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The map label for this gene is tex [H]

Identifier: 114330679

GI number: 114330679

Start: 673155

End: 675377

Strand: Direct

Name: tex [H]

Synonym: Neut_0664

Alternate gene names: 114330679

Gene position: 673155-675377 (Clockwise)

Preceding gene: 114330677

Following gene: 114330682

Centisome position: 25.3

GC content: 52.0

Gene sequence:

>2223_bases
ATGACTTCTTCAACAATATCAGCAGTTTCAGAAGCAGTACAAAGAAAGATTATCAACGCCATTGCGACAGAGCTCAGTGT
TGCGCCACAGCAGGTCAGCGCAGCGGTAGCCTTGCTGGATGATGGCGCAACCGTGCCTTTTATCGCGCGATACCGTAAGG
AAGCAACGGGCAATCTGGACGATACACAACTGCGTCTGCTGGAAGAACGATTGATCTATCTGCGCGAGCTGGAAGAACGG
CGGCAGGTCATCCTGACCTCGATTGGGGAGCAGGGAAAACTCTCCGATGAATTGCGCTACATAATCGAACAAGCTGCAAC
CAAGCAGCTGCTGGAAGATATTTATTTGCCCTACAAACCGAAGCGTCGAACACGGGCACAGATCGCGCGTGAGGCCGGGC
TGGAACCCTTGGCAGACACTCTTCTGACAGATCCGACGTGCGACCCAGAACAGGAAGCCGCAAACTATATCAAGGTGGTG
TCAGCAGCCGAAGGAGTAGAGGCAATCAATGTTCCCGATGTAAAAACAGCACTGGAAGGTGCGCGTGATATTCTGGCTGA
ACGTTTTGCGGAGACAGCGAAGCTGCTCGCCATTCTGCGCAATAAACTTTGGCAGGAAGGCGTGGTGACTTCAGTGGTTG
TTGCCGGTCAGGAAATGTCGGAGGAAGAAAAATTCCGTGATTACTATGCTTATGCCGAGCCAGTGCGCTTGATTCCCTCA
CACCGCGCGCTGGCATTGTTCCGTGGCCGGGCACTGGGAGTGCTTAGAATTGATCTGGACCTGGATGAAACTTCTCGTGA
AGTAATTCCACATCCTTGTGTTGCCATGATTGCTGCACATTTCAAAATCGAAAATCGTGGCCGGAAAGCGGATAAATGGT
TGGGGGATGTTTGTCAGTGGGCCTGGCGTGTCAAAGTGCATCCGCATCTCACTGCGGAACTGTTGTTGCAGGTGCGCGAG
GCAGCAGAAACTGAAGCAATCAGGATTTTTAGCCGCAACCTGCGTGAATTGCTGCTAGCCGCTCCGGCGGGGCCCAAAGC
TGTACTCGGGCTTGATCCGGGTTATCGTACTGGCTGTAAAGTGGCTGTGGTCGATGCCACTGGGAAATTGCTGGAAACGA
CGACGATTTATCCGCATCAGCCACAAAGTAACTGGCAGGGTTCACTGGCAAGCATCGTGCAACTGGTGCTCCGGCATGGT
GTTGAGCTGATTTCAATTGGGAACGGGACAGCGAGCCGGGAAACCGATAAATTAGCCACCGAGGTCATTCGGCTGGTGGC
AGAGCAACACCCCGAATTGAAGTTGATCAAGCTTGTTGTCAGTGAAGCAGGTGCCTCGGTTTATTCAGCTTCTGCACTGG
CTGCTGCAGAATTTTCCAATCTGGACGTAAGCTTGCGCGGCGCGGTTTCCATTGCCAGACGTCTGCAAGATCCGCTGGCA
GAACTGGTCAAGATCGAACCCAAATCAATCGGTGTTGGTCAGTATCAGCATGATGTAAACCAACGTACTCTGGCGCGATC
ACTGGCTGCTACGGTTGAGGATTGTGTTAATGCGGTTGGTGTGGATGTCAATACCGCATCAGCACCTCTGTTAGCACAAG
TTTCCGGCCTTAATCGCGTACTTGCCCAGAATATCGTCAGCTATCGCGATGCTCATGGTCGGTTTCCAAATCGGCGAACG
ATTCTCAAAGTGCCGCGTGTGGGTGAAAAAACATTTGAGCAGGCAGCGGGCTTTCTGCGCATCAACGACGGGGATAATCC
ATTGGATCGTTCCGCTGTTCACCCGGAAGCCTATCCGGTGGTGGAGCGCATTCTGGCGCGTTTGAGTAAAGGAATCGGGC
AGGTAATGGGGCATCCGGAAACACTCAAAGGGCTTACTGCTGAAGAATTTACCGATGAAACCTTCGGTTTGCCAACTGTG
CGCGATATTCTGTCCGAGCTGGAAAAGCCTGGCCGTGATCCGCGCCCGGAATTTAAAACCGCTACCTTTCAAGAAGGGAT
TGAATCACTGACTGATCTGCAATCCGGCATGATTCTGGAAGGCGTTGTGACTAACGTGGCTGCGTTTGGAGCATTTGTTG
ATATTGGCGTGCATCAGGATGGTCTGGTGCACGTTTCCTCACTGGCAAACAAGTTCATCAAGGATCCCCACTCGATTGTA
AACAAGCACACAAAACCCTTTAGTGACAACAATTTGCAAGAACTATCAGGCTCAGTGCCATGA

