| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is pilQ [H]
Identifier: 114330532
GI number: 114330532
Start: 532148
End: 534451
Strand: Direct
Name: pilQ [H]
Synonym: Neut_0513
Alternate gene names: 114330532
Gene position: 532148-534451 (Clockwise)
Preceding gene: 114330531
Following gene: 114330533
Centisome position: 20.0
GC content: 49.91
Gene sequence:
>2304_bases ATGAATAGAGGGAGAAATTTTTTTGTGCTGCTGCTATTGTGTGTATTGATCACCGGTTGTGCAACACAAATGACACGAAA CCCCTCCTTCCTGGAAGGAAAACAGCTGATCGCGGAAGGTCGGCTGGAAGAAGGATTGAGCAAGCTGGAGCAAGCTGCGC GCGAGGAACCAGATAACAGGGAAGTGAGTGCGACTCTGGCCAGAGAACGTGATTCCATCATTGGCCAGATTTTATTCGAG GCAGATGGCTTCCGGATGGCAGGCAATTTGGAGCAGGCGGAGCTGGATTATCAACGAGTCCTGGGTGTCAGTGTCAATAA TGAACGTGCCCGGGAAGGATTGGAAGCAGTTGAGCTGGAGCGCCGTCATATTGTGCTGGTGAATCAGGCAAAAGAAGCGC TTGCGCATCATGACGTGGAAGGTGCGGAAAAAATCGTAAGAGGGGTACTGGCAAATAATCCCATGCAATCCGAAGCCAGG CAGCTGATCAAGGCGCTTAGTGAACGGATTGCACGGGCCGAGACATCCGAATTATCCCTGATCTCCGAGTTCAGCAAGCC AATTACCATGGAGTTTCGTGATACATCACTAAAAGCCATATTTGAACTTATTTCCCGCACGGCTGGTATCAATTTTGTGT TTGATCGCAATGTTCAGCAGGAAGCAACGGCTTCGATGTTTGTACGGGACAATTCCATTGAAGATGTGCTGAAATTGTTG CTTCTGACCAACCAGCTCGCTTATAAGGTGTTAAACAGCAACACGCTGTTGATTTATCCGGATACGCCGGCCAAGCAAAA AGATTATCAGGAGCTGGTAGTGCGCAGCTTCCATGTCGCTAATACCGATGTCAAACAGATGGTGGCTATGATCCGTGGGC TGGTCAAGGCGCGTGATATCTACGTTAACGAAAAACTCAACCTGTTTGTGATCAGAGATACGCTGGAGATGATCCGGTTA GTGGAACGCCTGGTTGCAATCAATGATTTTCCTGATCCCGAGGTGATGCTGGATGTGGTTGTATTGGAAGTGAAGCGTGA TAACACACTGGAGCTGGGGCCGAATATGCCTACTTCGGTGACATTCAGCGCCATCCCTGGAGTGGGTGCACCTGCCCAGG CGGCAGCTGATTCCGTGGTGAAAATGAGCATGATCAAGAATGCGGGATTTGAAGGTCTGCGGAGTTTTACCATTAGTAAT CAGGCAAAAATTGATTTTGGCAGAACGCTGACTAACGCGGATGTGCTGGCCAATCCCCGTATTCGCGTTAAAAGTCGGGA AAAGGCAAAAATCCATATCGGCAACAAGGAGCCGGTGTTCACCGTGACCAATACCGCCAATGTCGGGTCGGCTGCTTCAG CGACTTATATTGATGTCGGATTGAAATTCGAGGTTGAACCAGTCGTTAGAACCAACAATGAGGTAACACTGAAAGCATTG CTGGAGGTCAGTAGTAATCTGGGCGAGAAGAGATCCGGAGGGGGAGATAATGCGGCCACAGCCATTGTCATCGGTACACG CACTGCGGAAACAGTGTTGGAATTGCGCGATGGGGAAACACAGGTACTTGCCGGATTGATTCAGGACGATCTGAGCCGGG TAAAATCGGGTATCGCTGGACTGACCGAGATTCCGATACTGGGGGATATTTTTTCCAAGCAGGTCAGGAAACATAATAAA ACCGAAATAATTTTGCTGATCACACCGCATATTATTCGTAATGTCGTTCAGCCCAACCATTTTGAGAGTGAATTTTATTC CGGTACAGCCAGCGCTGCCGGAAAACTTCCTGTTACTATCCGGAAAACGGCTCCGCAATCACTAGCCATGGAATCCTCAG GCAGCGCTTCAGTCGGTGGTGGCTATGCCGCATTTGGCCAGGCGGCACGATCTGCCGGATTGCTCGGCACGGAATCTGAT CCGTTTGAAGAAGCTATCACCCAGGCAGGAAGTGTTGCGTCACCTTCGCTGACATTGCGGGCACCGGAAAGCGTGACAAT GGGACGGGAATTTACCACTACTGTCAGGCTGGTGACACAGGATTCCATGCTGTCCGGTGAGTTGAACCTGATCTATGATC CGGAGGCGCTGGAGTTGATAGATGGCGGAGAAAAATCCGGCATGCGCAACCTGAAATTTGGACGGGATCAACCTACTGGA ATGACGGCAGTATTACGTTTCAAGGTGATTAGTACAAATCCGGGTTCAACCGAAATCGCGTTACAGAATCTGCAGGTGCG AGATGAAACCGGACAGGCGATTGAAGTGGACGTGCCACCGACAGCAACTATCCGGATTCAATAA
Upstream 100 bases:
>100_bases GGATTGGTCGGATTCAGGAGGATGCAGTTGAACTGATTTATCTTCCCTTGGGTGTCAGGCAAACACTGCTTATCAATTAG AGCTGTCCATAAAGGGTGTC
Downstream 100 bases:
>100_bases AGGTATCTCTGAAAACGATCGTGCAAAAAGTGTTTCCAGAAAACTGTCATTTTCAGGCTTGTCGAGGTTTTACGCTGGTT GAACTAATGGTTGTGGTGGT
Product: type II and III secretion system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 767; Mature: 767
Protein sequence:
>767_residues MNRGRNFFVLLLLCVLITGCATQMTRNPSFLEGKQLIAEGRLEEGLSKLEQAAREEPDNREVSATLARERDSIIGQILFE ADGFRMAGNLEQAELDYQRVLGVSVNNERAREGLEAVELERRHIVLVNQAKEALAHHDVEGAEKIVRGVLANNPMQSEAR QLIKALSERIARAETSELSLISEFSKPITMEFRDTSLKAIFELISRTAGINFVFDRNVQQEATASMFVRDNSIEDVLKLL LLTNQLAYKVLNSNTLLIYPDTPAKQKDYQELVVRSFHVANTDVKQMVAMIRGLVKARDIYVNEKLNLFVIRDTLEMIRL VERLVAINDFPDPEVMLDVVVLEVKRDNTLELGPNMPTSVTFSAIPGVGAPAQAAADSVVKMSMIKNAGFEGLRSFTISN QAKIDFGRTLTNADVLANPRIRVKSREKAKIHIGNKEPVFTVTNTANVGSAASATYIDVGLKFEVEPVVRTNNEVTLKAL LEVSSNLGEKRSGGGDNAATAIVIGTRTAETVLELRDGETQVLAGLIQDDLSRVKSGIAGLTEIPILGDIFSKQVRKHNK TEIILLITPHIIRNVVQPNHFESEFYSGTASAAGKLPVTIRKTAPQSLAMESSGSASVGGGYAAFGQAARSAGLLGTESD PFEEAITQAGSVASPSLTLRAPESVTMGREFTTTVRLVTQDSMLSGELNLIYDPEALELIDGGEKSGMRNLKFGRDQPTG MTAVLRFKVISTNPGSTEIALQNLQVRDETGQAIEVDVPPTATIRIQ
Sequences:
>Translated_767_residues MNRGRNFFVLLLLCVLITGCATQMTRNPSFLEGKQLIAEGRLEEGLSKLEQAAREEPDNREVSATLARERDSIIGQILFE ADGFRMAGNLEQAELDYQRVLGVSVNNERAREGLEAVELERRHIVLVNQAKEALAHHDVEGAEKIVRGVLANNPMQSEAR QLIKALSERIARAETSELSLISEFSKPITMEFRDTSLKAIFELISRTAGINFVFDRNVQQEATASMFVRDNSIEDVLKLL LLTNQLAYKVLNSNTLLIYPDTPAKQKDYQELVVRSFHVANTDVKQMVAMIRGLVKARDIYVNEKLNLFVIRDTLEMIRL VERLVAINDFPDPEVMLDVVVLEVKRDNTLELGPNMPTSVTFSAIPGVGAPAQAAADSVVKMSMIKNAGFEGLRSFTISN QAKIDFGRTLTNADVLANPRIRVKSREKAKIHIGNKEPVFTVTNTANVGSAASATYIDVGLKFEVEPVVRTNNEVTLKAL LEVSSNLGEKRSGGGDNAATAIVIGTRTAETVLELRDGETQVLAGLIQDDLSRVKSGIAGLTEIPILGDIFSKQVRKHNK TEIILLITPHIIRNVVQPNHFESEFYSGTASAAGKLPVTIRKTAPQSLAMESSGSASVGGGYAAFGQAARSAGLLGTESD PFEEAITQAGSVASPSLTLRAPESVTMGREFTTTVRLVTQDSMLSGELNLIYDPEALELIDGGEKSGMRNLKFGRDQPTG MTAVLRFKVISTNPGSTEIALQNLQVRDETGQAIEVDVPPTATIRIQ >Mature_767_residues MNRGRNFFVLLLLCVLITGCATQMTRNPSFLEGKQLIAEGRLEEGLSKLEQAAREEPDNREVSATLARERDSIIGQILFE ADGFRMAGNLEQAELDYQRVLGVSVNNERAREGLEAVELERRHIVLVNQAKEALAHHDVEGAEKIVRGVLANNPMQSEAR QLIKALSERIARAETSELSLISEFSKPITMEFRDTSLKAIFELISRTAGINFVFDRNVQQEATASMFVRDNSIEDVLKLL LLTNQLAYKVLNSNTLLIYPDTPAKQKDYQELVVRSFHVANTDVKQMVAMIRGLVKARDIYVNEKLNLFVIRDTLEMIRL VERLVAINDFPDPEVMLDVVVLEVKRDNTLELGPNMPTSVTFSAIPGVGAPAQAAADSVVKMSMIKNAGFEGLRSFTISN QAKIDFGRTLTNADVLANPRIRVKSREKAKIHIGNKEPVFTVTNTANVGSAASATYIDVGLKFEVEPVVRTNNEVTLKAL LEVSSNLGEKRSGGGDNAATAIVIGTRTAETVLELRDGETQVLAGLIQDDLSRVKSGIAGLTEIPILGDIFSKQVRKHNK TEIILLITPHIIRNVVQPNHFESEFYSGTASAAGKLPVTIRKTAPQSLAMESSGSASVGGGYAAFGQAARSAGLLGTESD PFEEAITQAGSVASPSLTLRAPESVTMGREFTTTVRLVTQDSMLSGELNLIYDPEALELIDGGEKSGMRNLKFGRDQPTG MTAVLRFKVISTNPGSTEIALQNLQVRDETGQAIEVDVPPTATIRIQ
Specific function: Required for type IV pilus biogenesis and competence. Could function as a pore for exit of the pilus but also as a channel for entry of heme and antimicrobial agents and uptake of transforming DNA [H]
COG id: COG4796
COG function: function code U; Type II secretory pathway, component HofQ
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP D family [H]
Homologues:
Organism=Escherichia coli, GI1789793, Length=414, Percent_Identity=21.9806763285024, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001775 - InterPro: IPR005644 - InterPro: IPR013355 - InterPro: IPR011662 - InterPro: IPR004846 - InterPro: IPR004845 [H]
Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N; PF07660 STN [H]
EC number: NA
Molecular weight: Translated: 83725; Mature: 83725
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRGRNFFVLLLLCVLITGCATQMTRNPSFLEGKQLIAEGRLEEGLSKLEQAAREEPDNR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EVSATLARERDSIIGQILFEADGFRMAGNLEQAELDYQRVLGVSVNNERAREGLEAVELE HHHHHHHHHHHHHHHHHHEECCCCEEECCCCHHHHHHHHHEECCCCCHHHHCCHHHHHHC RRHIVLVNQAKEALAHHDVEGAEKIVRGVLANNPMQSEARQLIKALSERIARAETSELSL CCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH ISEFSKPITMEFRDTSLKAIFELISRTAGINFVFDRNVQQEATASMFVRDNSIEDVLKLL HHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHEEECCCHHHHHHHH LLTNQLAYKVLNSNTLLIYPDTPAKQKDYQELVVRSFHVANTDVKQMVAMIRGLVKARDI HHHHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHE YVNEKLNLFVIRDTLEMIRLVERLVAINDFPDPEVMLDVVVLEVKRDNTLELGPNMPTSV EECCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEEECCCEEEECCCCCCCE TFSAIPGVGAPAQAAADSVVKMSMIKNAGFEGLRSFTISNQAKIDFGRTLTNADVLANPR EEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCEEECCCEECCCCCCCCCC IRVKSREKAKIHIGNKEPVFTVTNTANVGSAASATYIDVGLKFEVEPVVRTNNEVTLKAL EEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCEECCCCCHHHHH LEVSSNLGEKRSGGGDNAATAIVIGTRTAETVLELRDGETQVLAGLIQDDLSRVKSGIAG HHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC LTEIPILGDIFSKQVRKHNKTEIILLITPHIIRNVVQPNHFESEFYSGTASAAGKLPVTI CCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEE RKTAPQSLAMESSGSASVGGGYAAFGQAARSAGLLGTESDPFEEAITQAGSVASPSLTLR ECCCCHHHEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEE APESVTMGREFTTTVRLVTQDSMLSGELNLIYDPEALELIDGGEKSGMRNLKFGRDQPTG CCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCHHHEECCCCCCCCCCCCCCCCCCCC MTAVLRFKVISTNPGSTEIALQNLQVRDETGQAIEVDVPPTATIRIQ CEEEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEECCCCEEEEEC >Mature Secondary Structure MNRGRNFFVLLLLCVLITGCATQMTRNPSFLEGKQLIAEGRLEEGLSKLEQAAREEPDNR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EVSATLARERDSIIGQILFEADGFRMAGNLEQAELDYQRVLGVSVNNERAREGLEAVELE HHHHHHHHHHHHHHHHHHEECCCCEEECCCCHHHHHHHHHEECCCCCHHHHCCHHHHHHC RRHIVLVNQAKEALAHHDVEGAEKIVRGVLANNPMQSEARQLIKALSERIARAETSELSL CCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH ISEFSKPITMEFRDTSLKAIFELISRTAGINFVFDRNVQQEATASMFVRDNSIEDVLKLL HHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHEEECCCHHHHHHHH LLTNQLAYKVLNSNTLLIYPDTPAKQKDYQELVVRSFHVANTDVKQMVAMIRGLVKARDI HHHHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHE YVNEKLNLFVIRDTLEMIRLVERLVAINDFPDPEVMLDVVVLEVKRDNTLELGPNMPTSV EECCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEEECCCEEEECCCCCCCE TFSAIPGVGAPAQAAADSVVKMSMIKNAGFEGLRSFTISNQAKIDFGRTLTNADVLANPR EEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCEEECCCEECCCCCCCCCC IRVKSREKAKIHIGNKEPVFTVTNTANVGSAASATYIDVGLKFEVEPVVRTNNEVTLKAL EEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCEECCCCCHHHHH LEVSSNLGEKRSGGGDNAATAIVIGTRTAETVLELRDGETQVLAGLIQDDLSRVKSGIAG HHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC LTEIPILGDIFSKQVRKHNKTEIILLITPHIIRNVVQPNHFESEFYSGTASAAGKLPVTI CCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEE RKTAPQSLAMESSGSASVGGGYAAFGQAARSAGLLGTESDPFEEAITQAGSVASPSLTLR ECCCCHHHEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEE APESVTMGREFTTTVRLVTQDSMLSGELNLIYDPEALELIDGGEKSGMRNLKFGRDQPTG CCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCHHHEECCCCCCCCCCCCCCCCCCCC MTAVLRFKVISTNPGSTEIALQNLQVRDETGQAIEVDVPPTATIRIQ CEEEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]