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The map label for this gene is secY [H]

Identifier: 114330593

GI number: 114330593

Start: 589396

End: 590718

Strand: Direct

Name: secY [H]

Synonym: Neut_0578

Alternate gene names: 114330593

Gene position: 589396-590718 (Clockwise)

Preceding gene: 114330592

Following gene: 114330594

Centisome position: 22.15

GC content: 38.17

Gene sequence:

>1323_bases
ATGGTATCTAAATCAAAAGCTGCTTTGTCTGATAGATTCTATGATTTAAAAAAGCGATTGTGGTTTTTGCTGCTTGCTTT
GATTGTGTATCGCATTGGTACACATGTTCCCGTTCCTGGAATTGATTCGGTTGTATTAAAAGATCTTTTTAACTCCCAGG
AAGGTGGAATACTGGGAATGTTTAATATGTTTTCGGGAGGGGCTCTTTCAAGATTTTCCATATTTGCACTTGGAATTATG
CCCTATATATCGGCATCTATTATTATGCAACTTGGAACAGTAGCTGTTCCATATTTGGAATCTTTGAAAAAGGAAGGTGA
GTCAGGCAGGAAAAAGATAACGCAATACACTCGTTACGGTACACTGCTACTTTCTACATTACAAAGCTATGGAATTTCCT
TTGCCTTGCAATCACAGCCTGGCTTAGTGGTGGAGCCAGGAATGCATTTTATATTTACAACAATCATTACGCTTGTAACT
GGATCCATATTCCTCATGTGGCTTGGAGAGCAAATCACAGAGCGCGGAATTGGGAACGGAATTTCTTTGATAATTTTTGC
TGGAATAGCAGCTGGATTTCCAAGTGCTGTTGGGGGGACTCTTGAGCTGGTAAATACGGGCGCAATGCATTTTTTTACTG
CCTTATTTATTTTTATTGCAGCTATAGCTATTACAGCGCTGGTTGTCTTTATAGAGCGTGGCCAACGGAAAATATTGGTA
AACTACGCAAAAAGGCAGGTAGGTAAGCAGATGATGGGTGGCCAATCATCTCATTTGCCTCTAAAGTTAAATATGTCTGG
AGTTATACCTCCAATATTTGCTTCCAGTATTATTTTATTTCCCGCAACTTTAGCTGGTTGGTTTTCTGACAGTCTGTCTC
TAAATTGGTTAAAAGACTTTAGTAATACGTTGGCACCTGGGCAGCCTATTTATGTCGCTTTATATGCTGCATTGATCATA
TTTTTTTGTTTTTTCTATACTGCACTCGTATTTAATCCAAAGGAAACGGCAGATAATCTGAAAAAAAGTGGGGCTTTTAT
ACCTGGAATACGTCCAGGTGACCAAACTACGAAATATATAGAGCGTATTATGTTGAGGTTAACATTAATTGGTTCAATTT
ATGTCACGCTAGTTTGCCTGTTACCTGAGTTTATGATTTTGAAATGGAATGTTCCATTTTATTTTGGAGGAACTTCGCTG
CTAATAATTGTCGTGGTTACCATGGATTTTATGGCTCAAGTTCAATCTCATGTGATGTCAGGTCAATATGAGAGTCTGTT
GAAGAAAGCTAACTTTAAAACCAGTGGTAACTTTTTACGATAG

Upstream 100 bases:

>100_bases
ACACGAGCCATAAGGCTAAAAGATTTAAGAGTAACTCGAGGTGTCAAAGATATAGTAGAGCACGCGGGTGGTCAGGTTGA
GTTAACTATAGAAGATGTAA

Downstream 100 bases:

>100_bases
TTGGGTTGTGATGGCAAAAGAAGAAACTATACAAATGCAAGGAGAGGTTATTGAAACGCTTCCAAATGCAACGTTCAGAA
TAAAATTAGAGAATGGCCAT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MVSKSKAALSDRFYDLKKRLWFLLLALIVYRIGTHVPVPGIDSVVLKDLFNSQEGGILGMFNMFSGGALSRFSIFALGIM
PYISASIIMQLGTVAVPYLESLKKEGESGRKKITQYTRYGTLLLSTLQSYGISFALQSQPGLVVEPGMHFIFTTIITLVT
GSIFLMWLGEQITERGIGNGISLIIFAGIAAGFPSAVGGTLELVNTGAMHFFTALFIFIAAIAITALVVFIERGQRKILV
NYAKRQVGKQMMGGQSSHLPLKLNMSGVIPPIFASSIILFPATLAGWFSDSLSLNWLKDFSNTLAPGQPIYVALYAALII
FFCFFYTALVFNPKETADNLKKSGAFIPGIRPGDQTTKYIERIMLRLTLIGSIYVTLVCLLPEFMILKWNVPFYFGGTSL
LIIVVVTMDFMAQVQSHVMSGQYESLLKKANFKTSGNFLR