Upstream 100 bases:

>100_bases
TTCGCTACAGAATATATGTTGCTGAATGATATATCCTGGCTGAACGGTTTCCAAAGCTTTCCTGGCCGATTTTCCGGTTC
CTTTCTTCTCCATCAGCGCT

Downstream 100 bases:

>100_bases
AAAATACCATGACCAGATCATGAGGTTGAACACGGCTTGCGCCGGCAGCGTTCACGCTCCTGGTCGGCGATCTCGCCCGG
CTGCAATGCTAGCTCAGCAT

Product: RNA-binding S1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 740; Mature: 739

Protein sequence:

>740_residues
MTSSTISAVSEAVQRKIINAIATELSVAPQQVSAAVALLDDGATVPFIARYRKEATGNLDDTQLRLLEERLIYLRELEER
RQVILTSIGEQGKLSDELRYIIEQAATKQLLEDIYLPYKPKRRTRAQIAREAGLEPLADTLLTDPTCDPEQEAANYIKVV
SAAEGVEAINVPDVKTALEGARDILAERFAETAKLLAILRNKLWQEGVVTSVVVAGQEMSEEEKFRDYYAYAEPVRLIPS
HRALALFRGRALGVLRIDLDLDETSREVIPHPCVAMIAAHFKIENRGRKADKWLGDVCQWAWRVKVHPHLTAELLLQVRE
AAETEAIRIFSRNLRELLLAAPAGPKAVLGLDPGYRTGCKVAVVDATGKLLETTTIYPHQPQSNWQGSLASIVQLVLRHG
VELISIGNGTASRETDKLATEVIRLVAEQHPELKLIKLVVSEAGASVYSASALAAAEFSNLDVSLRGAVSIARRLQDPLA
ELVKIEPKSIGVGQYQHDVNQRTLARSLAATVEDCVNAVGVDVNTASAPLLAQVSGLNRVLAQNIVSYRDAHGRFPNRRT
ILKVPRVGEKTFEQAAGFLRINDGDNPLDRSAVHPEAYPVVERILARLSKGIGQVMGHPETLKGLTAEEFTDETFGLPTV
RDILSELEKPGRDPRPEFKTATFQEGIESLTDLQSGMILEGVVTNVAAFGAFVDIGVHQDGLVHVSSLANKFIKDPHSIV
NKHTKPFSDNNLQELSGSVP

Sequences:

