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The map label for this gene is 114330646

Identifier: 114330646

GI number: 114330646

Start: 642953

End: 643879

Strand: Direct

Name: 114330646

Synonym: Neut_0631

Alternate gene names: NA

Gene position: 642953-643879 (Clockwise)

Preceding gene: 114330644

Following gene: 114330647

Centisome position: 24.16

GC content: 47.57

Gene sequence:

>927_bases
GTGCGTCGAGCGATACAAAATAGTCAAGAGAGTCTGAATGTTCTGGCCAAGCGGCATGGGATTAATCCAAAAACGGTAGC
GAAGTGGCGGAAGCGGGAATTCACCCACGATGCACCGATGGGCCCCAAAGAATCGCACTCGACCGTTTTAAGTCTGGAAG
AAGAAGCTGCTGTTGTGGCGTTTCGCAAACATACGCTTCTACCGCTGGATGATTGTCTATATGCCTTGCAGCCAAGCATT
GCGCATTTGACCCGCTCAAGCCTGCATCGCTGCTTTCAACGGCATGGCATCAGTCGGTTGCCGGATGCTGATGGCGACAA
GCCAAAGAAAAAGTTTAATGCCTATCCAATTGGCTACTTCCATATTGATATTGCCGAAGTTCGTACGAAGGAAGGTAAAC
TCTATCTTTTTGTAGCCATTGACCGGACATCAAAGTTCATTTTTGTTCAACTTCAGAACAAAGCCAACCGCAACACGGCA
ACCGCCTTCTTGAAGGCCGTGATCGAGACTGTTCCCTACAAGATCCATACAATCCTGACTGATAACGGTATCCAGTTTAC
GTTCCCGGCGCGTTATCGGAATGGGCCATCGGCTCAGTATGTAACGCATATGTTCGATAGGTGTTGTCAGATCAACGACA
TCGAGCACCGTCTCACCAAACCCAACTGTCCCTGGACCAATGGTCAGGTTGAACGCATGAATCGAACCATCAAGGATGCG
ACTGTAAAACGGTATTATTACGACTCACACGATCAGTTGAAGGCCCATCTCCATCGCTTTGTGATGGCTTATAACTTCGC
CAAAAGACTAAAAGCTCTCAAAGGCCTAACACCCTATGAATACATCTGCAAAATCTGGAAAAATGAGCCAGATCGTTTTA
TCTTTGATCCATTCCAGCACACCGTGGGACTAAACAACCTAGGCTAA

Upstream 100 bases:

>100_bases
GTTGTTTAGTCCCACGGTGTGCCGGTGTAACATATAACCAGCTACGGAGGGATGATTTATGGGACAGATATTACACGGAA
GCGCCCGCACGACAGTGGCG

Downstream 100 bases:

>100_bases
CTCCAATTTTATTGGATCTGAGGAGTTCAAGATGCAATCTGTCAATACGCTGGAAGCAAAATCTTCATTGTCTCGTTTGG
TGGATGCCATTGAACAGGGA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Integrase; Integrase Catalytic Domain-Containing Protein; Transcriptional Regulator; Integrase Protein; Integrase Catalytic Core; Fis Family Transcriptional Regulator; Instegrase; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Transposase For ISMyma; Hypothethical Protein Transposase; Transposase Of

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSI
AHLTRSSLHRCFQRHGISRLPDADGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLYLFVAIDRTSKFIFVQLQNKANRNTA
TAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPSAQYVTHMFDRCCQINDIEHRLTKPNCPWTNGQVERMNRTIKDA
TVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNNLG

Sequences:

>Translated_308_residues
MRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSI
AHLTRSSLHRCFQRHGISRLPDADGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLYLFVAIDRTSKFIFVQLQNKANRNTA
TAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPSAQYVTHMFDRCCQINDIEHRLTKPNCPWTNGQVERMNRTIKDA
TVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNNLG
>Mature_308_residues
MRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVAFRKHTLLPLDDCLYALQPSI
AHLTRSSLHRCFQRHGISRLPDADGDKPKKKFNAYPIGYFHIDIAEVRTKEGKLYLFVAIDRTSKFIFVQLQNKANRNTA
TAFLKAVIETVPYKIHTILTDNGIQFTFPARYRNGPSAQYVTHMFDRCCQINDIEHRLTKPNCPWTNGQVERMNRTIKDA
TVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQHTVGLNNLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35804; Mature: 35804

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVA
CCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHEE
FRKHTLLPLDDCLYALQPSIAHLTRSSLHRCFQRHGISRLPDADGDKPKKKFNAYPIGYF
ECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEE
HIDIAEVRTKEGKLYLFVAIDRTSKFIFVQLQNKANRNTATAFLKAVIETVPYKIHTILT
EEEHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEE
DNGIQFTFPARYRNGPSAQYVTHMFDRCCQINDIEHRLTKPNCPWTNGQVERMNRTIKDA
CCCEEEEECHHHCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHH
TVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQH
HHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCHHH
TVGLNNLG
HCCCCCCC
>Mature Secondary Structure
MRRAIQNSQESLNVLAKRHGINPKTVAKWRKREFTHDAPMGPKESHSTVLSLEEEAAVVA
CCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHEE
FRKHTLLPLDDCLYALQPSIAHLTRSSLHRCFQRHGISRLPDADGDKPKKKFNAYPIGYF
ECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEEE
HIDIAEVRTKEGKLYLFVAIDRTSKFIFVQLQNKANRNTATAFLKAVIETVPYKIHTILT
EEEHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEEEE
DNGIQFTFPARYRNGPSAQYVTHMFDRCCQINDIEHRLTKPNCPWTNGQVERMNRTIKDA
CCCEEEEECHHHCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHH
TVKRYYYDSHDQLKAHLHRFVMAYNFAKRLKALKGLTPYEYICKIWKNEPDRFIFDPFQH
HHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEECCHHH
TVGLNNLG
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA