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The map label for this gene is yjbJ [H]

Identifier: 114330658

GI number: 114330658

Start: 654368

End: 655270

Strand: Direct

Name: yjbJ [H]

Synonym: Neut_0643

Alternate gene names: 114330658

Gene position: 654368-655270 (Clockwise)

Preceding gene: 114330657

Following gene: 114330665

Centisome position: 24.59

GC content: 50.06

Gene sequence:

>903_bases
ATGCACATCTTCCAAAAATGGCGGTGGGTTGTGTTGAGTTTTTTAGCTCTGCATGCTGCTGTCACTTACAGCAGTGAACC
TGTTCCCCGGGGAATACCCGGTAATGTTGCAAACAATATCGAAATATTGGTGCTGCAGGCTCGTCAATACGAACATGGCG
AGGGCGTGCCGCAAGATAGAAAAAAAGCGGTGGAATTGTACTGTCAGGCAGCCAGACTGGGTTCGGCGGAGGGGCAATAT
GCACTGGGATGGATGTATGCCAATGGGCGTGGTGTTGAGCGTAATGACAGCATTGCTGCCAGTCTGTTTGAAATGGCCGC
CGCCCGGGGGCATACCTATGCACAGAAAATGCTGCAGTTTATGCCTGTGCCGGCCAATCCAAAGATACAGTTACCGGATT
GCCTGAACAAAAATATTTATGCTCGCGCCAAGGCAACGCCAAACAAATATTACGTTAACCAATCCGTGTCTGTACTTGTG
GAGAAACTGGCACCACAATACGAGATAGATCCTGGTCTTGTGCTGGCGGTTATTTCGGTTGAATCCGGTTTTAATGTGCA
GGCAGTTTCACCCAGGAATGCTCAGGGATTGATGCAACTGATCCCGGAAACAGCAGAGAGGTTTCAGGTCAAGGATGCTT
TTGATGCAGAAGACAATATCAAGGGGGGCATGGCTTATCTGAGATGGCTGCTCGCTTTCTTCAAGGGAGATGTGGCGCTG
GTTGCTGCGGCATACAATGCCGGGGAGGGGGCGGTCGAGAAATATCGCGGCATTCCGCCTTATCCAGAAACTGTAAAATA
TGTCAACAAAATCTTGTCGCGCTACAACAAAACTACTCATCCGTATCAGCCCGGCGTGGTCAGCAGAGCTTCCTTCATCT
TCACCTCGGTTGCAGCTGAGTAA

Upstream 100 bases:

>100_bases
GTTCGCGGTATACACCTTGCGATCATCGCAATTTTACCAGCAGCGCGGCTCATGGAGAATTCGTACAGAGGCTCCTTAAC
TATCCAAGCAGAAGAGAAAT

Downstream 100 bases:

>100_bases
TGAGACGTTGGCCATCTCGCAAAACAAATTTCCATCACTTGTAAACATCCGTAAAAGCAATTGGCTTTGTGAACACCGCA
GGCGTGAAGCAATCCAGCAA

Product: lytic transglycosylase, catalytic

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MHIFQKWRWVVLSFLALHAAVTYSSEPVPRGIPGNVANNIEILVLQARQYEHGEGVPQDRKKAVELYCQAARLGSAEGQY
ALGWMYANGRGVERNDSIAASLFEMAAARGHTYAQKMLQFMPVPANPKIQLPDCLNKNIYARAKATPNKYYVNQSVSVLV
EKLAPQYEIDPGLVLAVISVESGFNVQAVSPRNAQGLMQLIPETAERFQVKDAFDAEDNIKGGMAYLRWLLAFFKGDVAL
VAAAYNAGEGAVEKYRGIPPYPETVKYVNKILSRYNKTTHPYQPGVVSRASFIFTSVAAE

Sequences:

>Translated_300_residues
MHIFQKWRWVVLSFLALHAAVTYSSEPVPRGIPGNVANNIEILVLQARQYEHGEGVPQDRKKAVELYCQAARLGSAEGQY
ALGWMYANGRGVERNDSIAASLFEMAAARGHTYAQKMLQFMPVPANPKIQLPDCLNKNIYARAKATPNKYYVNQSVSVLV
EKLAPQYEIDPGLVLAVISVESGFNVQAVSPRNAQGLMQLIPETAERFQVKDAFDAEDNIKGGMAYLRWLLAFFKGDVAL
VAAAYNAGEGAVEKYRGIPPYPETVKYVNKILSRYNKTTHPYQPGVVSRASFIFTSVAAE
>Mature_300_residues
MHIFQKWRWVVLSFLALHAAVTYSSEPVPRGIPGNVANNIEILVLQARQYEHGEGVPQDRKKAVELYCQAARLGSAEGQY
ALGWMYANGRGVERNDSIAASLFEMAAARGHTYAQKMLQFMPVPANPKIQLPDCLNKNIYARAKATPNKYYVNQSVSVLV
EKLAPQYEIDPGLVLAVISVESGFNVQAVSPRNAQGLMQLIPETAERFQVKDAFDAEDNIKGGMAYLRWLLAFFKGDVAL
VAAAYNAGEGAVEKYRGIPPYPETVKYVNKILSRYNKTTHPYQPGVVSRASFIFTSVAAE

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 33219; Mature: 33219

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIFQKWRWVVLSFLALHAAVTYSSEPVPRGIPGNVANNIEILVLQARQYEHGEGVPQDR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHH
KKAVELYCQAARLGSAEGQYALGWMYANGRGVERNDSIAASLFEMAAARGHTYAQKMLQF
HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
MPVPANPKIQLPDCLNKNIYARAKATPNKYYVNQSVSVLVEKLAPQYEIDPGLVLAVISV
CCCCCCCCEECHHHCCCCEEEEECCCCCEEEECHHHHHHHHHHCCCCCCCCCEEEEEEEE
ESGFNVQAVSPRNAQGLMQLIPETAERFQVKDAFDAEDNIKGGMAYLRWLLAFFKGDVAL
CCCCCEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
VAAAYNAGEGAVEKYRGIPPYPETVKYVNKILSRYNKTTHPYQPGVVSRASFIFTSVAAE
EEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHIFQKWRWVVLSFLALHAAVTYSSEPVPRGIPGNVANNIEILVLQARQYEHGEGVPQDR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHH
KKAVELYCQAARLGSAEGQYALGWMYANGRGVERNDSIAASLFEMAAARGHTYAQKMLQF
HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
MPVPANPKIQLPDCLNKNIYARAKATPNKYYVNQSVSVLVEKLAPQYEIDPGLVLAVISV
CCCCCCCCEECHHHCCCCEEEEECCCCCEEEECHHHHHHHHHHCCCCCCCCCEEEEEEEE
ESGFNVQAVSPRNAQGLMQLIPETAERFQVKDAFDAEDNIKGGMAYLRWLLAFFKGDVAL
CCCCCEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
VAAAYNAGEGAVEKYRGIPPYPETVKYVNKILSRYNKTTHPYQPGVVSRASFIFTSVAAE
EEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]