>Translated_740_residues
MTSSTISAVSEAVQRKIINAIATELSVAPQQVSAAVALLDDGATVPFIARYRKEATGNLDDTQLRLLEERLIYLRELEER
RQVILTSIGEQGKLSDELRYIIEQAATKQLLEDIYLPYKPKRRTRAQIAREAGLEPLADTLLTDPTCDPEQEAANYIKVV
SAAEGVEAINVPDVKTALEGARDILAERFAETAKLLAILRNKLWQEGVVTSVVVAGQEMSEEEKFRDYYAYAEPVRLIPS
HRALALFRGRALGVLRIDLDLDETSREVIPHPCVAMIAAHFKIENRGRKADKWLGDVCQWAWRVKVHPHLTAELLLQVRE
AAETEAIRIFSRNLRELLLAAPAGPKAVLGLDPGYRTGCKVAVVDATGKLLETTTIYPHQPQSNWQGSLASIVQLVLRHG
VELISIGNGTASRETDKLATEVIRLVAEQHPELKLIKLVVSEAGASVYSASALAAAEFSNLDVSLRGAVSIARRLQDPLA
ELVKIEPKSIGVGQYQHDVNQRTLARSLAATVEDCVNAVGVDVNTASAPLLAQVSGLNRVLAQNIVSYRDAHGRFPNRRT
ILKVPRVGEKTFEQAAGFLRINDGDNPLDRSAVHPEAYPVVERILARLSKGIGQVMGHPETLKGLTAEEFTDETFGLPTV
RDILSELEKPGRDPRPEFKTATFQEGIESLTDLQSGMILEGVVTNVAAFGAFVDIGVHQDGLVHVSSLANKFIKDPHSIV
NKHTKPFSDNNLQELSGSVP
>Mature_739_residues
TSSTISAVSEAVQRKIINAIATELSVAPQQVSAAVALLDDGATVPFIARYRKEATGNLDDTQLRLLEERLIYLRELEERR
QVILTSIGEQGKLSDELRYIIEQAATKQLLEDIYLPYKPKRRTRAQIAREAGLEPLADTLLTDPTCDPEQEAANYIKVVS
AAEGVEAINVPDVKTALEGARDILAERFAETAKLLAILRNKLWQEGVVTSVVVAGQEMSEEEKFRDYYAYAEPVRLIPSH
RALALFRGRALGVLRIDLDLDETSREVIPHPCVAMIAAHFKIENRGRKADKWLGDVCQWAWRVKVHPHLTAELLLQVREA
AETEAIRIFSRNLRELLLAAPAGPKAVLGLDPGYRTGCKVAVVDATGKLLETTTIYPHQPQSNWQGSLASIVQLVLRHGV
ELISIGNGTASRETDKLATEVIRLVAEQHPELKLIKLVVSEAGASVYSASALAAAEFSNLDVSLRGAVSIARRLQDPLAE
LVKIEPKSIGVGQYQHDVNQRTLARSLAATVEDCVNAVGVDVNTASAPLLAQVSGLNRVLAQNIVSYRDAHGRFPNRRTI
LKVPRVGEKTFEQAAGFLRINDGDNPLDRSAVHPEAYPVVERILARLSKGIGQVMGHPETLKGLTAEEFTDETFGLPTVR
DILSELEKPGRDPRPEFKTATFQEGIESLTDLQSGMILEGVVTNVAAFGAFVDIGVHQDGLVHVSSLANKFIKDPHSIVN
KHTKPFSDNNLQELSGSVP

Specific function: Transcription accessory protein. Exact function not known [H]

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=771, Percent_Identity=32.9442282749676, Blast_Score=373, Evalue=1e-103,
Organism=Homo sapiens, GI27597090, Length=650, Percent_Identity=23.5384615384615, Blast_Score=86, Evalue=2e-16,
Organism=Escherichia coli, GI87082262, Length=704, Percent_Identity=61.9318181818182, Blast_Score=842, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17511129, Length=731, Percent_Identity=29.4117647058824, Blast_Score=241, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17552892, Length=260, Percent_Identity=27.3076923076923, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI62484314, Length=745, Percent_Identity=31.9463087248322, Blast_Score=337, Evalue=2e-92,
Organism=Drosophila melanogaster, GI24640080, Length=473, Percent_Identity=21.9873150105708, Blast_Score=74, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 81078; Mature: 80946

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSTISAVSEAVQRKIINAIATELSVAPQQVSAAVALLDDGATVPFIARYRKEATGNLD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
DTQLRLLEERLIYLRELEERRQVILTSIGEQGKLSDELRYIIEQAATKQLLEDIYLPYKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
KRRTRAQIAREAGLEPLADTLLTDPTCDPEQEAANYIKVVSAAEGVEAINVPDVKTALEG
CHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
ARDILAERFAETAKLLAILRNKLWQEGVVTSVVVAGQEMSEEEKFRDYYAYAEPVRLIPS
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHCCC
HRALALFRGRALGVLRIDLDLDETSREVIPHPCVAMIAAHFKIENRGRKADKWLGDVCQW
CHHHHHHCCCEEEEEEEEECCCCCCHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AWRVKVHPHLTAELLLQVREAAETEAIRIFSRNLRELLLAAPAGPKAVLGLDPGYRTGCK
HHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCE
VAVVDATGKLLETTTIYPHQPQSNWQGSLASIVQLVLRHGVELISIGNGTASRETDKLAT
EEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH
EVIRLVAEQHPELKLIKLVVSEAGASVYSASALAAAEFSNLDVSLRGAVSIARRLQDPLA
HHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
ELVKIEPKSIGVGQYQHDVNQRTLARSLAATVEDCVNAVGVDVNTASAPLLAQVSGLNRV
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LAQNIVSYRDAHGRFPNRRTILKVPRVGEKTFEQAAGFLRINDGDNPLDRSAVHPEAYPV
HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHH
VERILARLSKGIGQVMGHPETLKGLTAEEFTDETFGLPTVRDILSELEKPGRDPRPEFKT
HHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCH
ATFQEGIESLTDLQSGMILEGVVTNVAAFGAFVDIGVHQDGLVHVSSLANKFIKDPHSIV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCHHHHH
NKHTKPFSDNNLQELSGSVP
HCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
TSSTISAVSEAVQRKIINAIATELSVAPQQVSAAVALLDDGATVPFIARYRKEATGNLD
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
DTQLRLLEERLIYLRELEERRQVILTSIGEQGKLSDELRYIIEQAATKQLLEDIYLPYKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
KRRTRAQIAREAGLEPLADTLLTDPTCDPEQEAANYIKVVSAAEGVEAINVPDVKTALEG
CHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
ARDILAERFAETAKLLAILRNKLWQEGVVTSVVVAGQEMSEEEKFRDYYAYAEPVRLIPS
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHCCC
HRALALFRGRALGVLRIDLDLDETSREVIPHPCVAMIAAHFKIENRGRKADKWLGDVCQW
CHHHHHHCCCEEEEEEEEECCCCCCHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AWRVKVHPHLTAELLLQVREAAETEAIRIFSRNLRELLLAAPAGPKAVLGLDPGYRTGCK
HHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCE
VAVVDATGKLLETTTIYPHQPQSNWQGSLASIVQLVLRHGVELISIGNGTASRETDKLAT
EEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHH
EVIRLVAEQHPELKLIKLVVSEAGASVYSASALAAAEFSNLDVSLRGAVSIARRLQDPLA
HHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
ELVKIEPKSIGVGQYQHDVNQRTLARSLAATVEDCVNAVGVDVNTASAPLLAQVSGLNRV
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LAQNIVSYRDAHGRFPNRRTILKVPRVGEKTFEQAAGFLRINDGDNPLDRSAVHPEAYPV
HHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHH
VERILARLSKGIGQVMGHPETLKGLTAEEFTDETFGLPTVRDILSELEKPGRDPRPEFKT
HHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCH
ATFQEGIESLTDLQSGMILEGVVTNVAAFGAFVDIGVHQDGLVHVSSLANKFIKDPHSIV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCHHHHH
NKHTKPFSDNNLQELSGSVP
HCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755871; 12910271 [H]