Click here to switch to the map view.

The map label for this gene is cyoD [H]

Identifier: 114330709

GI number: 114330709

Start: 698614

End: 698964

Strand: Reverse

Name: cyoD [H]

Synonym: Neut_0694

Alternate gene names: 114330709

Gene position: 698964-698614 (Counterclockwise)

Preceding gene: 114330710

Following gene: 114330708

Centisome position: 26.27

GC content: 53.28

Gene sequence:

>351_bases
ATGAGTGAACCTATTGTTACCCGGACATCCGCGACCAACGCGCTCAGGGCCAATGAGCGGCGTGATTTCATGTCTTACAT
GTGGGGGTTTGGTCTAGCGCTTGGCCTCACGCTGGTACCCTTTGCGCTGGTACAGTGGCAAGCCATGGCACGTGACCCGT
TGTTAATAACTATCGCGGTGCTGGCATTGGTGCAGACCGTGGTGCACTTTCGCTACTTCCTGCACCTTGACCGCAAACGC
AAGCGTGAGGATCTGTTATTGGTCCTGTTTTCTACTTCGCTGTTGATCATCATGGTGGCTGGCACCATCTGGATTATGGC
TAATCTTGCTGAGCGCATGACACCCATATAG

Upstream 100 bases:

>100_bases
GCGAGACCAAGCTGGGGCTACTCAGATTGGCACTGTTCTGGCATTTTCTGGACATTGTCTGGATCTTTATTTTTTCAGTA
GTTTATCTGGCGGGATTGGC

Downstream 100 bases:

>100_bases
CAGTCGATTGTCATGCAGGCCTACTATTTGCTTGTCGATAACAACTGTCTCTCACACTTCAATAGCAACGCCGGTGAAAA
CTGTTCCTGCCAAGCAATAG

Product: cytochrome C oxidase subunit IV

Products: Ubiquinone-8; H2O [C]

Alternate protein names: Cytochrome o ubiquinol oxidase subunit IV [H]

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSEPIVTRTSATNALRANERRDFMSYMWGFGLALGLTLVPFALVQWQAMARDPLLITIAVLALVQTVVHFRYFLHLDRKR
KREDLLLVLFSTSLLIIMVAGTIWIMANLAERMTPI

Sequences:

>Translated_116_residues
MSEPIVTRTSATNALRANERRDFMSYMWGFGLALGLTLVPFALVQWQAMARDPLLITIAVLALVQTVVHFRYFLHLDRKR
KREDLLLVLFSTSLLIIMVAGTIWIMANLAERMTPI
>Mature_115_residues
SEPIVTRTSATNALRANERRDFMSYMWGFGLALGLTLVPFALVQWQAMARDPLLITIAVLALVQTVVHFRYFLHLDRKRK
REDLLLVLFSTSLLIIMVAGTIWIMANLAERMTPI

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: NA

Molecular weight: Translated: 13263; Mature: 13132

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPIVTRTSATNALRANERRDFMSYMWGFGLALGLTLVPFALVQWQAMARDPLLITIAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LALVQTVVHFRYFLHLDRKRKREDLLLVLFSTSLLIIMVAGTIWIMANLAERMTPI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEPIVTRTSATNALRANERRDFMSYMWGFGLALGLTLVPFALVQWQAMARDPLLITIAV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LALVQTVVHFRYFLHLDRKRKREDLLLVLFSTSLLIIMVAGTIWIMANLAERMTPI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]