Sequences:

>Translated_440_residues
MVSKSKAALSDRFYDLKKRLWFLLLALIVYRIGTHVPVPGIDSVVLKDLFNSQEGGILGMFNMFSGGALSRFSIFALGIM
PYISASIIMQLGTVAVPYLESLKKEGESGRKKITQYTRYGTLLLSTLQSYGISFALQSQPGLVVEPGMHFIFTTIITLVT
GSIFLMWLGEQITERGIGNGISLIIFAGIAAGFPSAVGGTLELVNTGAMHFFTALFIFIAAIAITALVVFIERGQRKILV
NYAKRQVGKQMMGGQSSHLPLKLNMSGVIPPIFASSIILFPATLAGWFSDSLSLNWLKDFSNTLAPGQPIYVALYAALII
FFCFFYTALVFNPKETADNLKKSGAFIPGIRPGDQTTKYIERIMLRLTLIGSIYVTLVCLLPEFMILKWNVPFYFGGTSL
LIIVVVTMDFMAQVQSHVMSGQYESLLKKANFKTSGNFLR
>Mature_440_residues
MVSKSKAALSDRFYDLKKRLWFLLLALIVYRIGTHVPVPGIDSVVLKDLFNSQEGGILGMFNMFSGGALSRFSIFALGIM
PYISASIIMQLGTVAVPYLESLKKEGESGRKKITQYTRYGTLLLSTLQSYGISFALQSQPGLVVEPGMHFIFTTIITLVT
GSIFLMWLGEQITERGIGNGISLIIFAGIAAGFPSAVGGTLELVNTGAMHFFTALFIFIAAIAITALVVFIERGQRKILV
NYAKRQVGKQMMGGQSSHLPLKLNMSGVIPPIFASSIILFPATLAGWFSDSLSLNWLKDFSNTLAPGQPIYVALYAALII
FFCFFYTALVFNPKETADNLKKSGAFIPGIRPGDQTTKYIERIMLRLTLIGSIYVTLVCLLPEFMILKWNVPFYFGGTSL
LIIVVVTMDFMAQVQSHVMSGQYESLLKKANFKTSGNFLR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=426, Percent_Identity=65.2582159624413, Blast_Score=531, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48422; Mature: 48422

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSKSKAALSDRFYDLKKRLWFLLLALIVYRIGTHVPVPGIDSVVLKDLFNSQEGGILGM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEE
FNMFSGGALSRFSIFALGIMPYISASIIMQLGTVAVPYLESLKKEGESGRKKITQYTRYG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TLLLSTLQSYGISFALQSQPGLVVEPGMHFIFTTIITLVTGSIFLMWLGEQITERGIGNG
HHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ISLIIFAGIAAGFPSAVGGTLELVNTGAMHFFTALFIFIAAIAITALVVFIERGQRKILV
HHHHHHHHHHHCCCHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
NYAKRQVGKQMMGGQSSHLPLKLNMSGVIPPIFASSIILFPATLAGWFSDSLSLNWLKDF
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SNTLAPGQPIYVALYAALIIFFCFFYTALVFNPKETADNLKKSGAFIPGIRPGDQTTKYI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
ERIMLRLTLIGSIYVTLVCLLPEFMILKWNVPFYFGGTSLLIIVVVTMDFMAQVQSHVMS
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHC
GQYESLLKKANFKTSGNFLR
CHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVSKSKAALSDRFYDLKKRLWFLLLALIVYRIGTHVPVPGIDSVVLKDLFNSQEGGILGM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEE
FNMFSGGALSRFSIFALGIMPYISASIIMQLGTVAVPYLESLKKEGESGRKKITQYTRYG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TLLLSTLQSYGISFALQSQPGLVVEPGMHFIFTTIITLVTGSIFLMWLGEQITERGIGNG
HHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ISLIIFAGIAAGFPSAVGGTLELVNTGAMHFFTALFIFIAAIAITALVVFIERGQRKILV
HHHHHHHHHHHCCCHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
NYAKRQVGKQMMGGQSSHLPLKLNMSGVIPPIFASSIILFPATLAGWFSDSLSLNWLKDF
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SNTLAPGQPIYVALYAALIIFFCFFYTALVFNPKETADNLKKSGAFIPGIRPGDQTTKYI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
ERIMLRLTLIGSIYVTLVCLLPEFMILKWNVPFYFGGTSLLIIVVVTMDFMAQVQSHVMS
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHC
GQYESLLKKANFKTSGNFLR
CHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]