDYFHNEAKGKRNGATRPEFPRGEADVVGLYLQDEITLWERLSLIPGIRWDYFSS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCC KADGISVSSNQNDRVNFKLGGLLKVTEWFSITGGYSEAFRAPTLGELFTTGTHFTCGPRC CCCCEEECCCCCCEEEEEECCEEEEEEEEEECCCHHHHHCCCCHHHHHHCCCCEECCCCC SNLFTPNPDLKPETAFNKEIGARIQKSNLLFENDQLTMRGTYFHNKVKNFVDLMVDFVFR CCCCCCCCCCCCCCHHCHHHHCEEECCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHEE PVPGNPGRGGTTTSDNVHDALLKGFEIETSYAAKYSYTGFSYAQTRGHNRTSGGVLSNVQ CCCCCCCCCCCCCCCCHHHHHHCCCEEECCEEEEEECCCCHHHHHCCCCCCCCCCCCCCC PDKWIVMAGLNWPTHDLSLGWRSSIVSAQHRVPTGGTPTPGYTLHDLTLTWLPQNGPAKG CCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCC LRFDFGIDNLTDKDYRRHLNVLKDPGRNYKLAVSYQF CEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7751272 [H]